RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 MAGI2Q86UL8 1455 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 VPS8Q8N3P4 1428 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 FAM177BA6PVY3 158 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 EGFRP00533 1210 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 MYL1P05976 194 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 U2AF1L5P0DN76 240 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 SLC8A3P57103 927 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 U2AF1Q01081 240 aaKnown RBP eCLIP6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 COL9A2Q14055 689 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 KBTBD12Q3ZCT8 623 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 SFMBT2Q5VUG0 894 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 RCSD1Q6JBY9 416 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 PRPF40BQ6NWY9 871 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 KIAA1524Q8TCG1 905 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 JAKMIP2Q96AA8 810 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 SAAL1Q96ER3 474 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 RBM17Q96I25 401 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 YIPF2Q9BWQ6 316 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 BRINP2Q9C0B6 783 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 ABCB6Q9NP58 842 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 BATF3Q9NR55 127 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 KCNQ5Q9NR82 932 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 ARGLU1Q9NWB6 273 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 KLHL42Q9P2K6 505 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 PPM1HQ9ULR3 514 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 RABL2BQ9UNT1 228 aa6.81□□□□□ -1.32
ECHDC1-215ENST00000475319 A0A1W2PNR3 127 aa6.8□□□□□ -1.32
ECHDC1-215ENST00000475319 GREM1O60565 184 aa6.8□□□□□ -1.32
ECHDC1-215ENST00000475319 PEX14O75381 377 aa6.8□□□□□ -1.32
ECHDC1-215ENST00000475319 PF4P02776 101 aa6.8□□□□□ -1.32
ECHDC1-215ENST00000475319 EDN3P14138 238 aa6.8□□□□□ -1.32
ECHDC1-215ENST00000475319 GARTP22102 1010 aa6.8□□□□□ -1.32
ECHDC1-215ENST00000475319 GPTP24298 496 aa6.8□□□□□ -1.32
ECHDC1-215ENST00000475319 G3BP1Q13283 466 aaKnown RBP eCLIP6.8□□□□□ -1.321e-11■■■□□ 15.6
ECHDC1-215ENST00000475319 POSTNQ15063 836 aa6.8□□□□□ -1.32
ECHDC1-215ENST00000475319 E2F5Q15329 346 aa6.8□□□□□ -1.32
ECHDC1-215ENST00000475319 PREPLQ4J6C6 727 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-215ENST00000475319 PCNX4Q63HM2 1172 aa6.8□□□□□ -1.32
ECHDC1-215ENST00000475319 TPTE2Q6XPS3 522 aa6.8□□□□□ -1.32
ECHDC1-215ENST00000475319 DTHD1Q6ZMT9 781 aa6.8□□□□□ -1.32
ECHDC1-215ENST00000475319 SEPT14Q6ZU15 432 aa6.8□□□□□ -1.32
ECHDC1-215ENST00000475319 SV2BQ7L1I2 683 aa6.8□□□□□ -1.32
ECHDC1-215ENST00000475319 PRICKLE2Q7Z3G6 844 aa6.8□□□□□ -1.32
ECHDC1-215ENST00000475319 MFN1Q8IWA4 741 aa6.8□□□□□ -1.32
ECHDC1-215ENST00000475319 C3orf20Q8ND61 904 aa6.8□□□□□ -1.32
ECHDC1-215ENST00000475319 FAM76AQ8TAV0 307 aa6.8□□□□□ -1.32
ECHDC1-215ENST00000475319 FAM81AQ8TBF8 368 aa6.8□□□□□ -1.32
ECHDC1-215ENST00000475319 BICD2Q8TD16 824 aa6.8□□□□□ -1.32
ECHDC1-215ENST00000475319 EZH1Q92800 747 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-215ENST00000475319 RGL1Q9NZL6 768 aa6.8□□□□□ -1.32
ECHDC1-215ENST00000475319 PRKAG3Q9UGI9 489 aa6.8□□□□□ -1.32
ECHDC1-215ENST00000475319 ITGB1BP2Q9UKP3 347 aa6.8□□□□□ -1.32
ECHDC1-215ENST00000475319 WDR37Q9Y2I8 494 aa6.8□□□□□ -1.32
ECHDC1-215ENST00000475319 CTDP1Q9Y5B0 961 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-215ENST00000475319 SAMD9Q5K651 1589 aa6.8□□□□□ -1.32
ECHDC1-215ENST00000475319 FHOD3Q2V2M9 1422 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 FMN1Q68DA7 1419 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 BRD4O60885 1362 aaPredicted RBP6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 TMEM238LA0A1B0GVL6 79 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 CHUKO15111 745 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 AHCYL1O43865 530 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 CELA3AP09093 270 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 CCDC159P0C7I6 412 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 MSX1P28360 303 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 CRKP46108 304 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 LIG3P49916 1009 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 CHMP4BP1P59074 171 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 APOBRQ0VD83 1088 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 PKN1Q16512 942 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 KIAA0753Q2KHM9 967 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 SLC4A8Q2Y0W8 1093 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 RRP12Q5JTH9 1297 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 CCDC81Q6ZN84 652 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 C1orf229Q6ZS94 237 aaPredicted RBP6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 PRPF38AQ8NAV1 312 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 GOLM1Q8NBJ4 401 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 ANKRD24Q8TF21 1146 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 RSPH1Q8WYR4 309 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 TBC1D5Q92609 795 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 SMARCE1Q969G3 411 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 DHRS1Q96LJ7 313 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 SCLT1Q96NL6 688 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 MPHOSPH6Q99547 160 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 MAK16Q9BXY0 300 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 KRTAP4-5Q9BYR2 181 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 UBXN6Q9BZV1 441 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 NACA2Q9H009 215 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 RSPH9Q9H1X1 276 aaPredicted RBP6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 MMADHCQ9H3L0 296 aaPredicted RBP6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 KANSL2Q9H9L4 492 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 LIN7BQ9HAP6 207 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 PCDH12Q9NPG4 1184 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 TPSG1Q9NRR2 321 aa6.79□□□□□ -1.32
ECHDC1-215ENST00000475319 ADAMTSL3P82987 1691 aa6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 PCF11O94913 1555 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 SLC27A2O14975 620 aa6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 ERC2O15083 957 aa6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 SMAD7O15105 426 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 ERLIN2O94905 339 aa6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 PYGLP06737 847 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms