RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 ZNF569Q5MCW4 686 aa12.18□□□□□ -0.46
VPS52-217ENST00000478934 JAKMIP3Q5VZ66 844 aa12.18□□□□□ -0.46
VPS52-217ENST00000478934 NUP88Q99567 741 aaPredicted RBP12.18□□□□□ -0.46
VPS52-217ENST00000478934 PARD6BQ9BYG5 372 aa12.18□□□□□ -0.46
VPS52-217ENST00000478934 POLLQ9UGP5 575 aa12.18□□□□□ -0.46
VPS52-217ENST00000478934 RIMBP2O15034 1052 aa12.18□□□□□ -0.46
VPS52-217ENST00000478934 KLRC4O43908 158 aa12.18□□□□□ -0.46
VPS52-217ENST00000478934 UBA7P41226 1012 aa12.18□□□□□ -0.46
VPS52-217ENST00000478934 KLK7P49862 253 aa12.18□□□□□ -0.46
VPS52-217ENST00000478934 ZNF804AQ7Z570 1209 aa12.18□□□□□ -0.46
VPS52-217ENST00000478934 ANKS1AQ92625 1134 aa12.18□□□□□ -0.46
VPS52-217ENST00000478934 SLF1Q9BQI6 1058 aa12.18□□□□□ -0.46
VPS52-217ENST00000478934 NOL10Q9BSC4 688 aaKnown RBP12.18□□□□□ -0.46
VPS52-217ENST00000478934 LIMA1Q9UHB6 759 aaKnown RBP12.18□□□□□ -0.46
VPS52-217ENST00000478934 LEMD3Q9Y2U8 911 aa12.18□□□□□ -0.46
VPS52-217ENST00000478934 LTBP4Q8N2S1 1624 aa12.17□□□□□ -0.46
VPS52-217ENST00000478934 SMCO2A6NFE2 343 aa12.17□□□□□ -0.46
VPS52-217ENST00000478934 PARP1P09874 1014 aaKnown RBP12.17□□□□□ -0.46
VPS52-217ENST00000478934 PLCG1P19174 1290 aa12.17□□□□□ -0.46
VPS52-217ENST00000478934 TECP42680 631 aa12.17□□□□□ -0.46
VPS52-217ENST00000478934 PPP4CP60510 307 aa12.17□□□□□ -0.46
VPS52-217ENST00000478934 MFSD14BQ5SR56 506 aa12.17□□□□□ -0.46
VPS52-217ENST00000478934 ARL6IP4Q66PJ3 421 aaKnown RBP12.17□□□□□ -0.46
VPS52-217ENST00000478934 RPGRQ92834 1020 aaKnown RBP12.17□□□□□ -0.46
VPS52-217ENST00000478934 GJA10Q969M2 543 aa12.17□□□□□ -0.46
VPS52-217ENST00000478934 SRRTQ9BXP5 876 aaKnown RBP12.17□□□□□ -0.46
VPS52-217ENST00000478934 FLT1P17948 1338 aa12.17□□□□□ -0.46
VPS52-217ENST00000478934 FCER1AP12319 257 aa12.17□□□□□ -0.46
VPS52-217ENST00000478934 ERCC3P19447 782 aa12.17□□□□□ -0.46
VPS52-217ENST00000478934 ADSSL1Q8N142 457 aa12.17□□□□□ -0.46
VPS52-217ENST00000478934 COA7Q96BR5 231 aa12.17□□□□□ -0.46
VPS52-217ENST00000478934 CTAGE1Q96RT6 745 aa12.17□□□□□ -0.46
VPS52-217ENST00000478934 ABHD10Q9NUJ1 306 aa12.17□□□□□ -0.46
VPS52-217ENST00000478934 LRRC10BA6NIK2 292 aa12.16□□□□□ -0.46
VPS52-217ENST00000478934 TBC1D8O95759 1140 aa12.16□□□□□ -0.46
VPS52-217ENST00000478934 TUBB4AP04350 444 aa12.16□□□□□ -0.46
VPS52-217ENST00000478934 KRT9P35527 623 aa12.16□□□□□ -0.46
VPS52-217ENST00000478934 RHBDL3P58872 404 aa12.16□□□□□ -0.46
VPS52-217ENST00000478934 CC2D1AQ6P1N0 951 aaPredicted RBP12.16□□□□□ -0.46
VPS52-217ENST00000478934 LRRC47Q8N1G4 583 aaKnown RBP12.16□□□□□ -0.46
VPS52-217ENST00000478934 SLC35F6Q8N357 371 aa12.16□□□□□ -0.46
VPS52-217ENST00000478934 SUGCTQ9HAC7 445 aa12.16□□□□□ -0.46
VPS52-217ENST00000478934 SH3GLB2Q9NR46 395 aa12.16□□□□□ -0.46
VPS52-217ENST00000478934 ARGLU1Q9NWB6 273 aaPredicted RBP12.16□□□□□ -0.46
VPS52-217ENST00000478934 SNED1Q8TER0 1413 aa12.16□□□□□ -0.46
VPS52-217ENST00000478934 LAMB1P07942 1786 aa12.16□□□□□ -0.46
VPS52-217ENST00000478934 BTAF1O14981 1849 aa12.16□□□□□ -0.46
VPS52-217ENST00000478934 TTC26A0AVF1 554 aa12.16□□□□□ -0.46
VPS52-217ENST00000478934 C6orf229H3BNL8 230 aa12.16□□□□□ -0.46
VPS52-217ENST00000478934 TXLNAP40222 546 aa12.16□□□□□ -0.46
VPS52-217ENST00000478934 STK4Q13043 487 aa12.16□□□□□ -0.46
VPS52-217ENST00000478934 RNF216Q9NWF9 866 aaPredicted RBP12.16□□□□□ -0.46
VPS52-217ENST00000478934 UBAP1LF5GYI3 381 aa12.15□□□□□ -0.46
VPS52-217ENST00000478934 GSTO1P78417 241 aa12.15□□□□□ -0.46
VPS52-217ENST00000478934 ST5P78524 1137 aa12.15□□□□□ -0.46
VPS52-217ENST00000478934 POTEDQ86YR6 584 aa12.15□□□□□ -0.46
VPS52-217ENST00000478934 AMOTL1Q8IY63 956 aa12.15□□□□□ -0.46
VPS52-217ENST00000478934 TBCKQ8TEA7 893 aa12.15□□□□□ -0.46
VPS52-217ENST00000478934 TRERF1Q96PN7 1200 aa12.15□□□□□ -0.46
VPS52-217ENST00000478934 GPR75-ASB3A0A0A6YYF3 556 aa12.15□□□□□ -0.46
VPS52-217ENST00000478934 B4DLN1 442 aa12.15□□□□□ -0.46
VPS52-217ENST00000478934 TOM1O60784 492 aa12.15□□□□□ -0.46
VPS52-217ENST00000478934 SERPINB2P05120 415 aa12.15□□□□□ -0.46
VPS52-217ENST00000478934 RHOXF2BP0C7M4 288 aa12.15□□□□□ -0.46
VPS52-217ENST00000478934 GYS1P13807 737 aa12.15□□□□□ -0.46
VPS52-217ENST00000478934 ARHGAP25P42331 645 aa12.15□□□□□ -0.46
VPS52-217ENST00000478934 TXKP42681 527 aa12.15□□□□□ -0.46
VPS52-217ENST00000478934 GTF2IP78347 998 aa12.15□□□□□ -0.46
VPS52-217ENST00000478934 KIF4BQ2VIQ3 1234 aa12.15□□□□□ -0.46
VPS52-217ENST00000478934 CCDC178Q5BJE1 867 aa12.15□□□□□ -0.46
VPS52-217ENST00000478934 CT47A1Q5JQC4 288 aaPredicted RBP12.15□□□□□ -0.46
VPS52-217ENST00000478934 C16orf86Q6ZW13 317 aa12.15□□□□□ -0.46
VPS52-217ENST00000478934 RSRC2Q7L4I2 434 aaKnown RBP12.15□□□□□ -0.46
VPS52-217ENST00000478934 CABP7Q86V35 215 aa12.15□□□□□ -0.46
VPS52-217ENST00000478934 TRIM47Q96LD4 638 aa12.15□□□□□ -0.46
VPS52-217ENST00000478934 RHOXF2Q9BQY4 288 aa12.15□□□□□ -0.46
VPS52-217ENST00000478934 GPCPD1Q9NPB8 672 aa12.15□□□□□ -0.46
VPS52-217ENST00000478934 TCP11L1Q9NUJ3 509 aa12.15□□□□□ -0.46
VPS52-217ENST00000478934 KBTBD4Q9NVX7 518 aa12.15□□□□□ -0.46
VPS52-217ENST00000478934 REXO2Q9Y3B8 237 aaKnown RBP12.15□□□□□ -0.46
VPS52-217ENST00000478934 ROBO3Q96MS0 1386 aa12.15□□□□□ -0.46
VPS52-217ENST00000478934 GOLGA6L9A6NEM1 432 aa12.14□□□□□ -0.47
VPS52-217ENST00000478934 ZBTB22O15209 634 aa12.14□□□□□ -0.47
VPS52-217ENST00000478934 EDIL3O43854 480 aa12.14□□□□□ -0.47
VPS52-217ENST00000478934 GNAQP50148 359 aa12.14□□□□□ -0.47
VPS52-217ENST00000478934 CNGA4Q8IV77 575 aa12.14□□□□□ -0.47
VPS52-217ENST00000478934 NEK11Q8NG66 645 aa12.14□□□□□ -0.47
VPS52-217ENST00000478934 TBC1D16Q8TBP0 767 aa12.14□□□□□ -0.47
VPS52-217ENST00000478934 DUSP9Q99956 384 aaKnown RBP12.14□□□□□ -0.47
VPS52-217ENST00000478934 MMTAG2Q9BU76 263 aaKnown RBP12.14□□□□□ -0.47
VPS52-217ENST00000478934 ZMYND12Q9H0C1 365 aa12.14□□□□□ -0.47
VPS52-217ENST00000478934 GGA1Q9UJY5 639 aa12.14□□□□□ -0.47
VPS52-217ENST00000478934 SBF2Q86WG5 1849 aa12.14□□□□□ -0.47
VPS52-217ENST00000478934 CCDC88AQ3V6T2 1871 aa12.14□□□□□ -0.47
VPS52-217ENST00000478934 ENC1O14682 589 aa12.14□□□□□ -0.47
VPS52-217ENST00000478934 LDHCP07864 332 aa12.14□□□□□ -0.47
VPS52-217ENST00000478934 OAS2P29728 719 aaKnown RBP12.14□□□□□ -0.47
VPS52-217ENST00000478934 CHMP4BP1P59074 171 aa12.14□□□□□ -0.47
VPS52-217ENST00000478934 SHROOM1Q2M3G4 852 aaPredicted RBP12.14□□□□□ -0.47
VPS52-217ENST00000478934 ANKRD40Q6AI12 368 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms