RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 TMC6Q7Z403 805 aa6.55□□□□□ -1.36
CDC42BPA-212ENST00000478573 NAT16Q8N8M0 369 aa6.55□□□□□ -1.36
CDC42BPA-212ENST00000478573 FAM86C1Q9NVL1 165 aa6.55□□□□□ -1.36
CDC42BPA-212ENST00000478573 A0A1W2PQ27 194 aa6.54□□□□□ -1.36
CDC42BPA-212ENST00000478573 A0A1W2PQ64 194 aa6.54□□□□□ -1.36
CDC42BPA-212ENST00000478573 A0A1W2PQC6 194 aa6.54□□□□□ -1.36
CDC42BPA-212ENST00000478573 A0A1W2PQD8 194 aa6.54□□□□□ -1.36
CDC42BPA-212ENST00000478573 C9IYK1 514 aa6.54□□□□□ -1.36
CDC42BPA-212ENST00000478573 HRKO00198 91 aa6.54□□□□□ -1.36
CDC42BPA-212ENST00000478573 ABLIM1O14639 778 aa6.54□□□□□ -1.36
CDC42BPA-212ENST00000478573 N4BP3O15049 544 aa6.54□□□□□ -1.36
CDC42BPA-212ENST00000478573 VAV1P15498 845 aa6.54□□□□□ -1.36
CDC42BPA-212ENST00000478573 AFF3P51826 1226 aaKnown RBP6.54□□□□□ -1.36
CDC42BPA-212ENST00000478573 CDR1P51861 262 aa6.54□□□□□ -1.36
CDC42BPA-212ENST00000478573 ERVFRD-1P60508 538 aa6.54□□□□□ -1.36
CDC42BPA-212ENST00000478573 CYP4F8P98187 520 aa6.54□□□□□ -1.36
CDC42BPA-212ENST00000478573 LDLRAD1Q5T700 205 aa6.54□□□□□ -1.36
CDC42BPA-212ENST00000478573 CWF19L1Q69YN2 538 aaKnown RBP6.54□□□□□ -1.36
CDC42BPA-212ENST00000478573 SLCO6A1Q86UG4 719 aa6.54□□□□□ -1.36
CDC42BPA-212ENST00000478573 C7orf61Q8IZ16 206 aa6.54□□□□□ -1.36
CDC42BPA-212ENST00000478573 DHRS1Q96LJ7 313 aa6.54□□□□□ -1.36
CDC42BPA-212ENST00000478573 C20orf173Q96LM9 149 aa6.54□□□□□ -1.36
CDC42BPA-212ENST00000478573 FERD3LQ96RJ6 166 aa6.54□□□□□ -1.36
CDC42BPA-212ENST00000478573 BACH2Q9BYV9 841 aa6.54□□□□□ -1.36
CDC42BPA-212ENST00000478573 IMPACTQ9P2X3 320 aa6.54□□□□□ -1.36
CDC42BPA-212ENST00000478573 SUCOQ9UBS9 1254 aaKnown RBP6.54□□□□□ -1.36
CDC42BPA-212ENST00000478573 TRIM13O60858 407 aa6.53□□□□□ -1.36
CDC42BPA-212ENST00000478573 GSTM1P09488 218 aa6.53□□□□□ -1.36
CDC42BPA-212ENST00000478573 ACRP10323 421 aa6.53□□□□□ -1.36
CDC42BPA-212ENST00000478573 ZNF76P36508 570 aa6.53□□□□□ -1.36
CDC42BPA-212ENST00000478573 LAPTM5Q13571 262 aa6.53□□□□□ -1.36
CDC42BPA-212ENST00000478573 VMACQ2NL98 169 aa6.53□□□□□ -1.36
CDC42BPA-212ENST00000478573 MZB1Q8WU39 189 aa6.53□□□□□ -1.36
CDC42BPA-212ENST00000478573 RELTQ969Z4 430 aa6.53□□□□□ -1.36
CDC42BPA-212ENST00000478573 JMJD8Q96S16 334 aa6.53□□□□□ -1.36
CDC42BPA-212ENST00000478573 KLHL14Q9P2G3 628 aa6.53□□□□□ -1.36
CDC42BPA-212ENST00000478573 ZNRF3Q9ULT6 936 aa6.53□□□□□ -1.36
CDC42BPA-212ENST00000478573 TP53P04637 393 aaPredicted RBP6.52□□□□□ -1.37
CDC42BPA-212ENST00000478573 GSNP06396 782 aa6.52□□□□□ -1.37
CDC42BPA-212ENST00000478573 YBX1P67809 324 aaKnown RBP6.52□□□□□ -1.37
CDC42BPA-212ENST00000478573 TMEM62Q0P6H9 643 aa6.52□□□□□ -1.37
CDC42BPA-212ENST00000478573 NOL9Q5SY16 702 aaKnown RBP6.52□□□□□ -1.37
CDC42BPA-212ENST00000478573 DCAF15Q66K64 600 aa6.52□□□□□ -1.37
CDC42BPA-212ENST00000478573 USP48Q86UV5 1035 aa6.52□□□□□ -1.37
CDC42BPA-212ENST00000478573 MARCH10Q8NA82 808 aaPredicted RBP6.52□□□□□ -1.37
CDC42BPA-212ENST00000478573 KCNC2Q96PR1 638 aa6.52□□□□□ -1.37
CDC42BPA-212ENST00000478573 PCDHGB7Q9Y5F8 929 aa6.52□□□□□ -1.37
CDC42BPA-212ENST00000478573 A0A0G2JLL6 359 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPA-212ENST00000478573 A0A1W2PQ45 241 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPA-212ENST00000478573 A0A1W2PQY0 241 aa6.51□□□□□ -1.37
CDC42BPA-212ENST00000478573 H0Y8X5 98 aa6.51□□□□□ -1.37
CDC42BPA-212ENST00000478573 SCAMP3O14828 347 aaKnown RBP6.51□□□□□ -1.37
CDC42BPA-212ENST00000478573 NCKAP1LP55160 1127 aa6.51□□□□□ -1.37
CDC42BPA-212ENST00000478573 ZNF394Q53GI3 561 aa6.51□□□□□ -1.37
CDC42BPA-212ENST00000478573 CNKSR3Q6P9H4 555 aa6.51□□□□□ -1.37
CDC42BPA-212ENST00000478573 JAMLQ86YT9 394 aa6.51□□□□□ -1.37
CDC42BPA-212ENST00000478573 BRF1Q92994 677 aa6.51□□□□□ -1.37
CDC42BPA-212ENST00000478573 DACT3Q96B18 629 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPA-212ENST00000478573 PRR13Q9NZ81 148 aa6.51□□□□□ -1.37
CDC42BPA-212ENST00000478573 A0A1W2PQJ5 194 aa6.5□□□□□ -1.37
CDC42BPA-212ENST00000478573 SASH1O94885 1247 aa6.5□□□□□ -1.37
CDC42BPA-212ENST00000478573 IMPDH2P12268 514 aa6.5□□□□□ -1.37
CDC42BPA-212ENST00000478573 PMS1P54277 932 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-212ENST00000478573 RTP2Q5QGT7 225 aa6.5□□□□□ -1.37
CDC42BPA-212ENST00000478573 RPTNQ6XPR3 784 aa6.5□□□□□ -1.37
CDC42BPA-212ENST00000478573 PPFIBP1Q86W92 1011 aa6.5□□□□□ -1.37
CDC42BPA-212ENST00000478573 LDHDQ86WU2 507 aa6.5□□□□□ -1.37
CDC42BPA-212ENST00000478573 SLC12A9Q9BXP2 914 aa6.5□□□□□ -1.37
CDC42BPA-212ENST00000478573 KRTAP4-2Q9BYR5 136 aa6.5□□□□□ -1.37
CDC42BPA-212ENST00000478573 EPB41L4AQ9HCS5 686 aaPredicted RBP6.5□□□□□ -1.37
CDC42BPA-212ENST00000478573 TNFRSF12AQ9NP84 129 aa6.5□□□□□ -1.37
CDC42BPA-212ENST00000478573 ACSL6Q9UKU0 697 aa6.5□□□□□ -1.37
CDC42BPA-212ENST00000478573 IRS4O14654 1257 aaPredicted RBP6.49□□□□□ -1.37
CDC42BPA-212ENST00000478573 SHOXO15266 292 aa6.49□□□□□ -1.37
CDC42BPA-212ENST00000478573 NFIXQ14938 502 aa6.49□□□□□ -1.37
CDC42BPA-212ENST00000478573 HLA-DQA1Q5Y7H0 255 aa6.49□□□□□ -1.37
CDC42BPA-212ENST00000478573 INTS3Q68E01 1043 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-212ENST00000478573 TMEFF1Q8IYR6 380 aa6.49□□□□□ -1.37
CDC42BPA-212ENST00000478573 TMEM52Q8NDY8 209 aa6.49□□□□□ -1.37
CDC42BPA-212ENST00000478573 METTL5Q9NRN9 209 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-212ENST00000478573 PPT2Q9UMR5 302 aa6.49□□□□□ -1.37
CDC42BPA-212ENST00000478573 BUB1BO60566 1050 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-212ENST00000478573 MSL3P1P0C860 447 aa6.48□□□□□ -1.37
CDC42BPA-212ENST00000478573 CEBPAP49715 358 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-212ENST00000478573 ZNF445P59923 1031 aa6.48□□□□□ -1.37
CDC42BPA-212ENST00000478573 ZNF200P98182 395 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-212ENST00000478573 ZYXQ15942 572 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-212ENST00000478573 PLEKHN1Q494U1 663 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-212ENST00000478573 AXDND1Q5T1B0 1012 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-212ENST00000478573 ZC3H14Q6PJT7 736 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-212ENST00000478573 RUFY4Q6ZNE9 571 aa6.48□□□□□ -1.37
CDC42BPA-212ENST00000478573 FAM129CQ86XR2 697 aa6.48□□□□□ -1.37
CDC42BPA-212ENST00000478573 IGDCC3Q8IVU1 814 aa6.48□□□□□ -1.37
CDC42BPA-212ENST00000478573 ZDHHC14Q8IZN3 488 aa6.48□□□□□ -1.37
CDC42BPA-212ENST00000478573 FIBCD1Q8N539 461 aa6.48□□□□□ -1.37
CDC42BPA-212ENST00000478573 FEZF2Q8TBJ5 459 aa6.48□□□□□ -1.37
CDC42BPA-212ENST00000478573 SMARCC1Q92922 1105 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-212ENST00000478573 PWWP2AQ96N64 755 aa6.48□□□□□ -1.37
CDC42BPA-212ENST00000478573 TM9SF2Q99805 663 aa6.48□□□□□ -1.37
CDC42BPA-212ENST00000478573 NOL6Q9H6R4 1146 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms