RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 IREB2P48200 963 aaKnown RBP10.85□□□□□ -0.67
HDAC3-205ENST00000469550 LMAN1P49257 510 aa10.85□□□□□ -0.67
HDAC3-205ENST00000469550 SARSP49591 514 aaKnown RBP10.85□□□□□ -0.67
HDAC3-205ENST00000469550 ANTXR2P58335 489 aa10.85□□□□□ -0.67
HDAC3-205ENST00000469550 HDLBPQ00341 1268 aaKnown RBP10.85□□□□□ -0.67
HDAC3-205ENST00000469550 RASA3Q14644 834 aa10.85□□□□□ -0.67
HDAC3-205ENST00000469550 NR1I3Q14994 352 aa10.85□□□□□ -0.67
HDAC3-205ENST00000469550 LONRF3Q496Y0 759 aa10.85□□□□□ -0.67
HDAC3-205ENST00000469550 MFSD14BQ5SR56 506 aa10.85□□□□□ -0.67
HDAC3-205ENST00000469550 NBPF12Q5TAG4 269 aaPredicted RBP10.85□□□□□ -0.67
HDAC3-205ENST00000469550 LEKR1Q6ZMV7 388 aa10.85□□□□□ -0.67
HDAC3-205ENST00000469550 VPS37DQ86XT2 251 aa10.85□□□□□ -0.67
HDAC3-205ENST00000469550 CCDC12Q8WUD4 166 aaPredicted RBP10.85□□□□□ -0.67
HDAC3-205ENST00000469550 OSBP2Q969R2 916 aa10.85□□□□□ -0.67
HDAC3-205ENST00000469550 CLMNQ96JQ2 1002 aa10.85□□□□□ -0.67
HDAC3-205ENST00000469550 NEUROD6Q96NK8 337 aa10.85□□□□□ -0.67
HDAC3-205ENST00000469550 GBP3Q9H0R5 595 aa10.85□□□□□ -0.67
HDAC3-205ENST00000469550 R3HDMLQ9H3Y0 253 aa10.85□□□□□ -0.67
HDAC3-205ENST00000469550 ANKZF1Q9H8Y5 726 aa10.85□□□□□ -0.67
HDAC3-205ENST00000469550 L1RE1Q9UN81 338 aa10.85□□□□□ -0.67
HDAC3-205ENST00000469550 TNRC18O15417 2968 aaPredicted RBP10.84□□□□□ -0.67
HDAC3-205ENST00000469550 PDE4DIPQ5VU43 2346 aa10.84□□□□□ -0.67
HDAC3-205ENST00000469550 FOXP2O15409 715 aa10.84□□□□□ -0.67
HDAC3-205ENST00000469550 ERCC5P28715 1186 aaPredicted RBP10.84□□□□□ -0.67
HDAC3-205ENST00000469550 PDE4BQ07343 736 aa10.84□□□□□ -0.67
HDAC3-205ENST00000469550 GOLGA8FQ08AF8 430 aa10.84□□□□□ -0.67
HDAC3-205ENST00000469550 GOLGA8DPQ0D2H9 430 aa10.84□□□□□ -0.67
HDAC3-205ENST00000469550 KRT40Q6A162 431 aa10.84□□□□□ -0.67
HDAC3-205ENST00000469550 CPLX2Q6PUV4 134 aaKnown RBP10.84□□□□□ -0.67
HDAC3-205ENST00000469550 FBXO33Q7Z6M2 555 aa10.84□□□□□ -0.67
HDAC3-205ENST00000469550 ANKRD13AQ8IZ07 590 aa10.84□□□□□ -0.67
HDAC3-205ENST00000469550 VGLL2Q8N8G2 317 aa10.84□□□□□ -0.67
HDAC3-205ENST00000469550 ALG1Q9BT22 464 aa10.84□□□□□ -0.67
HDAC3-205ENST00000469550 PUS3Q9BZE2 481 aaKnown RBP10.84□□□□□ -0.67
HDAC3-205ENST00000469550 VEZTQ9HBM0 779 aa10.84□□□□□ -0.67
HDAC3-205ENST00000469550 RAI14Q9P0K7 980 aa10.84□□□□□ -0.67
HDAC3-205ENST00000469550 ZNF70Q9UC06 446 aaPredicted RBP10.84□□□□□ -0.67
HDAC3-205ENST00000469550 FZD1Q9UP38 647 aa10.84□□□□□ -0.67
HDAC3-205ENST00000469550 RRP15Q9Y3B9 282 aaKnown RBP10.84□□□□□ -0.67
HDAC3-205ENST00000469550 MYH13Q9UKX3 1938 aa10.84□□□□□ -0.67
HDAC3-205ENST00000469550 A0A1B0GTH6 734 aa10.83□□□□□ -0.68
HDAC3-205ENST00000469550 AKR1B15C9JRZ8 316 aaPredicted RBP10.83□□□□□ -0.68
HDAC3-205ENST00000469550 IGF2BP3O00425 579 aaKnown RBP eCLIP10.83□□□□□ -0.68
HDAC3-205ENST00000469550 FGAP02671 866 aa10.83□□□□□ -0.68
HDAC3-205ENST00000469550 TNNT3P45378 269 aaPredicted RBP10.83□□□□□ -0.68
HDAC3-205ENST00000469550 NOP2P46087 812 aaKnown RBP10.83□□□□□ -0.68
HDAC3-205ENST00000469550 GYG1P46976 350 aa10.83□□□□□ -0.68
HDAC3-205ENST00000469550 MORC3Q14149 939 aa10.83□□□□□ -0.68
HDAC3-205ENST00000469550 RALYLQ86SE5 291 aaKnown RBP10.83□□□□□ -0.68
HDAC3-205ENST00000469550 PDILTQ8N807 584 aa10.83□□□□□ -0.68
HDAC3-205ENST00000469550 TEPSINQ96N21 525 aa10.83□□□□□ -0.68
HDAC3-205ENST00000469550 GJB4Q9NTQ9 266 aa10.83□□□□□ -0.68
HDAC3-205ENST00000469550 RSPH14Q9UHP6 348 aa10.83□□□□□ -0.68
HDAC3-205ENST00000469550 MAN1B1Q9UKM7 699 aa10.83□□□□□ -0.68
HDAC3-205ENST00000469550 TTF2Q9UNY4 1162 aaKnown RBP10.83□□□□□ -0.68
HDAC3-205ENST00000469550 NFE2L3Q9Y4A8 694 aa10.83□□□□□ -0.68
HDAC3-205ENST00000469550 ADGRG1Q9Y653 693 aa10.83□□□□□ -0.68
HDAC3-205ENST00000469550 EYA2O00167 538 aa10.83□□□□□ -0.68
HDAC3-205ENST00000469550 KIF5CO60282 957 aa10.83□□□□□ -0.68
HDAC3-205ENST00000469550 FECHP22830 423 aa10.83□□□□□ -0.68
HDAC3-205ENST00000469550 CDC27P30260 824 aa10.83□□□□□ -0.68
HDAC3-205ENST00000469550 GJA5P36382 358 aa10.83□□□□□ -0.68
HDAC3-205ENST00000469550 ADKP55263 362 aaKnown RBP10.83□□□□□ -0.68
HDAC3-205ENST00000469550 TIMM10P62072 90 aa10.83□□□□□ -0.68
HDAC3-205ENST00000469550 KANK3Q6NY19 840 aa10.83□□□□□ -0.68
HDAC3-205ENST00000469550 GOLGA6L1Q8N7Z2 621 aa10.83□□□□□ -0.68
HDAC3-205ENST00000469550 KRI1Q8N9T8 703 aaKnown RBP10.83□□□□□ -0.68
HDAC3-205ENST00000469550 TBC1D22AQ8WUA7 517 aa10.83□□□□□ -0.68
HDAC3-205ENST00000469550 MRIQ9BWK5 157 aa10.83□□□□□ -0.68
HDAC3-205ENST00000469550 MRPL44Q9H9J2 332 aaKnown RBP10.83□□□□□ -0.68
HDAC3-205ENST00000469550 JAG2Q9Y219 1238 aa10.83□□□□□ -0.68
HDAC3-205ENST00000469550 ZNF213O14771 459 aa10.82□□□□□ -0.68
HDAC3-205ENST00000469550 CRKP46108 304 aa10.82□□□□□ -0.68
HDAC3-205ENST00000469550 RBM5P52756 815 aaKnown RBP eCLIP10.82□□□□□ -0.68
HDAC3-205ENST00000469550 POSTNQ15063 836 aa10.82□□□□□ -0.68
HDAC3-205ENST00000469550 TTC39AQ5SRH9 613 aa10.82□□□□□ -0.68
HDAC3-205ENST00000469550 PRPF38BQ5VTL8 546 aaKnown RBP10.82□□□□□ -0.68
HDAC3-205ENST00000469550 RASGRP2Q7LDG7 609 aa10.82□□□□□ -0.68
HDAC3-205ENST00000469550 ZNF579Q8NAF0 562 aaKnown RBP10.82□□□□□ -0.68
HDAC3-205ENST00000469550 FAM71BQ8TC56 605 aa10.82□□□□□ -0.68
HDAC3-205ENST00000469550 APPBP2Q92624 585 aa10.82□□□□□ -0.68
HDAC3-205ENST00000469550 CCDC51Q96ER9 411 aa10.82□□□□□ -0.68
HDAC3-205ENST00000469550 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.82□□□□□ -0.68
HDAC3-205ENST00000469550 ACBD3Q9H3P7 528 aa10.82□□□□□ -0.68
HDAC3-205ENST00000469550 PDE11AQ9HCR9 933 aa10.82□□□□□ -0.68
HDAC3-205ENST00000469550 MED4Q9NPJ6 270 aa10.82□□□□□ -0.68
HDAC3-205ENST00000469550 MYO1AQ9UBC5 1043 aa10.82□□□□□ -0.68
HDAC3-205ENST00000469550 LCMT1Q9UIC8 334 aa10.82□□□□□ -0.68
HDAC3-205ENST00000469550 FBXO3Q9UK99 471 aa10.82□□□□□ -0.68
HDAC3-205ENST00000469550 A0A1B0GUL7 405 aa10.81□□□□□ -0.68
HDAC3-205ENST00000469550 MAGEA9P43362 315 aa10.81□□□□□ -0.68
HDAC3-205ENST00000469550 TNNI2P48788 182 aa10.81□□□□□ -0.68
HDAC3-205ENST00000469550 WHAMMP3Q1A5X7 153 aa10.81□□□□□ -0.68
HDAC3-205ENST00000469550 C10orf67Q8IYJ2 551 aa10.81□□□□□ -0.68
HDAC3-205ENST00000469550 SPATA20Q8TB22 786 aa10.81□□□□□ -0.68
HDAC3-205ENST00000469550 VPS18Q9P253 973 aa10.81□□□□□ -0.68
HDAC3-205ENST00000469550 SUGT1Q9Y2Z0 365 aa10.81□□□□□ -0.68
HDAC3-205ENST00000469550 STK36Q9NRP7 1315 aa10.81□□□□□ -0.68
HDAC3-205ENST00000469550 TRIM66O15016 1216 aa10.81□□□□□ -0.68
HDAC3-205ENST00000469550 SEMA3EO15041 775 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms