RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 DCAF4Q8WV16 495 aa10.65□□□□□ -0.7
USF1-204ENST00000472217 AGBL1Q96MI9 1066 aa10.65□□□□□ -0.7
USF1-204ENST00000472217 TMEM47Q9BQJ4 181 aa10.65□□□□□ -0.7
USF1-204ENST00000472217 TCP11L1Q9NUJ3 509 aa10.65□□□□□ -0.7
USF1-204ENST00000472217 CNPY2Q9Y2B0 182 aa10.65□□□□□ -0.7
USF1-204ENST00000472217 SYNGAP1Q96PV0 1343 aa10.64□□□□□ -0.71
USF1-204ENST00000472217 A0A1W2PPC1 479 aa10.64□□□□□ -0.71
USF1-204ENST00000472217 HIP1O00291 1037 aa10.64□□□□□ -0.71
USF1-204ENST00000472217 SNAI1O95863 264 aaPredicted RBP10.64□□□□□ -0.71
USF1-204ENST00000472217 RARBP10826 455 aa10.64□□□□□ -0.71
USF1-204ENST00000472217 PCP11498 1178 aaKnown RBP10.64□□□□□ -0.71
USF1-204ENST00000472217 MAGEA10P43363 369 aaPredicted RBP10.64□□□□□ -0.71
USF1-204ENST00000472217 SNAP25P60880 206 aa10.64□□□□□ -0.71
USF1-204ENST00000472217 LRRC41Q15345 812 aa10.64□□□□□ -0.71
USF1-204ENST00000472217 CCDC174Q6PII3 467 aa10.64□□□□□ -0.71
USF1-204ENST00000472217 ZNF467Q7Z7K2 595 aaPredicted RBP10.64□□□□□ -0.71
USF1-204ENST00000472217 LENG1Q96BZ8 264 aaPredicted RBP10.64□□□□□ -0.71
USF1-204ENST00000472217 FGD4Q96M96 766 aa10.64□□□□□ -0.71
USF1-204ENST00000472217 IL25Q9H293 177 aa10.64□□□□□ -0.71
USF1-204ENST00000472217 RNF41Q9H4P4 317 aaPredicted RBP10.64□□□□□ -0.71
USF1-204ENST00000472217 ACAD9Q9H845 621 aa10.64□□□□□ -0.71
USF1-204ENST00000472217 XPNPEP3Q9NQH7 507 aa10.64□□□□□ -0.71
USF1-204ENST00000472217 RNF146Q9NTX7 359 aa10.64□□□□□ -0.71
USF1-204ENST00000472217 PRR12Q9ULL5 1215 aa10.64□□□□□ -0.71
USF1-204ENST00000472217 LRRC37A2A6NM11 1700 aa10.64□□□□□ -0.71
USF1-204ENST00000472217 ZNF213O14771 459 aa10.63□□□□□ -0.71
USF1-204ENST00000472217 PGK1P00558 417 aa10.63□□□□□ -0.71
USF1-204ENST00000472217 ALAS1P13196 640 aa10.63□□□□□ -0.71
USF1-204ENST00000472217 AKR1A1P14550 325 aa10.63□□□□□ -0.71
USF1-204ENST00000472217 GSPT1P15170 499 aaKnown RBP10.63□□□□□ -0.71
USF1-204ENST00000472217 BMP8BP34820 402 aa10.63□□□□□ -0.71
USF1-204ENST00000472217 SLC16A2P36021 539 aa10.63□□□□□ -0.71
USF1-204ENST00000472217 ADCYAP1R1P41586 468 aa10.63□□□□□ -0.71
USF1-204ENST00000472217 RTP1P59025 263 aa10.63□□□□□ -0.71
USF1-204ENST00000472217 CNTN2Q02246 1040 aa10.63□□□□□ -0.71
USF1-204ENST00000472217 TKFCQ3LXA3 575 aa10.63□□□□□ -0.71
USF1-204ENST00000472217 TTC22Q5TAA0 569 aa10.63□□□□□ -0.71
USF1-204ENST00000472217 TTBK2Q6IQ55 1244 aa10.63□□□□□ -0.71
USF1-204ENST00000472217 ESR2Q92731 530 aa10.63□□□□□ -0.71
USF1-204ENST00000472217 FERMT2Q96AC1 680 aa10.63□□□□□ -0.71
USF1-204ENST00000472217 TRERF1Q96PN7 1200 aa10.63□□□□□ -0.71
USF1-204ENST00000472217 DSCC1Q9BVC3 393 aa10.63□□□□□ -0.71
USF1-204ENST00000472217 A1CFQ9NQ94 594 aaKnown RBP10.63□□□□□ -0.71
USF1-204ENST00000472217 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.63□□□□□ -0.71
USF1-204ENST00000472217 ZHX1Q9UKY1 873 aaPredicted RBP10.63□□□□□ -0.71
USF1-204ENST00000472217 FRMPD2Q68DX3 1309 aaPredicted RBP10.62□□□□□ -0.71
USF1-204ENST00000472217 SYNRGQ9UMZ2 1314 aa10.62□□□□□ -0.71
USF1-204ENST00000472217 POTEB2H3BUK9 544 aa10.62□□□□□ -0.71
USF1-204ENST00000472217 KDM4AO75164 1064 aa10.62□□□□□ -0.71
USF1-204ENST00000472217 ADAMTS4O75173 837 aa10.62□□□□□ -0.71
USF1-204ENST00000472217 ICAM1P05362 532 aa10.62□□□□□ -0.71
USF1-204ENST00000472217 PDHBP11177 359 aa10.62□□□□□ -0.71
USF1-204ENST00000472217 SNX17Q15036 470 aa10.62□□□□□ -0.71
USF1-204ENST00000472217 MUM1L1Q5H9M0 696 aa10.62□□□□□ -0.71
USF1-204ENST00000472217 SYDE2Q5VT97 1194 aa10.62□□□□□ -0.71
USF1-204ENST00000472217 BTNL9Q6UXG8 535 aa10.62□□□□□ -0.71
USF1-204ENST00000472217 SLC39A5Q6ZMH5 540 aa10.62□□□□□ -0.71
USF1-204ENST00000472217 ARMCX2Q7L311 632 aa10.62□□□□□ -0.71
USF1-204ENST00000472217 RNF180Q86T96 592 aa10.62□□□□□ -0.71
USF1-204ENST00000472217 CCDC144CPQ8IYA2 1237 aa10.62□□□□□ -0.71
USF1-204ENST00000472217 FAM133AQ8N9E0 248 aa10.62□□□□□ -0.71
USF1-204ENST00000472217 TTC14Q96N46 770 aa10.62□□□□□ -0.71
USF1-204ENST00000472217 ZKSCAN3Q9BRR0 538 aa10.62□□□□□ -0.71
USF1-204ENST00000472217 RANBP17Q9H2T7 1088 aaKnown RBP10.62□□□□□ -0.71
USF1-204ENST00000472217 GPCPD1Q9NPB8 672 aa10.62□□□□□ -0.71
USF1-204ENST00000472217 FAM184BQ9ULE4 1060 aa10.62□□□□□ -0.71
USF1-204ENST00000472217 CCPG1Q9ULG6 757 aa10.62□□□□□ -0.71
USF1-204ENST00000472217 PHF24Q9UPV7 400 aa10.62□□□□□ -0.71
USF1-204ENST00000472217 ATP11BQ9Y2G3 1177 aa10.62□□□□□ -0.71
USF1-204ENST00000472217 LTBP2Q14767 1821 aa10.62□□□□□ -0.71
USF1-204ENST00000472217 TRIOBPQ9H2D6 2365 aa10.62□□□□□ -0.71
USF1-204ENST00000472217 LCTP09848 1927 aa10.62□□□□□ -0.71
USF1-204ENST00000472217 ASTN1O14525 1302 aa10.61□□□□□ -0.71
USF1-204ENST00000472217 MCM3APO60318 1980 aa10.61□□□□□ -0.71
USF1-204ENST00000472217 SOWAHBA6NEL2 793 aa10.61□□□□□ -0.71
USF1-204ENST00000472217 B4E1Z4 1266 aa10.61□□□□□ -0.71
USF1-204ENST00000472217 SOX1O00570 391 aaPredicted RBP10.61□□□□□ -0.71
USF1-204ENST00000472217 ADCY6O43306 1168 aa10.61□□□□□ -0.71
USF1-204ENST00000472217 SNHG28P0DPA3 235 aa10.61□□□□□ -0.71
USF1-204ENST00000472217 MDM2Q00987 491 aaPredicted RBP10.61□□□□□ -0.71
USF1-204ENST00000472217 ZNF543Q08ER8 600 aa10.61□□□□□ -0.71
USF1-204ENST00000472217 ACVR2BQ13705 512 aa10.61□□□□□ -0.71
USF1-204ENST00000472217 IMMTQ16891 758 aaKnown RBP10.61□□□□□ -0.71
USF1-204ENST00000472217 TRIM60Q495X7 471 aa10.61□□□□□ -0.71
USF1-204ENST00000472217 KATNBL1Q9H079 304 aa10.61□□□□□ -0.71
USF1-204ENST00000472217 ABHD16BQ9H3Z7 469 aa10.61□□□□□ -0.71
USF1-204ENST00000472217 SMCHD1A6NHR9 2005 aa10.61□□□□□ -0.71
USF1-204ENST00000472217 A0A1W2PQ45 241 aaPredicted RBP10.6□□□□□ -0.71
USF1-204ENST00000472217 A0A1W2PQY0 241 aa10.6□□□□□ -0.71
USF1-204ENST00000472217 MYADML2A6NDP7 307 aa10.6□□□□□ -0.71
USF1-204ENST00000472217 NT5C2P49902 561 aa10.6□□□□□ -0.71
USF1-204ENST00000472217 IRX5P78411 483 aaPredicted RBP10.6□□□□□ -0.71
USF1-204ENST00000472217 CCDC144BQ3MJ40 725 aa10.6□□□□□ -0.71
USF1-204ENST00000472217 C1orf53Q5VUE5 145 aa10.6□□□□□ -0.71
USF1-204ENST00000472217 NSMFQ6X4W1 530 aa10.6□□□□□ -0.71
USF1-204ENST00000472217 IQCA1Q86XH1 822 aa10.6□□□□□ -0.71
USF1-204ENST00000472217 DGKHQ86XP1 1220 aa10.6□□□□□ -0.71
USF1-204ENST00000472217 TDHQ8IZJ6 230 aa10.6□□□□□ -0.71
USF1-204ENST00000472217 UBE2OQ9C0C9 1292 aaKnown RBP10.6□□□□□ -0.71
USF1-204ENST00000472217 CYP39A1Q9NYL5 469 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms