RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	SYNGAP1	Q96PV0	1343 aa		5.93	□□□□□ -1.46
HDAC6-223	ENST00000480525	CCDC69	A6NI79	296 aa		5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525		B4DLN1	442 aa		5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525	TMEM232	C9JQI7	657 aa		5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525	KLRF2	D3W0D1	207 aa		5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525	PIK3CD	O00329	1044 aa		5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525	ZBTB5	O15062	677 aa		5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525	DHX16	O60231	1041 aa	Known RBP	5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525	HMGCR	P04035	888 aa		5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525	FCER1A	P12319	257 aa		5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525	RGS2	P41220	211 aa		5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525	MRPL12	P52815	198 aa	Known RBP	5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525	NKX3-2	P78367	333 aa		5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525	SYNE3	Q6ZMZ3	975 aa		5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525	GPR142	Q7Z601	462 aa		5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525	PLEKHH3	Q7Z736	793 aa		5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525	MCF2L2	Q86YR7	1114 aa		5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525	CLEC10A	Q8IUN9	316 aa		5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525	SPICE1	Q8N0Z3	855 aa		5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525	LRRC47	Q8N1G4	583 aa	Known RBP	5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525	FANCB	Q8NB91	859 aa		5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525	DNER	Q8NFT8	737 aa		5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525	NKX2-3	Q8TAU0	364 aa		5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525	ATG4C	Q96DT6	458 aa		5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525	AMN	Q9BXJ7	453 aa		5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525	R3HDML	Q9H3Y0	253 aa		5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525	ACAD9	Q9H845	621 aa		5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525	CPA4	Q9UI42	421 aa		5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525	TAF6L	Q9Y6J9	622 aa		5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525	FRMPD4	Q14CM0	1322 aa		5.92	□□□□□ -1.46
HDAC6-223	ENST00000480525	PDE4DIP	Q5VU43	2346 aa		5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	PNMA6F	A0A0J9YX94	578 aa		5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	ESYT2	A0FGR8	921 aa		5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	ZBTB43	O43298	467 aa		5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	STAM2	O75886	525 aa		5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	IFNAR1	P17181	557 aa		5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	ERCC3	P19447	782 aa		5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	CAST	P20810	708 aa	Known RBP	5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	MCM2	P49736	904 aa		5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	ATP2B2	Q01814	1243 aa		5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	FUT2	Q10981	343 aa		5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	KCTD2	Q14681	263 aa		5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	ZYX	Q15942	572 aa	Known RBP	5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	CCDC96	Q2M329	555 aa		5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525		Q3C1V9	767 aa		5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	ADCK5	Q3MIX3	580 aa		5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	XRRA1	Q6P2D8	792 aa		5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	TMTC3	Q6ZXV5	915 aa		5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	SKAP1	Q86WV1	359 aa		5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	FAM133A	Q8N9E0	248 aa		5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	ANKLE1	Q8NAG6	615 aa		5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	CD99L2	Q8TCZ2	262 aa		5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	ZNF333	Q96JL9	665 aa		5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	JAKMIP1	Q96N16	626 aa	Known RBP	5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	MPHOSPH6	Q99547	160 aa	Known RBP	5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	RNF26	Q9BY78	433 aa	Predicted RBP	5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	SEZ6L	Q9BYH1	1024 aa		5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	PORCN	Q9H237	461 aa		5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	INCENP	Q9NQS7	918 aa		5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	PAK6	Q9NQU5	681 aa	Predicted RBP	5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	SH3GLB2	Q9NR46	395 aa		5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	FBXO28	Q9NVF7	368 aa		5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	TRIM17	Q9Y577	477 aa		5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	STK36	Q9NRP7	1315 aa		5.91	□□□□□ -1.46
HDAC6-223	ENST00000480525	ASB14	A6NK59	587 aa		5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	CYTH3	O43739	400 aa		5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	CDKL5	O76039	1030 aa		5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	FMNL1	O95466	1100 aa	Predicted RBP	5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	PDIA4	P13667	645 aa	Known RBP	5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	EDNRB	P24530	442 aa		5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	CTGF	P29279	349 aa		5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	GRK4	P32298	578 aa		5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	FLT3LG	P49771	235 aa		5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	RGS19	P49795	217 aa		5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	HSD17B4	P51659	736 aa		5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	UBXN2A	P68543	259 aa		5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	DGKZ	Q13574	1117 aa		5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	TOB2	Q14106	344 aa	Predicted RBP	5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	RABEP1	Q15276	862 aa		5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	ZNF792	Q3KQV3	632 aa		5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	SNRNP48	Q6IEG0	339 aa	Known RBP	5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	GALNT17	Q6IS24	598 aa		5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	CPLX2	Q6PUV4	134 aa	Known RBP	5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	KCTD1	Q719H9	257 aa		5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	CCAR1	Q8IX12	1150 aa	Known RBP	5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	ADGRF4	Q8IZF3	695 aa		5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	CCDC12	Q8WUD4	166 aa	Predicted RBP	5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	KIFC2	Q96AC6	838 aa		5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	RRP36	Q96EU6	259 aa	Known RBP	5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	TBC1D32	Q96NH3	1257 aa		5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	IWS1	Q96ST2	819 aa		5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	LLPH	Q9BRT6	129 aa	Known RBP	5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	BACH2	Q9BYV9	841 aa		5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	MCOLN1	Q9GZU1	580 aa		5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	JMJD4	Q9H9V9	463 aa		5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	SH2B1	Q9NRF2	756 aa	Predicted RBP	5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	ADD3	Q9UEY8	706 aa	Known RBP	5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	SEC63	Q9UGP8	760 aa	Known RBP	5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525	MRPL11	Q9Y3B7	192 aa	Known RBP	5.9	□□□□□ -1.46
HDAC6-223	ENST00000480525		Q9Y3F1	56 aa		5.9	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 54 ms