RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 C9orf50Q5SZB4 431 aa15.73■□□□□ 0.11
CPSF4-210ENST00000469897 B4GALNT3Q6L9W6 998 aa15.73■□□□□ 0.11
CPSF4-210ENST00000469897 KLHDC9Q8NEP7 349 aa15.73■□□□□ 0.11
CPSF4-210ENST00000469897 FGD4Q96M96 766 aa15.73■□□□□ 0.11
CPSF4-210ENST00000469897 TSEN34Q9BSV6 310 aaKnown RBP15.73■□□□□ 0.11
CPSF4-210ENST00000469897 TOMM22Q9NS69 142 aa15.73■□□□□ 0.11
CPSF4-210ENST00000469897 PLIN4Q96Q06 1357 aa15.73■□□□□ 0.11
CPSF4-210ENST00000469897 ZNF536O15090 1300 aa15.72■□□□□ 0.11
CPSF4-210ENST00000469897 SYNRGQ9UMZ2 1314 aa15.72■□□□□ 0.11
CPSF4-210ENST00000469897 MYADML2A6NDP7 307 aa15.72■□□□□ 0.11
CPSF4-210ENST00000469897 PQBP1O60828 265 aaKnown RBP15.72■□□□□ 0.11
CPSF4-210ENST00000469897 DUSP11O75319 330 aaKnown RBP15.72■□□□□ 0.11
CPSF4-210ENST00000469897 ALAS1P13196 640 aa15.72■□□□□ 0.11
CPSF4-210ENST00000469897 CCDC144BQ3MJ40 725 aa15.72■□□□□ 0.11
CPSF4-210ENST00000469897 CCSAPQ6IQ19 270 aaPredicted RBP15.72■□□□□ 0.11
CPSF4-210ENST00000469897 CCDC174Q6PII3 467 aa15.72■□□□□ 0.11
CPSF4-210ENST00000469897 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.72■□□□□ 0.11
CPSF4-210ENST00000469897 CCDC144CPQ8IYA2 1237 aa15.72■□□□□ 0.11
CPSF4-210ENST00000469897 TRERF1Q96PN7 1200 aa15.72■□□□□ 0.11
CPSF4-210ENST00000469897 LNPKQ9C0E8 428 aa15.72■□□□□ 0.11
CPSF4-210ENST00000469897 ABHD16BQ9H3Z7 469 aa15.72■□□□□ 0.11
CPSF4-210ENST00000469897 ACAD9Q9H845 621 aa15.72■□□□□ 0.11
CPSF4-210ENST00000469897 STARD7Q9NQZ5 370 aa15.72■□□□□ 0.11
CPSF4-210ENST00000469897 RNF146Q9NTX7 359 aa15.72■□□□□ 0.11
CPSF4-210ENST00000469897 PRR12Q9ULL5 1215 aa15.72■□□□□ 0.11
CPSF4-210ENST00000469897 ZNF236Q9UL36 1845 aa15.72■□□□□ 0.11
CPSF4-210ENST00000469897 A0A0D9SFI3 127 aa15.71■□□□□ 0.11
CPSF4-210ENST00000469897 SOWAHBA6NEL2 793 aa15.71■□□□□ 0.11
CPSF4-210ENST00000469897 TRIM6-TRIM34B2RNG4 842 aa15.71■□□□□ 0.11
CPSF4-210ENST00000469897 ADCY6O43306 1168 aa15.71■□□□□ 0.11
CPSF4-210ENST00000469897 ORC4O43929 436 aa15.71■□□□□ 0.11
CPSF4-210ENST00000469897 PLA2G6O60733 806 aa15.71■□□□□ 0.11
CPSF4-210ENST00000469897 CLTBP09497 229 aa15.71■□□□□ 0.11
CPSF4-210ENST00000469897 FGRP09769 529 aa15.71■□□□□ 0.11
CPSF4-210ENST00000469897 NMIQ13287 307 aaPredicted RBP15.71■□□□□ 0.11
CPSF4-210ENST00000469897 RRP12Q5JTH9 1297 aaKnown RBP15.71■□□□□ 0.11
CPSF4-210ENST00000469897 ARMCX2Q7L311 632 aa15.71■□□□□ 0.11
CPSF4-210ENST00000469897 RASGRP2Q7LDG7 609 aa15.71■□□□□ 0.11
CPSF4-210ENST00000469897 FAM133AQ8N9E0 248 aa15.71■□□□□ 0.11
CPSF4-210ENST00000469897 NUP133Q8WUM0 1156 aa15.71■□□□□ 0.11
CPSF4-210ENST00000469897 RILPL2Q969X0 211 aa15.71■□□□□ 0.11
CPSF4-210ENST00000469897 FAM161BQ96MY7 647 aa15.71■□□□□ 0.11
CPSF4-210ENST00000469897 A1CFQ9NQ94 594 aaKnown RBP15.71■□□□□ 0.11
CPSF4-210ENST00000469897 TMEM39AQ9NV64 488 aa15.71■□□□□ 0.11
CPSF4-210ENST00000469897 STXBP5LQ9Y2K9 1186 aa15.71■□□□□ 0.11
CPSF4-210ENST00000469897 MOXD2PA6NHM9 499 aa15.7■□□□□ 0.1
CPSF4-210ENST00000469897 IGHDP01880 384 aa15.7■□□□□ 0.1
CPSF4-210ENST00000469897 C6orf222P0C671 652 aaPredicted RBP15.7■□□□□ 0.1
CPSF4-210ENST00000469897 HSPD1P10809 573 aaKnown RBP15.7■□□□□ 0.1
CPSF4-210ENST00000469897 RAG1P15918 1043 aa15.7■□□□□ 0.1
CPSF4-210ENST00000469897 SLC16A2P36021 539 aa15.7■□□□□ 0.1
CPSF4-210ENST00000469897 NOVP48745 357 aa15.7■□□□□ 0.1
CPSF4-210ENST00000469897 FAAP100Q0VG06 881 aa15.7■□□□□ 0.1
CPSF4-210ENST00000469897 MUM1L1Q5H9M0 696 aa15.7■□□□□ 0.1
CPSF4-210ENST00000469897 TTBK2Q6IQ55 1244 aa15.7■□□□□ 0.1
CPSF4-210ENST00000469897 ZNF589Q86UQ0 364 aaPredicted RBP15.7■□□□□ 0.1
CPSF4-210ENST00000469897 VTI1AQ96AJ9 217 aa15.7■□□□□ 0.1
CPSF4-210ENST00000469897 RWDD1Q9H446 243 aaPredicted RBP15.7■□□□□ 0.1
CPSF4-210ENST00000469897 SPC25Q9HBM1 224 aa15.7■□□□□ 0.1
CPSF4-210ENST00000469897 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.69■□□□□ 0.1
CPSF4-210ENST00000469897 DCDC2CA8MYV0 355 aa15.69■□□□□ 0.1
CPSF4-210ENST00000469897 KIAA0355O15063 1070 aa15.69■□□□□ 0.1
CPSF4-210ENST00000469897 ASGR1P07306 291 aa15.69■□□□□ 0.1
CPSF4-210ENST00000469897 EPHB4P54760 987 aa15.69■□□□□ 0.1
CPSF4-210ENST00000469897 GJA9P57773 515 aa15.69■□□□□ 0.1
CPSF4-210ENST00000469897 HAND2P61296 217 aa15.69■□□□□ 0.1
CPSF4-210ENST00000469897 CCDC96Q2M329 555 aa15.69■□□□□ 0.1
CPSF4-210ENST00000469897 TKFCQ3LXA3 575 aa15.69■□□□□ 0.1
CPSF4-210ENST00000469897 GNASQ5JWF2 1037 aa15.69■□□□□ 0.1
CPSF4-210ENST00000469897 ANKRD33Q7Z3H0 272 aa15.69■□□□□ 0.1
CPSF4-210ENST00000469897 GLT1D1Q96MS3 346 aa15.69■□□□□ 0.1
CPSF4-210ENST00000469897 TOX2Q96NM4 488 aa15.69■□□□□ 0.1
CPSF4-210ENST00000469897 TMEM47Q9BQJ4 181 aa15.69■□□□□ 0.1
CPSF4-210ENST00000469897 KATNBL1Q9H079 304 aa15.69■□□□□ 0.1
CPSF4-210ENST00000469897 GPCPD1Q9NPB8 672 aa15.69■□□□□ 0.1
CPSF4-210ENST00000469897 DDX49Q9Y6V7 483 aaKnown RBP15.69■□□□□ 0.1
CPSF4-210ENST00000469897 LAMA3Q16787 3333 aa15.68■□□□□ 0.1
CPSF4-210ENST00000469897 TNFAIP2Q03169 654 aa15.68■□□□□ 0.1
CPSF4-210ENST00000469897 FAM109BQ6ICB4 259 aaPredicted RBP15.68■□□□□ 0.1
CPSF4-210ENST00000469897 NOL8Q76FK4 1167 aaKnown RBP15.68■□□□□ 0.1
CPSF4-210ENST00000469897 PCSK9Q8NBP7 692 aaKnown RBP15.68■□□□□ 0.1
CPSF4-210ENST00000469897 DCAF4Q8WV16 495 aa15.68■□□□□ 0.1
CPSF4-210ENST00000469897 PURBQ96QR8 312 aaKnown RBP15.68■□□□□ 0.1
CPSF4-210ENST00000469897 CCPG1Q9ULG6 757 aa15.68■□□□□ 0.1
CPSF4-210ENST00000469897 FRMPD2Q68DX3 1309 aaPredicted RBP15.68■□□□□ 0.1
CPSF4-210ENST00000469897 ASB14A6NK59 587 aa15.67■□□□□ 0.1
CPSF4-210ENST00000469897 CTAGE5O15320 804 aa15.67■□□□□ 0.1
CPSF4-210ENST00000469897 TOP1P11387 765 aaKnown RBP15.67■□□□□ 0.1
CPSF4-210ENST00000469897 SDSP20132 328 aa15.67■□□□□ 0.1
CPSF4-210ENST00000469897 PTGS1P23219 599 aa15.67■□□□□ 0.1
CPSF4-210ENST00000469897 CST5P28325 142 aaPredicted RBP15.67■□□□□ 0.1
CPSF4-210ENST00000469897 CDK7P50613 346 aa15.67■□□□□ 0.1
CPSF4-210ENST00000469897 BEX3Q00994 111 aa15.67■□□□□ 0.1
CPSF4-210ENST00000469897 NSMFQ6X4W1 530 aa15.67■□□□□ 0.1
CPSF4-210ENST00000469897 EEPD1Q7L9B9 569 aa15.67■□□□□ 0.1
CPSF4-210ENST00000469897 CHD1LQ86WJ1 897 aa15.67■□□□□ 0.1
CPSF4-210ENST00000469897 TICAM2Q86XR7 235 aa15.67■□□□□ 0.1
CPSF4-210ENST00000469897 SMC5Q8IY18 1101 aa15.67■□□□□ 0.1
CPSF4-210ENST00000469897 GUCD1Q96NT3 240 aa15.67■□□□□ 0.1
CPSF4-210ENST00000469897 UPF3AQ9H1J1 476 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms