RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 FGD4Q96M96 766 aa24.69■■□□□ 1.54
SREBF1-210ENST00000471445 ACAD9Q9H845 621 aa24.69■■□□□ 1.54
SREBF1-210ENST00000471445 TRIOBPQ9H2D6 2365 aa24.69■■□□□ 1.54
SREBF1-210ENST00000471445 ZNF865P0CJ78 1059 aaPredicted RBP24.68■■□□□ 1.54
SREBF1-210ENST00000471445 TAL1P17542 331 aaPredicted RBP24.68■■□□□ 1.54
SREBF1-210ENST00000471445 FXR1P51114 621 aaKnown RBP eCLIP24.68■■□□□ 1.54
SREBF1-210ENST00000471445 TKFCQ3LXA3 575 aa24.68■■□□□ 1.54
SREBF1-210ENST00000471445 BTNL9Q6UXG8 535 aa24.68■■□□□ 1.54
SREBF1-210ENST00000471445 ANKRD35Q8N283 1001 aa24.68■■□□□ 1.54
SREBF1-210ENST00000471445 AGBL1Q96MI9 1066 aa24.68■■□□□ 1.54
SREBF1-210ENST00000471445 TTC14Q96N46 770 aa24.68■■□□□ 1.54
SREBF1-210ENST00000471445 HOMER2Q9NSB8 354 aa24.68■■□□□ 1.54
SREBF1-210ENST00000471445 RNF146Q9NTX7 359 aa24.68■■□□□ 1.54
SREBF1-210ENST00000471445 PDHBP11177 359 aa24.67■■□□□ 1.54
SREBF1-210ENST00000471445 GJC2Q5T442 439 aaPredicted RBP24.67■■□□□ 1.54
SREBF1-210ENST00000471445 ARRDC4Q8NCT1 418 aa24.67■■□□□ 1.54
SREBF1-210ENST00000471445 RANBP17Q9H2T7 1088 aaKnown RBP24.67■■□□□ 1.54
SREBF1-210ENST00000471445 ZMYND8Q9ULU4 1186 aaPredicted RBP24.67■■□□□ 1.54
SREBF1-210ENST00000471445 SNAI1O95863 264 aaPredicted RBP24.66■■□□□ 1.54
SREBF1-210ENST00000471445 SNHG28P0DPA3 235 aa24.66■■□□□ 1.54
SREBF1-210ENST00000471445 IMMTQ16891 758 aaKnown RBP24.66■■□□□ 1.54
SREBF1-210ENST00000471445 TTBK2Q6IQ55 1244 aa24.66■■□□□ 1.54
SREBF1-210ENST00000471445 CCDC174Q6PII3 467 aa24.66■■□□□ 1.54
SREBF1-210ENST00000471445 SENP6Q9GZR1 1112 aaPredicted RBP24.66■■□□□ 1.54
SREBF1-210ENST00000471445 A1CFQ9NQ94 594 aaKnown RBP24.66■■□□□ 1.54
SREBF1-210ENST00000471445 CNPY2Q9Y2B0 182 aa24.66■■□□□ 1.54
SREBF1-210ENST00000471445 LTBP2Q14767 1821 aa24.65■■□□□ 1.54
SREBF1-210ENST00000471445 FRMPD2Q68DX3 1309 aaPredicted RBP24.65■■□□□ 1.54
SREBF1-210ENST00000471445 KBTBD13C9JR72 458 aa24.65■■□□□ 1.54
SREBF1-210ENST00000471445 RARBP10826 455 aa24.65■■□□□ 1.54
SREBF1-210ENST00000471445 AKR1A1P14550 325 aa24.65■■□□□ 1.54
SREBF1-210ENST00000471445 SNAP25P60880 206 aa24.65■■□□□ 1.54
SREBF1-210ENST00000471445 LRRC41Q15345 812 aa24.65■■□□□ 1.54
SREBF1-210ENST00000471445 CTNNA3Q9UI47 895 aa24.65■■□□□ 1.54
SREBF1-210ENST00000471445 ALAS1P13196 640 aa24.64■■□□□ 1.54
SREBF1-210ENST00000471445 SYDE2Q5VT97 1194 aa24.64■■□□□ 1.54
SREBF1-210ENST00000471445 DGKHQ86XP1 1220 aa24.64■■□□□ 1.54
SREBF1-210ENST00000471445 FAM133AQ8N9E0 248 aa24.64■■□□□ 1.54
SREBF1-210ENST00000471445 TRERF1Q96PN7 1200 aa24.64■■□□□ 1.54
SREBF1-210ENST00000471445 ZKSCAN3Q9BRR0 538 aa24.64■■□□□ 1.54
SREBF1-210ENST00000471445 XPNPEP3Q9NQH7 507 aa24.64■■□□□ 1.54
SREBF1-210ENST00000471445 A0A1W2PPC1 479 aa24.63■■□□□ 1.53
SREBF1-210ENST00000471445 B4E1Z4 1266 aa24.63■■□□□ 1.53
SREBF1-210ENST00000471445 KDM4AO75164 1064 aa24.63■■□□□ 1.53
SREBF1-210ENST00000471445 ICAM1P05362 532 aa24.63■■□□□ 1.53
SREBF1-210ENST00000471445 SYN1P17600 705 aa24.63■■□□□ 1.53
SREBF1-210ENST00000471445 SLC16A2P36021 539 aa24.63■■□□□ 1.53
SREBF1-210ENST00000471445 ZNF543Q08ER8 600 aa24.63■■□□□ 1.53
SREBF1-210ENST00000471445 IQCA1Q86XH1 822 aa24.63■■□□□ 1.53
SREBF1-210ENST00000471445 GDF15Q99988 308 aa24.63■■□□□ 1.53
SREBF1-210ENST00000471445 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.63■■□□□ 1.53
SREBF1-210ENST00000471445 CCPG1Q9ULG6 757 aa24.63■■□□□ 1.53
SREBF1-210ENST00000471445 CHMLP26374 656 aa24.62■■□□□ 1.53
SREBF1-210ENST00000471445 CCDC178Q5BJE1 867 aa24.62■■□□□ 1.53
SREBF1-210ENST00000471445 ARMCX2Q7L311 632 aa24.62■■□□□ 1.53
SREBF1-210ENST00000471445 LENG1Q96BZ8 264 aaPredicted RBP24.62■■□□□ 1.53
SREBF1-210ENST00000471445 GPCPD1Q9NPB8 672 aa24.62■■□□□ 1.53
SREBF1-210ENST00000471445 ZHX1Q9UKY1 873 aaPredicted RBP24.62■■□□□ 1.53
SREBF1-210ENST00000471445 MYH6P13533 1939 aa24.61■■□□□ 1.53
SREBF1-210ENST00000471445 POTEB2H3BUK9 544 aa24.61■■□□□ 1.53
SREBF1-210ENST00000471445 ADAMTS4O75173 837 aa24.61■■□□□ 1.53
SREBF1-210ENST00000471445 ATN1P54259 1190 aaPredicted RBP24.61■■□□□ 1.53
SREBF1-210ENST00000471445 CNTN2Q02246 1040 aa24.61■■□□□ 1.53
SREBF1-210ENST00000471445 SNX17Q15036 470 aa24.61■■□□□ 1.53
SREBF1-210ENST00000471445 MUM1L1Q5H9M0 696 aa24.61■■□□□ 1.53
SREBF1-210ENST00000471445 RUFY2Q8WXA3 655 aa24.61■■□□□ 1.53
SREBF1-210ENST00000471445 ANKS1AQ92625 1134 aa24.61■■□□□ 1.53
SREBF1-210ENST00000471445 BMP8BP34820 402 aa24.6■■□□□ 1.53
SREBF1-210ENST00000471445 RTP1P59025 263 aa24.6■■□□□ 1.53
SREBF1-210ENST00000471445 KRT23Q9C075 422 aa24.6■■□□□ 1.53
SREBF1-210ENST00000471445 KATNBL1Q9H079 304 aa24.6■■□□□ 1.53
SREBF1-210ENST00000471445 ABHD16BQ9H3Z7 469 aa24.6■■□□□ 1.53
SREBF1-210ENST00000471445 CNNM2Q9H8M5 875 aa24.6■■□□□ 1.53
SREBF1-210ENST00000471445 FAM184BQ9ULE4 1060 aa24.6■■□□□ 1.53
SREBF1-210ENST00000471445 PHF24Q9UPV7 400 aa24.6■■□□□ 1.53
SREBF1-210ENST00000471445 PGK1P00558 417 aa24.59■■□□□ 1.53
SREBF1-210ENST00000471445 MYCNP04198 464 aaPredicted RBP24.59■■□□□ 1.53
SREBF1-210ENST00000471445 ACVR2BQ13705 512 aa24.59■■□□□ 1.53
SREBF1-210ENST00000471445 GPATCH4Q5T3I0 446 aaKnown RBP24.59■■□□□ 1.53
SREBF1-210ENST00000471445 RNF180Q86T96 592 aa24.59■■□□□ 1.53
SREBF1-210ENST00000471445 CCDC144CPQ8IYA2 1237 aa24.59■■□□□ 1.53
SREBF1-210ENST00000471445 ENAHQ8N8S7 591 aaPredicted RBP24.59■■□□□ 1.53
SREBF1-210ENST00000471445 PNMA1Q8ND90 353 aa24.59■■□□□ 1.53
SREBF1-210ENST00000471445 ZSCAN10Q96SZ4 725 aaPredicted RBP24.59■■□□□ 1.53
SREBF1-210ENST00000471445 CYP39A1Q9NYL5 469 aa24.59■■□□□ 1.53
SREBF1-210ENST00000471445 ZSWIM5Q9P217 1185 aa24.59■■□□□ 1.53
SREBF1-210ENST00000471445 ASTN1O14525 1302 aa24.59■■□□□ 1.53
SREBF1-210ENST00000471445 TNKSO95271 1327 aa24.59■■□□□ 1.53
SREBF1-210ENST00000471445 WDR19Q8NEZ3 1342 aa24.59■■□□□ 1.53
SREBF1-210ENST00000471445 SYNRGQ9UMZ2 1314 aa24.59■■□□□ 1.53
SREBF1-210ENST00000471445 SOWAHBA6NEL2 793 aa24.58■■□□□ 1.53
SREBF1-210ENST00000471445 MAGEA10P43363 369 aaPredicted RBP24.58■■□□□ 1.53
SREBF1-210ENST00000471445 SLC39A5Q6ZMH5 540 aa24.58■■□□□ 1.53
SREBF1-210ENST00000471445 ADCY6O43306 1168 aa24.57■■□□□ 1.52
SREBF1-210ENST00000471445 ADCYAP1R1P41586 468 aa24.57■■□□□ 1.52
SREBF1-210ENST00000471445 C1orf53Q5VUE5 145 aa24.57■■□□□ 1.52
SREBF1-210ENST00000471445 PNMA2Q9UL42 364 aa24.57■■□□□ 1.52
SREBF1-210ENST00000471445 SGSM2O43147 1006 aa24.56■■□□□ 1.52
SREBF1-210ENST00000471445 DUSP11O75319 330 aaKnown RBP24.56■■□□□ 1.52
SREBF1-210ENST00000471445 PTH1RQ03431 593 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms