RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 SNAP25P60880 206 aa26.22■■□□□ 1.79
GPCPD1-206ENST00000481690 CWC27Q6UX04 472 aaKnown RBP26.22■■□□□ 1.79
GPCPD1-206ENST00000481690 FERMT2Q96AC1 680 aa26.22■■□□□ 1.79
GPCPD1-206ENST00000481690 AGBL1Q96MI9 1066 aa26.22■■□□□ 1.79
GPCPD1-206ENST00000481690 ACAD9Q9H845 621 aa26.22■■□□□ 1.79
GPCPD1-206ENST00000481690 RANBP2P49792 3224 aaKnown RBP26.22■■□□□ 1.79
GPCPD1-206ENST00000481690 PGK1P00558 417 aa26.21■■□□□ 1.79
GPCPD1-206ENST00000481690 MDM2Q00987 491 aaPredicted RBP26.21■■□□□ 1.79
GPCPD1-206ENST00000481690 SLC39A5Q6ZMH5 540 aa26.21■■□□□ 1.79
GPCPD1-206ENST00000481690 MFSD6Q6ZSS7 791 aa26.21■■□□□ 1.79
GPCPD1-206ENST00000481690 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.21■■□□□ 1.79
GPCPD1-206ENST00000481690 RNF146Q9NTX7 359 aa26.21■■□□□ 1.79
GPCPD1-206ENST00000481690 PRR12Q9ULL5 1215 aa26.21■■□□□ 1.79
GPCPD1-206ENST00000481690 LTBP2Q14767 1821 aa26.21■■□□□ 1.79
GPCPD1-206ENST00000481690 ZNF536O15090 1300 aa26.2■■□□□ 1.79
GPCPD1-206ENST00000481690 PLA2G6O60733 806 aa26.2■■□□□ 1.78
GPCPD1-206ENST00000481690 SNAI1O95863 264 aaPredicted RBP26.2■■□□□ 1.78
GPCPD1-206ENST00000481690 ALAS1P13196 640 aa26.2■■□□□ 1.78
GPCPD1-206ENST00000481690 NOVP48745 357 aa26.2■■□□□ 1.78
GPCPD1-206ENST00000481690 AKNAD1Q5T1N1 836 aa26.2■■□□□ 1.78
GPCPD1-206ENST00000481690 MAMDC4Q6UXC1 1216 aa26.2■■□□□ 1.78
GPCPD1-206ENST00000481690 ZNF467Q7Z7K2 595 aaPredicted RBP26.2■■□□□ 1.78
GPCPD1-206ENST00000481690 RNF180Q86T96 592 aa26.2■■□□□ 1.78
GPCPD1-206ENST00000481690 TBC1D10CQ8IV04 446 aa26.2■■□□□ 1.78
GPCPD1-206ENST00000481690 DCAF4Q8WV16 495 aa26.2■■□□□ 1.78
GPCPD1-206ENST00000481690 PRKAG2Q9UGJ0 569 aa26.2■■□□□ 1.78
GPCPD1-206ENST00000481690 SOX1O00570 391 aaPredicted RBP26.19■■□□□ 1.78
GPCPD1-206ENST00000481690 TOP1P11387 765 aaKnown RBP26.19■■□□□ 1.78
GPCPD1-206ENST00000481690 TMEM47Q9BQJ4 181 aa26.19■■□□□ 1.78
GPCPD1-206ENST00000481690 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.19■■□□□ 1.78
GPCPD1-206ENST00000481690 FAM184BQ9ULE4 1060 aa26.19■■□□□ 1.78
GPCPD1-206ENST00000481690 FRMPD2Q68DX3 1309 aaPredicted RBP26.18■■□□□ 1.78
GPCPD1-206ENST00000481690 HIP1O00291 1037 aa26.18■■□□□ 1.78
GPCPD1-206ENST00000481690 IRX6P78412 446 aaPredicted RBP26.18■■□□□ 1.78
GPCPD1-206ENST00000481690 TRIM60Q495X7 471 aa26.18■■□□□ 1.78
GPCPD1-206ENST00000481690 TDHQ8IZJ6 230 aa26.18■■□□□ 1.78
GPCPD1-206ENST00000481690 LRCH3Q96II8 777 aa26.18■■□□□ 1.78
GPCPD1-206ENST00000481690 FGD4Q96M96 766 aa26.18■■□□□ 1.78
GPCPD1-206ENST00000481690 TRERF1Q96PN7 1200 aa26.18■■□□□ 1.78
GPCPD1-206ENST00000481690 LBHD1Q9BQE6 289 aaPredicted RBP26.18■■□□□ 1.78
GPCPD1-206ENST00000481690 RNF41Q9H4P4 317 aaPredicted RBP26.18■■□□□ 1.78
GPCPD1-206ENST00000481690 POTEB2H3BUK9 544 aa26.17■■□□□ 1.78
GPCPD1-206ENST00000481690 SLC16A2P36021 539 aa26.17■■□□□ 1.78
GPCPD1-206ENST00000481690 CNTN2Q02246 1040 aa26.17■■□□□ 1.78
GPCPD1-206ENST00000481690 TKFCQ3LXA3 575 aa26.17■■□□□ 1.78
GPCPD1-206ENST00000481690 TTBK2Q6IQ55 1244 aa26.17■■□□□ 1.78
GPCPD1-206ENST00000481690 ARMCX2Q7L311 632 aa26.17■■□□□ 1.78
GPCPD1-206ENST00000481690 A1CFQ9NQ94 594 aaKnown RBP26.17■■□□□ 1.78
GPCPD1-206ENST00000481690 PRDM5Q9NQX1 630 aaPredicted RBP26.17■■□□□ 1.78
GPCPD1-206ENST00000481690 TCP11L1Q9NUJ3 509 aa26.17■■□□□ 1.78
GPCPD1-206ENST00000481690 CCPG1Q9ULG6 757 aa26.17■■□□□ 1.78
GPCPD1-206ENST00000481690 PHF24Q9UPV7 400 aa26.17■■□□□ 1.78
GPCPD1-206ENST00000481690 NEDD4P46934 1319 aa26.16■■□□□ 1.78
GPCPD1-206ENST00000481690 ZNF213O14771 459 aa26.16■■□□□ 1.78
GPCPD1-206ENST00000481690 PCP11498 1178 aaKnown RBP26.16■■□□□ 1.78
GPCPD1-206ENST00000481690 ACVR2BQ13705 512 aa26.16■■□□□ 1.78
GPCPD1-206ENST00000481690 GPCPD1Q9NPB8 672 aa26.16■■□□□ 1.78
GPCPD1-206ENST00000481690 SYNRGQ9UMZ2 1314 aa26.15■■□□□ 1.78
GPCPD1-206ENST00000481690 SNX17Q15036 470 aa26.15■■□□□ 1.78
GPCPD1-206ENST00000481690 CCDC144CPQ8IYA2 1237 aa26.15■■□□□ 1.78
GPCPD1-206ENST00000481690 ESR2Q92731 530 aa26.15■■□□□ 1.78
GPCPD1-206ENST00000481690 ABHD16BQ9H3Z7 469 aa26.15■■□□□ 1.78
GPCPD1-206ENST00000481690 LCTP09848 1927 aa26.15■■□□□ 1.78
GPCPD1-206ENST00000481690 DNAH12Q6ZR08 3092 aa26.15■■□□□ 1.78
GPCPD1-206ENST00000481690 LRRC37A2A6NM11 1700 aa26.14■■□□□ 1.78
GPCPD1-206ENST00000481690 ADAMTS4O75173 837 aa26.14■■□□□ 1.78
GPCPD1-206ENST00000481690 MUM1L1Q5H9M0 696 aa26.14■■□□□ 1.78
GPCPD1-206ENST00000481690 SYDE2Q5VT97 1194 aa26.14■■□□□ 1.78
GPCPD1-206ENST00000481690 FAM133AQ8N9E0 248 aa26.14■■□□□ 1.78
GPCPD1-206ENST00000481690 ZKSCAN3Q9BRR0 538 aa26.14■■□□□ 1.78
GPCPD1-206ENST00000481690 A0A1W2PQ45 241 aaPredicted RBP26.13■■□□□ 1.77
GPCPD1-206ENST00000481690 A0A1W2PQY0 241 aa26.13■■□□□ 1.77
GPCPD1-206ENST00000481690 NSMFQ6X4W1 530 aa26.13■■□□□ 1.77
GPCPD1-206ENST00000481690 RANBP17Q9H2T7 1088 aaKnown RBP26.13■■□□□ 1.77
GPCPD1-206ENST00000481690 ICAM1P05362 532 aa26.12■■□□□ 1.77
GPCPD1-206ENST00000481690 PDHBP11177 359 aa26.12■■□□□ 1.77
GPCPD1-206ENST00000481690 CCDC144BQ3MJ40 725 aa26.12■■□□□ 1.77
GPCPD1-206ENST00000481690 BTNL9Q6UXG8 535 aa26.12■■□□□ 1.77
GPCPD1-206ENST00000481690 TTC14Q96N46 770 aa26.12■■□□□ 1.77
GPCPD1-206ENST00000481690 SOWAHBA6NEL2 793 aa26.11■■□□□ 1.77
GPCPD1-206ENST00000481690 DUSP11O75319 330 aaKnown RBP26.11■■□□□ 1.77
GPCPD1-206ENST00000481690 PDE4AP27815 886 aa26.11■■□□□ 1.77
GPCPD1-206ENST00000481690 DSCC1Q9BVC3 393 aa26.11■■□□□ 1.77
GPCPD1-206ENST00000481690 PDLIM7Q9NR12 457 aa26.11■■□□□ 1.77
GPCPD1-206ENST00000481690 CYP39A1Q9NYL5 469 aa26.11■■□□□ 1.77
GPCPD1-206ENST00000481690 MYADML2A6NDP7 307 aa26.1■■□□□ 1.77
GPCPD1-206ENST00000481690 ASB14A6NK59 587 aa26.1■■□□□ 1.77
GPCPD1-206ENST00000481690 ADCY6O43306 1168 aa26.1■■□□□ 1.77
GPCPD1-206ENST00000481690 KDM4AO75164 1064 aa26.1■■□□□ 1.77
GPCPD1-206ENST00000481690 C6orf222P0C671 652 aaPredicted RBP26.1■■□□□ 1.77
GPCPD1-206ENST00000481690 ACLYP53396 1101 aa26.1■■□□□ 1.77
GPCPD1-206ENST00000481690 TLE2Q04725 743 aa26.1■■□□□ 1.77
GPCPD1-206ENST00000481690 IMMTQ16891 758 aaKnown RBP26.1■■□□□ 1.77
GPCPD1-206ENST00000481690 LRIT3Q3SXY7 679 aa26.1■■□□□ 1.77
GPCPD1-206ENST00000481690 C1orf53Q5VUE5 145 aa26.1■■□□□ 1.77
GPCPD1-206ENST00000481690 TSEN34Q9BSV6 310 aaKnown RBP26.1■■□□□ 1.77
GPCPD1-206ENST00000481690 SPC25Q9HBM1 224 aa26.1■■□□□ 1.77
GPCPD1-206ENST00000481690 STARD7Q9NQZ5 370 aa26.1■■□□□ 1.77
GPCPD1-206ENST00000481690 PQBP1O60828 265 aaKnown RBP26.09■■□□□ 1.77
GPCPD1-206ENST00000481690 ZNF543Q08ER8 600 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms