RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 CCDC144CPQ8IYA2 1237 aa11.56□□□□□ -0.56
MCF2L-223ENST00000473345 LRRC47Q8N1G4 583 aaKnown RBP11.56□□□□□ -0.56
MCF2L-223ENST00000473345 SLC43A3Q8NBI5 491 aa11.56□□□□□ -0.56
MCF2L-223ENST00000473345 WNT8AQ9H1J5 351 aa11.56□□□□□ -0.56
MCF2L-223ENST00000473345 SH2D4AQ9H788 454 aa11.56□□□□□ -0.56
MCF2L-223ENST00000473345 SLC38A10Q9HBR0 1119 aa11.56□□□□□ -0.56
MCF2L-223ENST00000473345 GOPCQ9HD26 462 aa11.56□□□□□ -0.56
MCF2L-223ENST00000473345 NYAP2Q9P242 653 aa11.56□□□□□ -0.56
MCF2L-223ENST00000473345 CNPY2Q9Y2B0 182 aa11.56□□□□□ -0.56
MCF2L-223ENST00000473345 MCM3APO60318 1980 aa11.56□□□□□ -0.56
MCF2L-223ENST00000473345 REV3LO60673 3130 aa11.55□□□□□ -0.56
MCF2L-223ENST00000473345 CHD7Q9P2D1 2997 aa11.55□□□□□ -0.56
MCF2L-223ENST00000473345 MOXD2PA6NHM9 499 aa11.55□□□□□ -0.56
MCF2L-223ENST00000473345 M0R2C6 588 aa11.55□□□□□ -0.56
MCF2L-223ENST00000473345 ARVCFO00192 962 aa11.55□□□□□ -0.56
MCF2L-223ENST00000473345 TNFRSF10AO00220 468 aa11.55□□□□□ -0.56
MCF2L-223ENST00000473345 ARHGEF15O94989 841 aa11.55□□□□□ -0.56
MCF2L-223ENST00000473345 RABGGTBP53611 331 aa11.55□□□□□ -0.56
MCF2L-223ENST00000473345 SNAP25P60880 206 aa11.55□□□□□ -0.56
MCF2L-223ENST00000473345 NKX3-2P78367 333 aa11.55□□□□□ -0.56
MCF2L-223ENST00000473345 SBK1Q52WX2 424 aa11.55□□□□□ -0.56
MCF2L-223ENST00000473345 FAM133AQ8N9E0 248 aa11.55□□□□□ -0.56
MCF2L-223ENST00000473345 PPP1R13LQ8WUF5 828 aa11.55□□□□□ -0.56
MCF2L-223ENST00000473345 KIFC2Q96AC6 838 aa11.55□□□□□ -0.56
MCF2L-223ENST00000473345 CEP95Q96GE4 821 aa11.55□□□□□ -0.56
MCF2L-223ENST00000473345 NKX2-4Q9H2Z4 354 aa11.55□□□□□ -0.56
MCF2L-223ENST00000473345 PDGFCQ9NRA1 345 aa11.55□□□□□ -0.56
MCF2L-223ENST00000473345 CLIP2Q9UDT6 1046 aa11.55□□□□□ -0.56
MCF2L-223ENST00000473345 GNEQ9Y223 722 aaKnown RBP11.55□□□□□ -0.56
MCF2L-223ENST00000473345 ELP1O95163 1332 aa11.55□□□□□ -0.56
MCF2L-223ENST00000473345 FOXP2O15409 715 aa11.54□□□□□ -0.56
MCF2L-223ENST00000473345 PSMC6P62333 389 aa11.54□□□□□ -0.56
MCF2L-223ENST00000473345 HSP90AB4PQ58FF6 505 aa11.54□□□□□ -0.56
MCF2L-223ENST00000473345 CXCL17Q6UXB2 119 aa11.54□□□□□ -0.56
MCF2L-223ENST00000473345 ZNF467Q7Z7K2 595 aaPredicted RBP11.54□□□□□ -0.56
MCF2L-223ENST00000473345 RPAP2Q8IXW5 612 aaPredicted RBP11.54□□□□□ -0.56
MCF2L-223ENST00000473345 MSL3Q8N5Y2 521 aaKnown RBP11.54□□□□□ -0.56
MCF2L-223ENST00000473345 PRPF38AQ8NAV1 312 aaKnown RBP11.54□□□□□ -0.56
MCF2L-223ENST00000473345 NUP133Q8WUM0 1156 aa11.54□□□□□ -0.56
MCF2L-223ENST00000473345 HERVK_113Q902F9 699 aa11.54□□□□□ -0.56
MCF2L-223ENST00000473345 DDX11Q96FC9 970 aa11.54□□□□□ -0.56
MCF2L-223ENST00000473345 AGBL1Q96MI9 1066 aa11.54□□□□□ -0.56
MCF2L-223ENST00000473345 SEC62Q99442 399 aaKnown RBP11.54□□□□□ -0.56
MCF2L-223ENST00000473345 TRPV6Q9H1D0 765 aa11.54□□□□□ -0.56
MCF2L-223ENST00000473345 INCENPQ9NQS7 918 aa11.54□□□□□ -0.56
MCF2L-223ENST00000473345 HOMER2Q9NSB8 354 aa11.54□□□□□ -0.56
MCF2L-223ENST00000473345 LCTP09848 1927 aa11.54□□□□□ -0.56
MCF2L-223ENST00000473345 GBF1Q92538 1859 aa11.53□□□□□ -0.56
MCF2L-223ENST00000473345 MYH7P12883 1935 aa11.53□□□□□ -0.56
MCF2L-223ENST00000473345 A0A0U1RQG5 324 aaPredicted RBP11.53□□□□□ -0.56
MCF2L-223ENST00000473345 EPOPA6NHQ4 379 aa11.53□□□□□ -0.56
MCF2L-223ENST00000473345 MINDY4BA8MYZ0 360 aa11.53□□□□□ -0.56
MCF2L-223ENST00000473345 SMPD1P17405 629 aa11.53□□□□□ -0.56
MCF2L-223ENST00000473345 CCL23P55773 120 aa11.53□□□□□ -0.56
MCF2L-223ENST00000473345 TFF2Q03403 129 aa11.53□□□□□ -0.56
MCF2L-223ENST00000473345 PPIGQ13427 754 aaKnown RBP eCLIP11.53□□□□□ -0.562e-8■■■■□ 19.5
MCF2L-223ENST00000473345 MUM1L1Q5H9M0 696 aa11.53□□□□□ -0.56
MCF2L-223ENST00000473345 GNASQ5JWF2 1037 aa11.53□□□□□ -0.56
MCF2L-223ENST00000473345 SPRED2Q7Z698 418 aa11.53□□□□□ -0.56
MCF2L-223ENST00000473345 ADAMTS19Q8TE59 1207 aa11.53□□□□□ -0.56
MCF2L-223ENST00000473345 MKL1Q969V6 931 aa11.53□□□□□ -0.56
MCF2L-223ENST00000473345 GLT1D1Q96MS3 346 aa11.53□□□□□ -0.56
MCF2L-223ENST00000473345 ASB2Q96Q27 587 aa11.53□□□□□ -0.56
MCF2L-223ENST00000473345 A1CFQ9NQ94 594 aaKnown RBP11.53□□□□□ -0.56
MCF2L-223ENST00000473345 MTMR4Q9NYA4 1195 aa11.53□□□□□ -0.56
MCF2L-223ENST00000473345 ARPP21Q9UBL0 812 aaPredicted RBP11.53□□□□□ -0.56
MCF2L-223ENST00000473345 RFXAPO00287 272 aa11.52□□□□□ -0.57
MCF2L-223ENST00000473345 B4GALT4O60513 344 aa11.52□□□□□ -0.57
MCF2L-223ENST00000473345 RAB11FIP3O75154 756 aa11.52□□□□□ -0.57
MCF2L-223ENST00000473345 COPB2P35606 906 aa11.52□□□□□ -0.57
MCF2L-223ENST00000473345 AKNAD1Q5T1N1 836 aa11.52□□□□□ -0.57
MCF2L-223ENST00000473345 KRT40Q6A162 431 aa11.52□□□□□ -0.57
MCF2L-223ENST00000473345 TAPT1Q6NXT6 567 aa11.52□□□□□ -0.57
MCF2L-223ENST00000473345 CCDC129Q6ZRS4 1044 aa11.52□□□□□ -0.57
MCF2L-223ENST00000473345 OTOP2Q7RTS6 562 aa11.52□□□□□ -0.57
MCF2L-223ENST00000473345 SYMPKQ92797 1274 aaKnown RBP11.52□□□□□ -0.57
MCF2L-223ENST00000473345 NOC4LQ9BVI4 516 aaKnown RBP11.52□□□□□ -0.57
MCF2L-223ENST00000473345 ABHD16BQ9H3Z7 469 aa11.52□□□□□ -0.57
MCF2L-223ENST00000473345 IL23AQ9NPF7 189 aa11.52□□□□□ -0.57
MCF2L-223ENST00000473345 GPAA1O43292 621 aa11.51□□□□□ -0.57
MCF2L-223ENST00000473345 EEPD1Q7L9B9 569 aa11.51□□□□□ -0.57
MCF2L-223ENST00000473345 FBXO16Q8IX29 292 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-223ENST00000473345 ANKRD35Q8N283 1001 aa11.51□□□□□ -0.57
MCF2L-223ENST00000473345 KBTBD3Q8NAB2 608 aa11.51□□□□□ -0.57
MCF2L-223ENST00000473345 OTUD7AQ8TE49 926 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-223ENST00000473345 VTI1AQ96AJ9 217 aa11.51□□□□□ -0.57
MCF2L-223ENST00000473345 SCLYQ96I15 445 aa11.51□□□□□ -0.57
MCF2L-223ENST00000473345 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.51□□□□□ -0.57
MCF2L-223ENST00000473345 HIPK3Q9H422 1215 aa11.51□□□□□ -0.57
MCF2L-223ENST00000473345 THEGQ9P2T0 379 aa11.51□□□□□ -0.57
MCF2L-223ENST00000473345 TMEM232C9JQI7 657 aa11.5□□□□□ -0.57
MCF2L-223ENST00000473345 NMT2O60551 498 aa11.5□□□□□ -0.57
MCF2L-223ENST00000473345 ZBED4O75132 1171 aa11.5□□□□□ -0.57
MCF2L-223ENST00000473345 BMP1P13497 986 aa11.5□□□□□ -0.57
MCF2L-223ENST00000473345 IGFBP4P22692 258 aa11.5□□□□□ -0.57
MCF2L-223ENST00000473345 KCNQ1P51787 676 aa11.5□□□□□ -0.57
MCF2L-223ENST00000473345 TNFAIP2Q03169 654 aa11.5□□□□□ -0.57
MCF2L-223ENST00000473345 ITGA7Q13683 1181 aa11.5□□□□□ -0.57
MCF2L-223ENST00000473345 TTLL4Q14679 1199 aa11.5□□□□□ -0.57
MCF2L-223ENST00000473345 SLFN13Q68D06 897 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms