RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 ZNF467Q7Z7K2 595 aaPredicted RBP22.78■■□□□ 1.24
NCKIPSD-209ENST00000470006 UPF3AQ9H1J1 476 aaKnown RBP22.78■■□□□ 1.24
NCKIPSD-209ENST00000470006 CCL23P55773 120 aa22.77■■□□□ 1.24
NCKIPSD-209ENST00000470006 TFF2Q03403 129 aa22.77■■□□□ 1.24
NCKIPSD-209ENST00000470006 HSP90AB4PQ58FF6 505 aa22.77■■□□□ 1.24
NCKIPSD-209ENST00000470006 CEP85Q6P2H3 762 aa22.77■■□□□ 1.24
NCKIPSD-209ENST00000470006 ARMCX2Q7L311 632 aa22.77■■□□□ 1.24
NCKIPSD-209ENST00000470006 CLASRPQ8N2M8 674 aaKnown RBP22.77■■□□□ 1.24
NCKIPSD-209ENST00000470006 PRPF38AQ8NAV1 312 aaKnown RBP22.77■■□□□ 1.24
NCKIPSD-209ENST00000470006 ZBBXA8MT70 800 aa22.76■■□□□ 1.23
NCKIPSD-209ENST00000470006 STK11IPQ8N1F8 1099 aa22.76■■□□□ 1.23
NCKIPSD-209ENST00000470006 RHPN1Q8TCX5 695 aa22.76■■□□□ 1.23
NCKIPSD-209ENST00000470006 KIFC2Q96AC6 838 aa22.76■■□□□ 1.23
NCKIPSD-209ENST00000470006 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.76■■□□□ 1.23
NCKIPSD-209ENST00000470006 RAVER2Q9HCJ3 691 aaKnown RBP22.76■■□□□ 1.23
NCKIPSD-209ENST00000470006 SLC4A7Q9Y6M7 1214 aa22.76■■□□□ 1.23
NCKIPSD-209ENST00000470006 SLC4A4Q9Y6R1 1079 aa22.76■■□□□ 1.23
NCKIPSD-209ENST00000470006 CHD7Q9P2D1 2997 aa22.75■■□□□ 1.23
NCKIPSD-209ENST00000470006 CD4P01730 458 aa22.75■■□□□ 1.23
NCKIPSD-209ENST00000470006 BMP1P13497 986 aa22.75■■□□□ 1.23
NCKIPSD-209ENST00000470006 CXCL17Q6UXB2 119 aa22.75■■□□□ 1.23
NCKIPSD-209ENST00000470006 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.75■■□□□ 1.23
NCKIPSD-209ENST00000470006 PAG1Q9NWQ8 432 aa22.75■■□□□ 1.23
NCKIPSD-209ENST00000470006 UMODL1Q5DID0 1318 aa22.75■■□□□ 1.23
NCKIPSD-209ENST00000470006 F5H6K3 240 aa22.74■■□□□ 1.23
NCKIPSD-209ENST00000470006 MYOGP15173 224 aa22.74■■□□□ 1.23
NCKIPSD-209ENST00000470006 ADD2P35612 726 aa22.74■■□□□ 1.23
NCKIPSD-209ENST00000470006 TNFAIP2Q03169 654 aa22.74■■□□□ 1.23
NCKIPSD-209ENST00000470006 KLRC3Q07444 240 aa22.74■■□□□ 1.23
NCKIPSD-209ENST00000470006 CCDC144CPQ8IYA2 1237 aa22.74■■□□□ 1.23
NCKIPSD-209ENST00000470006 RPUSD2Q8IZ73 545 aaKnown RBP22.74■■□□□ 1.23
NCKIPSD-209ENST00000470006 MKNK2Q9HBH9 465 aa22.74■■□□□ 1.23
NCKIPSD-209ENST00000470006 FBXO40Q9UH90 709 aa22.74■■□□□ 1.23
NCKIPSD-209ENST00000470006 KCNQ1P51787 676 aa22.73■■□□□ 1.23
NCKIPSD-209ENST00000470006 ITGA7Q13683 1181 aa22.73■■□□□ 1.23
NCKIPSD-209ENST00000470006 CTR9Q6PD62 1173 aa22.73■■□□□ 1.23
NCKIPSD-209ENST00000470006 BOLA2Q9H3K6 86 aa22.73■■□□□ 1.23
NCKIPSD-209ENST00000470006 HOMER2Q9NSB8 354 aa22.73■■□□□ 1.23
NCKIPSD-209ENST00000470006 HCN4Q9Y3Q4 1203 aa22.73■■□□□ 1.23
NCKIPSD-209ENST00000470006 REV3LO60673 3130 aa22.73■■□□□ 1.23
NCKIPSD-209ENST00000470006 GTPBP6O43824 516 aaPredicted RBP22.72■■□□□ 1.23
NCKIPSD-209ENST00000470006 CABYRO75952 493 aa22.72■■□□□ 1.23
NCKIPSD-209ENST00000470006 NDUFB10O96000 172 aa22.72■■□□□ 1.23
NCKIPSD-209ENST00000470006 AP5M1Q9H0R1 490 aa22.72■■□□□ 1.23
NCKIPSD-209ENST00000470006 ISY1Q9ULR0 285 aaKnown RBP22.72■■□□□ 1.23
NCKIPSD-209ENST00000470006 PCDHA11Q9Y5I1 949 aa22.72■■□□□ 1.23
NCKIPSD-209ENST00000470006 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.71■■□□□ 1.23
NCKIPSD-209ENST00000470006 ATP2A1O14983 1001 aa22.71■■□□□ 1.23
NCKIPSD-209ENST00000470006 ZEB2O60315 1214 aa22.71■■□□□ 1.23
NCKIPSD-209ENST00000470006 RLBP1P12271 317 aa22.71■■□□□ 1.23
NCKIPSD-209ENST00000470006 CHST13Q8NET6 341 aa22.71■■□□□ 1.23
NCKIPSD-209ENST00000470006 KIF1BPQ96EK5 621 aa22.71■■□□□ 1.23
NCKIPSD-209ENST00000470006 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.71■■□□□ 1.23
NCKIPSD-209ENST00000470006 TRPV6Q9H1D0 765 aa22.71■■□□□ 1.23
NCKIPSD-209ENST00000470006 CLIP2Q9UDT6 1046 aa22.71■■□□□ 1.23
NCKIPSD-209ENST00000470006 XIRP2A4UGR9 3374 aa22.71■■□□□ 1.23
NCKIPSD-209ENST00000470006 CTAGE5O15320 804 aa22.7■■□□□ 1.22
NCKIPSD-209ENST00000470006 ATP2A2P16615 1042 aaKnown RBP22.7■■□□□ 1.22
NCKIPSD-209ENST00000470006 HOXD11P31277 338 aaPredicted RBP22.7■■□□□ 1.22
NCKIPSD-209ENST00000470006 CNTN2Q02246 1040 aa22.7■■□□□ 1.22
NCKIPSD-209ENST00000470006 FSCN1Q16658 493 aaKnown RBP22.7■■□□□ 1.22
NCKIPSD-209ENST00000470006 TLK2Q86UE8 772 aa22.7■■□□□ 1.22
NCKIPSD-209ENST00000470006 FGD4Q96M96 766 aa22.7■■□□□ 1.22
NCKIPSD-209ENST00000470006 NOC4LQ9BVI4 516 aaKnown RBP22.7■■□□□ 1.22
NCKIPSD-209ENST00000470006 CERS4Q9HA82 394 aa22.7■■□□□ 1.22
NCKIPSD-209ENST00000470006 NYAP2Q9P242 653 aa22.7■■□□□ 1.22
NCKIPSD-209ENST00000470006 RFXAPO00287 272 aa22.69■■□□□ 1.22
NCKIPSD-209ENST00000470006 DYNC1LI2O43237 492 aaPredicted RBP22.69■■□□□ 1.22
NCKIPSD-209ENST00000470006 CHGBP05060 677 aa22.69■■□□□ 1.22
NCKIPSD-209ENST00000470006 SLC43A3Q8NBI5 491 aa22.69■■□□□ 1.22
NCKIPSD-209ENST00000470006 SCLYQ96I15 445 aa22.69■■□□□ 1.22
NCKIPSD-209ENST00000470006 SLC38A10Q9HBR0 1119 aa22.69■■□□□ 1.22
NCKIPSD-209ENST00000470006 ARPP21Q9UBL0 812 aaPredicted RBP22.69■■□□□ 1.22
NCKIPSD-209ENST00000470006 PRRC2BQ5JSZ5 2229 aaKnown RBP22.69■■□□□ 1.22
NCKIPSD-209ENST00000470006 MINDY4BA8MYZ0 360 aa22.68■■□□□ 1.22
NCKIPSD-209ENST00000470006 ERC2O15083 957 aa22.68■■□□□ 1.22
NCKIPSD-209ENST00000470006 B4GALT4O60513 344 aa22.68■■□□□ 1.22
NCKIPSD-209ENST00000470006 TMEM67Q5HYA8 995 aa22.68■■□□□ 1.22
NCKIPSD-209ENST00000470006 LRFN3Q9BTN0 628 aa22.68■■□□□ 1.22
NCKIPSD-209ENST00000470006 WNT8AQ9H1J5 351 aa22.68■■□□□ 1.22
NCKIPSD-209ENST00000470006 EPHX3Q9H6B9 360 aa22.68■■□□□ 1.22
NCKIPSD-209ENST00000470006 FEM1BQ9UK73 627 aa22.68■■□□□ 1.22
NCKIPSD-209ENST00000470006 MYH4Q9Y623 1939 aa22.68■■□□□ 1.22
NCKIPSD-209ENST00000470006 ASTN1O14525 1302 aa22.67■■□□□ 1.22
NCKIPSD-209ENST00000470006 RASA1P20936 1047 aa22.67■■□□□ 1.22
NCKIPSD-209ENST00000470006 PSMC6P62333 389 aa22.67■■□□□ 1.22
NCKIPSD-209ENST00000470006 UBE3CQ15386 1083 aa22.67■■□□□ 1.22
NCKIPSD-209ENST00000470006 SEZ6LQ9BYH1 1024 aa22.67■■□□□ 1.22
NCKIPSD-209ENST00000470006 KATNBL1Q9H079 304 aa22.67■■□□□ 1.22
NCKIPSD-209ENST00000470006 COG6Q9Y2V7 657 aa22.67■■□□□ 1.22
NCKIPSD-209ENST00000470006 MYH7P12883 1935 aa22.67■■□□□ 1.22
NCKIPSD-209ENST00000470006 ASB14A6NK59 587 aa22.66■■□□□ 1.22
NCKIPSD-209ENST00000470006 CA3P07451 260 aa22.66■■□□□ 1.22
NCKIPSD-209ENST00000470006 OAZ1P54368 228 aa22.66■■□□□ 1.22
NCKIPSD-209ENST00000470006 NKX3-2P78367 333 aa22.66■■□□□ 1.22
NCKIPSD-209ENST00000470006 TMEM31Q5JXX7 168 aa22.66■■□□□ 1.22
NCKIPSD-209ENST00000470006 ZSCAN25Q6NSZ9 544 aa22.66■■□□□ 1.22
NCKIPSD-209ENST00000470006 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.66■■□□□ 1.22
NCKIPSD-209ENST00000470006 DEFB128Q7Z7B8 93 aa22.66■■□□□ 1.22
NCKIPSD-209ENST00000470006 ACAD9Q9H845 621 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms