RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 PRSS53Q2L4Q9 553 aa8.55□□□□□ -1.04
VPS50-212ENST00000476413 THNSL2Q86YJ6 484 aa8.55□□□□□ -1.04
VPS50-212ENST00000476413 DHX37Q8IY37 1157 aaKnown RBP8.55□□□□□ -1.04
VPS50-212ENST00000476413 MKNK2Q9HBH9 465 aa8.55□□□□□ -1.04
VPS50-212ENST00000476413 TRIM39Q9HCM9 518 aa8.55□□□□□ -1.04
VPS50-212ENST00000476413 BLACEA4D250 179 aa8.54□□□□□ -1.04
VPS50-212ENST00000476413 IRS4O14654 1257 aaPredicted RBP8.54□□□□□ -1.04
VPS50-212ENST00000476413 SNRPB2P08579 225 aaKnown RBP8.54□□□□□ -1.04
VPS50-212ENST00000476413 SDSP20132 328 aa8.54□□□□□ -1.04
VPS50-212ENST00000476413 DPY19L1Q2PZI1 675 aa8.54□□□□□ -1.04
VPS50-212ENST00000476413 ZNF655Q8N720 491 aaPredicted RBP8.54□□□□□ -1.04
VPS50-212ENST00000476413 GSTCDQ8NEC7 633 aa8.54□□□□□ -1.04
VPS50-212ENST00000476413 SLC7A14Q8TBB6 771 aa8.54□□□□□ -1.04
VPS50-212ENST00000476413 SHKBP1Q8TBC3 707 aa8.54□□□□□ -1.04
VPS50-212ENST00000476413 KCTD13Q8WZ19 329 aa8.54□□□□□ -1.04
VPS50-212ENST00000476413 COPS5Q92905 334 aa8.54□□□□□ -1.04
VPS50-212ENST00000476413 TCTN2Q96GX1 697 aa8.54□□□□□ -1.04
VPS50-212ENST00000476413 CCDC140Q96MF4 163 aa8.54□□□□□ -1.04
VPS50-212ENST00000476413 IPO9Q96P70 1041 aaKnown RBP8.54□□□□□ -1.04
VPS50-212ENST00000476413 SLC52A2Q9HAB3 445 aa8.54□□□□□ -1.04
VPS50-212ENST00000476413 FAM83GA6ND36 823 aa8.53□□□□□ -1.04
VPS50-212ENST00000476413 WDR64B1ANS9 1081 aa8.53□□□□□ -1.04
VPS50-212ENST00000476413 ARNTLO00327 626 aa8.53□□□□□ -1.04
VPS50-212ENST00000476413 AURKAO14965 403 aa8.53□□□□□ -1.04
VPS50-212ENST00000476413 IGLV1-40P01703 118 aa8.53□□□□□ -1.04
VPS50-212ENST00000476413 H2AFB1P0C5Y9 115 aa8.53□□□□□ -1.04
VPS50-212ENST00000476413 H2AFB2P0C5Z0 115 aa8.53□□□□□ -1.04
VPS50-212ENST00000476413 ITIH2P19823 946 aa8.53□□□□□ -1.04
VPS50-212ENST00000476413 SCRN1Q12765 414 aa8.53□□□□□ -1.04
VPS50-212ENST00000476413 GAB4Q2WGN9 574 aa8.53□□□□□ -1.04
VPS50-212ENST00000476413 TAF7LQ5H9L4 462 aa8.53□□□□□ -1.04
VPS50-212ENST00000476413 DUSP27Q5VZP5 1158 aa8.53□□□□□ -1.04
VPS50-212ENST00000476413 FCRL3Q96P31 734 aaPredicted RBP8.53□□□□□ -1.04
VPS50-212ENST00000476413 SLC12A9Q9BXP2 914 aa8.53□□□□□ -1.04
VPS50-212ENST00000476413 ASCC2Q9H1I8 757 aaPredicted RBP8.53□□□□□ -1.04
VPS50-212ENST00000476413 NOP58Q9Y2X3 529 aaKnown RBP8.53□□□□□ -1.04
VPS50-212ENST00000476413 FAM155AB1AL88 458 aaPredicted RBP8.52□□□□□ -1.05
VPS50-212ENST00000476413 STXBP3O00186 592 aa8.52□□□□□ -1.05
VPS50-212ENST00000476413 DNAJC8O75937 253 aaPredicted RBP8.52□□□□□ -1.05
VPS50-212ENST00000476413 CEACAM5P06731 702 aa8.52□□□□□ -1.05
VPS50-212ENST00000476413 CD3EP07766 207 aa8.52□□□□□ -1.05
VPS50-212ENST00000476413 IFNGR1P15260 489 aa8.52□□□□□ -1.05
VPS50-212ENST00000476413 FSTP19883 344 aa8.52□□□□□ -1.05
VPS50-212ENST00000476413 POU3F3P20264 500 aaPredicted RBP8.52□□□□□ -1.05
VPS50-212ENST00000476413 BMP8BP34820 402 aa8.52□□□□□ -1.05
VPS50-212ENST00000476413 POU4F1Q01851 419 aa8.52□□□□□ -1.05
VPS50-212ENST00000476413 NKAPLQ5M9Q1 402 aa8.52□□□□□ -1.05
VPS50-212ENST00000476413 KRT26Q7Z3Y9 468 aa8.52□□□□□ -1.05
VPS50-212ENST00000476413 TSPYL5Q86VY4 417 aaPredicted RBP8.52□□□□□ -1.05
VPS50-212ENST00000476413 RPUSD2Q8IZ73 545 aaKnown RBP8.52□□□□□ -1.05
VPS50-212ENST00000476413 USHBP1Q8N6Y0 703 aa8.52□□□□□ -1.05
VPS50-212ENST00000476413 NPLOC4Q8TAT6 608 aa8.52□□□□□ -1.05
VPS50-212ENST00000476413 METTL22Q9BUU2 404 aaPredicted RBP8.52□□□□□ -1.05
VPS50-212ENST00000476413 SEMA3GQ9NS98 782 aa8.52□□□□□ -1.05
VPS50-212ENST00000476413 SFMBT1Q9UHJ3 866 aa8.52□□□□□ -1.05
VPS50-212ENST00000476413 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.51□□□□□ -1.05
VPS50-212ENST00000476413 CPP00450 1065 aa8.51□□□□□ -1.05
VPS50-212ENST00000476413 PROCP04070 461 aa8.51□□□□□ -1.05
VPS50-212ENST00000476413 THBDP07204 575 aa8.51□□□□□ -1.05
VPS50-212ENST00000476413 VAV1P15498 845 aa8.51□□□□□ -1.05
VPS50-212ENST00000476413 ECI1P42126 302 aa8.51□□□□□ -1.05
VPS50-212ENST00000476413 KCNJ6P48051 423 aa8.51□□□□□ -1.05
VPS50-212ENST00000476413 DOC2BQ14184 412 aa8.51□□□□□ -1.05
VPS50-212ENST00000476413 CLEC16AQ2KHT3 1053 aa8.51□□□□□ -1.05
VPS50-212ENST00000476413 RTP2Q5QGT7 225 aa8.51□□□□□ -1.05
VPS50-212ENST00000476413 CDKAL1Q5VV42 579 aa8.51□□□□□ -1.05
VPS50-212ENST00000476413 ZCRB1Q8TBF4 217 aaKnown RBP8.51□□□□□ -1.05
VPS50-212ENST00000476413 FRS2Q8WU20 508 aa8.51□□□□□ -1.05
VPS50-212ENST00000476413 SCLYQ96I15 445 aa8.51□□□□□ -1.05
VPS50-212ENST00000476413 HSPA12BQ96MM6 686 aa8.51□□□□□ -1.05
VPS50-212ENST00000476413 FAM126AQ9BYI3 521 aaPredicted RBP8.51□□□□□ -1.05
VPS50-212ENST00000476413 ASXL2Q76L83 1435 aa8.51□□□□□ -1.05
VPS50-212ENST00000476413 hCG_2014768A0A024R1R8 64 aa8.5□□□□□ -1.05
VPS50-212ENST00000476413 GSG1L2A8MUP6 293 aa8.5□□□□□ -1.05
VPS50-212ENST00000476413 ZNF205O95201 554 aa8.5□□□□□ -1.05
VPS50-212ENST00000476413 GDF11O95390 407 aa8.5□□□□□ -1.05
VPS50-212ENST00000476413 MYCLP1P12525 358 aaPredicted RBP8.5□□□□□ -1.05
VPS50-212ENST00000476413 STAT3P40763 770 aa8.5□□□□□ -1.05
VPS50-212ENST00000476413 GABREP78334 506 aa8.5□□□□□ -1.05
VPS50-212ENST00000476413 TESK1Q15569 626 aa8.5□□□□□ -1.05
VPS50-212ENST00000476413 CPSF6Q16630 551 aaKnown RBP eCLIP8.5□□□□□ -1.05
VPS50-212ENST00000476413 RSPO4Q2I0M5 234 aaPredicted RBP8.5□□□□□ -1.05
VPS50-212ENST00000476413 BRAPQ7Z569 592 aa8.5□□□□□ -1.05
VPS50-212ENST00000476413 FGD2Q7Z6J4 655 aa8.5□□□□□ -1.05
VPS50-212ENST00000476413 RNF180Q86T96 592 aa8.5□□□□□ -1.05
VPS50-212ENST00000476413 ZDHHC13Q8IUH4 622 aa8.5□□□□□ -1.05
VPS50-212ENST00000476413 PLD6Q8N2A8 252 aaKnown RBP8.5□□□□□ -1.05
VPS50-212ENST00000476413 PTPRN2Q92932 1015 aa8.5□□□□□ -1.05
VPS50-212ENST00000476413 OSBPL1AQ9BXW6 950 aa8.5□□□□□ -1.05
VPS50-212ENST00000476413 TRIT1Q9H3H1 467 aaKnown RBP8.5□□□□□ -1.05
VPS50-212ENST00000476413 GPRC5CQ9NQ84 441 aa8.5□□□□□ -1.05
VPS50-212ENST00000476413 INTS7Q9NVH2 962 aaKnown RBP8.5□□□□□ -1.05
VPS50-212ENST00000476413 GPATCH2Q9NW75 528 aa8.5□□□□□ -1.05
VPS50-212ENST00000476413 BACE2Q9Y5Z0 518 aa8.5□□□□□ -1.05
VPS50-212ENST00000476413 PRR19A6NJB7 356 aa8.49□□□□□ -1.05
VPS50-212ENST00000476413 H3BS24 57 aa8.49□□□□□ -1.05
VPS50-212ENST00000476413 GSC2O15499 205 aa8.49□□□□□ -1.05
VPS50-212ENST00000476413 TPP2P29144 1249 aaPredicted RBP8.49□□□□□ -1.05
VPS50-212ENST00000476413 CLCN7P51798 805 aa8.49□□□□□ -1.05
VPS50-212ENST00000476413 CWF19L1Q69YN2 538 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms