RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 IRX5P78411 483 aaPredicted RBP19.29■□□□□ 0.68
DDX56-210ENST00000479440 CTR9Q6PD62 1173 aa19.29■□□□□ 0.68
DDX56-210ENST00000479440 CPXCR1Q8N123 301 aa19.29■□□□□ 0.68
DDX56-210ENST00000479440 CHST13Q8NET6 341 aa19.29■□□□□ 0.68
DDX56-210ENST00000479440 CXXC1Q9P0U4 656 aaPredicted RBP19.29■□□□□ 0.68
DDX56-210ENST00000479440 NYAP2Q9P242 653 aa19.29■□□□□ 0.68
DDX56-210ENST00000479440 CCER2I3L3R5 266 aa19.28■□□□□ 0.68
DDX56-210ENST00000479440 CABYRO75952 493 aa19.28■□□□□ 0.68
DDX56-210ENST00000479440 NKX3-2P78367 333 aa19.28■□□□□ 0.68
DDX56-210ENST00000479440 UBE3CQ15386 1083 aa19.28■□□□□ 0.68
DDX56-210ENST00000479440 AAK1Q2M2I8 961 aa19.28■□□□□ 0.68
DDX56-210ENST00000479440 PPP2R2DQ66LE6 453 aa19.28■□□□□ 0.68
DDX56-210ENST00000479440 ZSCAN25Q6NSZ9 544 aa19.28■□□□□ 0.68
DDX56-210ENST00000479440 C1QTNF1Q9BXJ1 281 aa19.28■□□□□ 0.68
DDX56-210ENST00000479440 SEZ6LQ9BYH1 1024 aa19.28■□□□□ 0.68
DDX56-210ENST00000479440 BOLA2Q9H3K6 86 aa19.28■□□□□ 0.68
DDX56-210ENST00000479440 F5H6K3 240 aa19.27■□□□□ 0.68
DDX56-210ENST00000479440 OAZ1P54368 228 aa19.27■□□□□ 0.68
DDX56-210ENST00000479440 KLRC3Q07444 240 aa19.27■□□□□ 0.68
DDX56-210ENST00000479440 SLFNL1Q499Z3 407 aa19.27■□□□□ 0.68
DDX56-210ENST00000479440 CCDC144CPQ8IYA2 1237 aa19.27■□□□□ 0.68
DDX56-210ENST00000479440 KIFC2Q96AC6 838 aa19.27■□□□□ 0.68
DDX56-210ENST00000479440 FGD4Q96M96 766 aa19.27■□□□□ 0.68
DDX56-210ENST00000479440 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.27■□□□□ 0.68
DDX56-210ENST00000479440 MKNK2Q9HBH9 465 aa19.27■□□□□ 0.68
DDX56-210ENST00000479440 SLC38A10Q9HBR0 1119 aa19.27■□□□□ 0.68
DDX56-210ENST00000479440 RAVER2Q9HCJ3 691 aaKnown RBP19.27■□□□□ 0.68
DDX56-210ENST00000479440 YBX2Q9Y2T7 364 aaKnown RBP19.27■□□□□ 0.68
DDX56-210ENST00000479440 ZEB2O60315 1214 aa19.26■□□□□ 0.67
DDX56-210ENST00000479440 HMMRO75330 724 aa19.26■□□□□ 0.67
DDX56-210ENST00000479440 NOL8Q76FK4 1167 aaKnown RBP19.26■□□□□ 0.67
DDX56-210ENST00000479440 OTOP2Q7RTS6 562 aa19.26■□□□□ 0.67
DDX56-210ENST00000479440 MICALL1Q8N3F8 863 aa19.26■□□□□ 0.67
DDX56-210ENST00000479440 FEM1BQ9UK73 627 aa19.26■□□□□ 0.67
DDX56-210ENST00000479440 CTAGE5O15320 804 aa19.25■□□□□ 0.67
DDX56-210ENST00000479440 ATP5JP18859 108 aa19.25■□□□□ 0.67
DDX56-210ENST00000479440 BEX3Q00994 111 aa19.25■□□□□ 0.67
DDX56-210ENST00000479440 TNFAIP2Q03169 654 aa19.25■□□□□ 0.67
DDX56-210ENST00000479440 TLK2Q86UE8 772 aa19.25■□□□□ 0.67
DDX56-210ENST00000479440 SLC43A3Q8NBI5 491 aa19.25■□□□□ 0.67
DDX56-210ENST00000479440 HAUS7Q99871 368 aa19.25■□□□□ 0.67
DDX56-210ENST00000479440 KATNBL1Q9H079 304 aa19.25■□□□□ 0.67
DDX56-210ENST00000479440 BCL11AQ9H165 835 aa19.25■□□□□ 0.67
DDX56-210ENST00000479440 SYNPO2Q9UMS6 1093 aa19.25■□□□□ 0.67
DDX56-210ENST00000479440 SLC4A7Q9Y6M7 1214 aa19.25■□□□□ 0.67
DDX56-210ENST00000479440 MYH7P12883 1935 aa19.24■□□□□ 0.67
DDX56-210ENST00000479440 RAB11FIP3O75154 756 aa19.24■□□□□ 0.67
DDX56-210ENST00000479440 RASA1P20936 1047 aa19.24■□□□□ 0.67
DDX56-210ENST00000479440 ITGA7Q13683 1181 aa19.24■□□□□ 0.67
DDX56-210ENST00000479440 SBK1Q52WX2 424 aa19.24■□□□□ 0.67
DDX56-210ENST00000479440 CXCL17Q6UXB2 119 aa19.24■□□□□ 0.67
DDX56-210ENST00000479440 RPUSD2Q8IZ73 545 aaKnown RBP19.24■□□□□ 0.67
DDX56-210ENST00000479440 AP5M1Q9H0R1 490 aa19.24■□□□□ 0.67
DDX56-210ENST00000479440 ACAD9Q9H845 621 aa19.24■□□□□ 0.67
DDX56-210ENST00000479440 PCDHA11Q9Y5I1 949 aa19.24■□□□□ 0.67
DDX56-210ENST00000479440 LRRC37A2A6NM11 1700 aa19.24■□□□□ 0.67
DDX56-210ENST00000479440 GBF1Q92538 1859 aa19.24■□□□□ 0.67
DDX56-210ENST00000479440 UMODL1Q5DID0 1318 aa19.24■□□□□ 0.67
DDX56-210ENST00000479440 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.23■□□□□ 0.67
DDX56-210ENST00000479440 ASB14A6NK59 587 aa19.23■□□□□ 0.67
DDX56-210ENST00000479440 ZBBXA8MT70 800 aa19.23■□□□□ 0.67
DDX56-210ENST00000479440 FDX1P10109 184 aa19.23■□□□□ 0.67
DDX56-210ENST00000479440 CCL23P55773 120 aa19.23■□□□□ 0.67
DDX56-210ENST00000479440 NOC4LQ9BVI4 516 aaKnown RBP19.23■□□□□ 0.67
DDX56-210ENST00000479440 ZNF287Q9HBT7 754 aa19.23■□□□□ 0.67
DDX56-210ENST00000479440 HOMER2Q9NSB8 354 aa19.23■□□□□ 0.67
DDX56-210ENST00000479440 CLIP2Q9UDT6 1046 aa19.23■□□□□ 0.67
DDX56-210ENST00000479440 PFKMP08237 780 aa19.22■□□□□ 0.67
DDX56-210ENST00000479440 RABGGTBP53611 331 aa19.22■□□□□ 0.67
DDX56-210ENST00000479440 SKIV2LQ15477 1246 aaKnown RBP19.22■□□□□ 0.67
DDX56-210ENST00000479440 FSCN1Q16658 493 aaKnown RBP19.22■□□□□ 0.67
DDX56-210ENST00000479440 GIMAP6Q6P9H5 292 aa19.22■□□□□ 0.67
DDX56-210ENST00000479440 RPAP2Q8IXW5 612 aaPredicted RBP19.22■□□□□ 0.67
DDX56-210ENST00000479440 GMCL1P1Q8NEA9 526 aa19.22■□□□□ 0.67
DDX56-210ENST00000479440 PUS7LQ9H0K6 701 aaKnown RBP19.22■□□□□ 0.67
DDX56-210ENST00000479440 GNEQ9Y223 722 aaKnown RBP19.22■□□□□ 0.67
DDX56-210ENST00000479440 ASTN1O14525 1302 aa19.22■□□□□ 0.67
DDX56-210ENST00000479440 IGKV6D-41A0A0C4DH26 115 aa19.21■□□□□ 0.67
DDX56-210ENST00000479440 GTPBP6O43824 516 aaPredicted RBP19.21■□□□□ 0.67
DDX56-210ENST00000479440 B4GALT4O60513 344 aa19.21■□□□□ 0.67
DDX56-210ENST00000479440 CHGBP05060 677 aa19.21■□□□□ 0.67
DDX56-210ENST00000479440 ATP2A2P16615 1042 aaKnown RBP19.21■□□□□ 0.67
DDX56-210ENST00000479440 CNTN2Q02246 1040 aa19.21■□□□□ 0.67
DDX56-210ENST00000479440 STK11IPQ8N1F8 1099 aa19.21■□□□□ 0.67
DDX56-210ENST00000479440 FAM133AQ8N9E0 248 aa19.21■□□□□ 0.67
DDX56-210ENST00000479440 NECAB3Q96P71 396 aaPredicted RBP19.21■□□□□ 0.67
DDX56-210ENST00000479440 WNT8AQ9H1J5 351 aa19.21■□□□□ 0.67
DDX56-210ENST00000479440 COG6Q9Y2V7 657 aa19.21■□□□□ 0.67
DDX56-210ENST00000479440 HCN4Q9Y3Q4 1203 aa19.21■□□□□ 0.67
DDX56-210ENST00000479440 MINDY4BA8MYZ0 360 aa19.2■□□□□ 0.66
DDX56-210ENST00000479440 ERC2O15083 957 aa19.2■□□□□ 0.66
DDX56-210ENST00000479440 TTLL1O95922 423 aa19.2■□□□□ 0.66
DDX56-210ENST00000479440 BMP1P13497 986 aa19.2■□□□□ 0.66
DDX56-210ENST00000479440 STAT2P52630 851 aa19.2■□□□□ 0.66
DDX56-210ENST00000479440 TKFCQ3LXA3 575 aa19.2■□□□□ 0.66
DDX56-210ENST00000479440 LRRC47Q8N1G4 583 aaKnown RBP19.2■□□□□ 0.66
DDX56-210ENST00000479440 A1CFQ9NQ94 594 aaKnown RBP19.2■□□□□ 0.66
DDX56-210ENST00000479440 RNF146Q9NTX7 359 aa19.2■□□□□ 0.66
DDX56-210ENST00000479440 ISY1Q9ULR0 285 aaKnown RBP19.2■□□□□ 0.66
DDX56-210ENST00000479440 MCM3APO60318 1980 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms