RNA–Protein interactions for RNA: ENST00000472476.5

TARDBP-204, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-204ENST00000472476 SLC4A3P48751 1232 aa17.16■□□□□ 0.34
TARDBP-204ENST00000472476 CNTN2Q02246 1040 aa17.16■□□□□ 0.34
TARDBP-204ENST00000472476 C20orf194Q5TEA3 1177 aa17.16■□□□□ 0.34
TARDBP-204ENST00000472476 ARMCX2Q7L311 632 aa17.16■□□□□ 0.34
TARDBP-204ENST00000472476 FAM126BQ8IXS8 530 aa17.16■□□□□ 0.34
TARDBP-204ENST00000472476 KBTBD3Q8NAB2 608 aa17.16■□□□□ 0.34
TARDBP-204ENST00000472476 KIFC2Q96AC6 838 aa17.16■□□□□ 0.34
TARDBP-204ENST00000472476 CEP95Q96GE4 821 aa17.16■□□□□ 0.34
TARDBP-204ENST00000472476 PBX4Q9BYU1 374 aa17.16■□□□□ 0.34
TARDBP-204ENST00000472476 LRRCC1Q9C099 1032 aa17.16■□□□□ 0.34
TARDBP-204ENST00000472476 ABHD16BQ9H3Z7 469 aa17.16■□□□□ 0.34
TARDBP-204ENST00000472476 MKNK2Q9HBH9 465 aa17.16■□□□□ 0.34
TARDBP-204ENST00000472476 BDP1A6H8Y1 2624 aa17.16■□□□□ 0.34
TARDBP-204ENST00000472476 LCTP09848 1927 aa17.15■□□□□ 0.34
TARDBP-204ENST00000472476 TRANK1O15050 2925 aa17.15■□□□□ 0.34
TARDBP-204ENST00000472476 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.15■□□□□ 0.34
TARDBP-204ENST00000472476 M0R2C6 588 aa17.15■□□□□ 0.34
TARDBP-204ENST00000472476 ZBED4O75132 1171 aa17.15■□□□□ 0.34
TARDBP-204ENST00000472476 CD4P01730 458 aa17.15■□□□□ 0.34
TARDBP-204ENST00000472476 PTGS1P23219 599 aa17.15■□□□□ 0.34
TARDBP-204ENST00000472476 CCDC144CPQ8IYA2 1237 aa17.15■□□□□ 0.34
TARDBP-204ENST00000472476 SLC43A3Q8NBI5 491 aa17.15■□□□□ 0.34
TARDBP-204ENST00000472476 TIFAQ96CG3 184 aa17.15■□□□□ 0.34
TARDBP-204ENST00000472476 GLT1D1Q96MS3 346 aa17.15■□□□□ 0.34
TARDBP-204ENST00000472476 ECHDC1Q9NTX5 307 aa17.15■□□□□ 0.34
TARDBP-204ENST00000472476 DDX49Q9Y6V7 483 aaKnown RBP17.15■□□□□ 0.34
TARDBP-204ENST00000472476 ZNF536O15090 1300 aa17.15■□□□□ 0.34
TARDBP-204ENST00000472476 LRRC37A2A6NM11 1700 aa17.14■□□□□ 0.33
TARDBP-204ENST00000472476 SOWAHBA6NEL2 793 aa17.14■□□□□ 0.33
TARDBP-204ENST00000472476 RNF113AO15541 343 aaKnown RBP17.14■□□□□ 0.33
TARDBP-204ENST00000472476 ACRP10323 421 aa17.14■□□□□ 0.33
TARDBP-204ENST00000472476 GNASQ5JWF2 1037 aa17.14■□□□□ 0.33
TARDBP-204ENST00000472476 TSHZ3Q63HK5 1081 aa17.14■□□□□ 0.33
TARDBP-204ENST00000472476 ZNF365Q70YC5 407 aa17.14■□□□□ 0.33
TARDBP-204ENST00000472476 LRRC47Q8N1G4 583 aaKnown RBP17.14■□□□□ 0.33
TARDBP-204ENST00000472476 ANKRD35Q8N283 1001 aa17.14■□□□□ 0.33
TARDBP-204ENST00000472476 FAM133AQ8N9E0 248 aa17.14■□□□□ 0.33
TARDBP-204ENST00000472476 PCSK9Q8NBP7 692 aaKnown RBP17.14■□□□□ 0.33
TARDBP-204ENST00000472476 GMCL1P1Q8NEA9 526 aa17.14■□□□□ 0.33
TARDBP-204ENST00000472476 CHST13Q8NET6 341 aa17.14■□□□□ 0.33
TARDBP-204ENST00000472476 APPBP2Q92624 585 aa17.14■□□□□ 0.33
TARDBP-204ENST00000472476 VWCEQ96DN2 955 aa17.14■□□□□ 0.33
TARDBP-204ENST00000472476 FEM1BQ9UK73 627 aa17.14■□□□□ 0.33
TARDBP-204ENST00000472476 GNEQ9Y223 722 aaKnown RBP17.14■□□□□ 0.33
TARDBP-204ENST00000472476 GRIN2DO15399 1336 aa17.14■□□□□ 0.33
TARDBP-204ENST00000472476 A0A0U1RQG5 324 aaPredicted RBP17.13■□□□□ 0.33
TARDBP-204ENST00000472476 GPAA1O43292 621 aa17.13■□□□□ 0.33
TARDBP-204ENST00000472476 OAZ1P54368 228 aa17.13■□□□□ 0.33
TARDBP-204ENST00000472476 BEX3Q00994 111 aa17.13■□□□□ 0.33
TARDBP-204ENST00000472476 PPIGQ13427 754 aaKnown RBP eCLIP17.13■□□□□ 0.336e-7■□□□□ 8.8
TARDBP-204ENST00000472476 ADGRE1Q14246 886 aa17.13■□□□□ 0.33
TARDBP-204ENST00000472476 TMEM63BQ5T3F8 832 aa17.13■□□□□ 0.33
TARDBP-204ENST00000472476 PPP1R12CQ9BZL4 782 aa17.13■□□□□ 0.33
TARDBP-204ENST00000472476 CXXC1Q9P0U4 656 aaPredicted RBP17.13■□□□□ 0.33
TARDBP-204ENST00000472476 FBXO40Q9UH90 709 aa17.13■□□□□ 0.33
TARDBP-204ENST00000472476 MROH7Q68CQ1 1323 aa17.13■□□□□ 0.33
TARDBP-204ENST00000472476 CYP2C18P33260 490 aa17.12■□□□□ 0.33
TARDBP-204ENST00000472476 IFNL3Q8IZI9 196 aa17.12■□□□□ 0.33
TARDBP-204ENST00000472476 ZNF444Q8N0Y2 327 aaPredicted RBP17.12■□□□□ 0.33
TARDBP-204ENST00000472476 NEDD1Q8NHV4 660 aa17.12■□□□□ 0.33
TARDBP-204ENST00000472476 AGBL1Q96MI9 1066 aa17.12■□□□□ 0.33
TARDBP-204ENST00000472476 SEC62Q99442 399 aaKnown RBP17.12■□□□□ 0.33
TARDBP-204ENST00000472476 PRDM12Q9H4Q4 367 aa17.12■□□□□ 0.33
TARDBP-204ENST00000472476 SYNPO2Q9UMS6 1093 aa17.12■□□□□ 0.33
TARDBP-204ENST00000472476 UMODL1Q5DID0 1318 aa17.12■□□□□ 0.33
TARDBP-204ENST00000472476 PLIN4Q96Q06 1357 aa17.12■□□□□ 0.33
TARDBP-204ENST00000472476 PATL2C9JE40 543 aaKnown RBP17.11■□□□□ 0.33
TARDBP-204ENST00000472476 TTLL1O95922 423 aa17.11■□□□□ 0.33
TARDBP-204ENST00000472476 BMP3P12645 472 aa17.11■□□□□ 0.33
TARDBP-204ENST00000472476 TJAP1Q5JTD0 557 aa17.11■□□□□ 0.33
TARDBP-204ENST00000472476 SLFN13Q68D06 897 aa17.11■□□□□ 0.33
TARDBP-204ENST00000472476 HERVK_113Q902F9 699 aa17.11■□□□□ 0.33
TARDBP-204ENST00000472476 SYMPKQ92797 1274 aaKnown RBP17.11■□□□□ 0.33
TARDBP-204ENST00000472476 VTI1AQ96AJ9 217 aa17.11■□□□□ 0.33
TARDBP-204ENST00000472476 DCTPP1Q9H773 170 aa17.11■□□□□ 0.33
TARDBP-204ENST00000472476 A1CFQ9NQ94 594 aaKnown RBP17.11■□□□□ 0.33
TARDBP-204ENST00000472476 HOMER2Q9NSB8 354 aa17.11■□□□□ 0.33
TARDBP-204ENST00000472476 XIRP2A4UGR9 3374 aa17.11■□□□□ 0.33
TARDBP-204ENST00000472476 TMEM232C9JQI7 657 aa17.1■□□□□ 0.33
TARDBP-204ENST00000472476 FOXP2O15409 715 aa17.1■□□□□ 0.33
TARDBP-204ENST00000472476 TNFAIP2Q03169 654 aa17.1■□□□□ 0.33
TARDBP-204ENST00000472476 TAPT1Q6NXT6 567 aa17.1■□□□□ 0.33
TARDBP-204ENST00000472476 CXCL17Q6UXB2 119 aa17.1■□□□□ 0.33
TARDBP-204ENST00000472476 TMEM199Q8N511 208 aa17.1■□□□□ 0.33
TARDBP-204ENST00000472476 IL23AQ9NPF7 189 aa17.1■□□□□ 0.33
TARDBP-204ENST00000472476 PDGFCQ9NRA1 345 aa17.1■□□□□ 0.33
TARDBP-204ENST00000472476 SMPD1P17405 629 aa17.09■□□□□ 0.33
TARDBP-204ENST00000472476 AKNAD1Q5T1N1 836 aa17.09■□□□□ 0.33
TARDBP-204ENST00000472476 RASGRP2Q7LDG7 609 aa17.09■□□□□ 0.33
TARDBP-204ENST00000472476 PURBQ96QR8 312 aaKnown RBP17.09■□□□□ 0.33
TARDBP-204ENST00000472476 SPC25Q9HBM1 224 aa17.09■□□□□ 0.33
TARDBP-204ENST00000472476 INCENPQ9NQS7 918 aa17.09■□□□□ 0.33
TARDBP-204ENST00000472476 YBX2Q9Y2T7 364 aaKnown RBP17.09■□□□□ 0.33
TARDBP-204ENST00000472476 FDX1P10109 184 aa17.08■□□□□ 0.32
TARDBP-204ENST00000472476 GNAT2P19087 354 aa17.08■□□□□ 0.32
TARDBP-204ENST00000472476 TDO2P48775 406 aa17.08■□□□□ 0.32
TARDBP-204ENST00000472476 SNAP25P60880 206 aa17.08■□□□□ 0.32
TARDBP-204ENST00000472476 TFAP4Q01664 338 aa17.08■□□□□ 0.32
TARDBP-204ENST00000472476 MUM1L1Q5H9M0 696 aa17.08■□□□□ 0.32
TARDBP-204ENST00000472476 STAG1Q8WVM7 1258 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms