RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 KLRF2D3W0D1 207 aa16.92■□□□□ 0.3
SQSTM1-205ENST00000464493 DDAH1O94760 285 aa16.92■□□□□ 0.3
SQSTM1-205ENST00000464493 ICAM1P05362 532 aa16.92■□□□□ 0.3
SQSTM1-205ENST00000464493 XRCC5P13010 732 aaKnown RBP16.92■□□□□ 0.3
SQSTM1-205ENST00000464493 CASTP20810 708 aaKnown RBP16.92■□□□□ 0.3
SQSTM1-205ENST00000464493 FGD1P98174 961 aa16.92■□□□□ 0.3
SQSTM1-205ENST00000464493 MAP2K5Q13163 448 aa16.92■□□□□ 0.3
SQSTM1-205ENST00000464493 C8orf34Q49A92 452 aa16.92■□□□□ 0.3
SQSTM1-205ENST00000464493 SGMS1Q86VZ5 419 aa16.92■□□□□ 0.3
SQSTM1-205ENST00000464493 ADGRF4Q8IZF3 695 aa16.92■□□□□ 0.3
SQSTM1-205ENST00000464493 ABRAQ8N0Z2 381 aa16.92■□□□□ 0.3
SQSTM1-205ENST00000464493 SH3TC2Q8TF17 1288 aa16.92■□□□□ 0.3
SQSTM1-205ENST00000464493 MAP3K14Q99558 947 aa16.92■□□□□ 0.3
SQSTM1-205ENST00000464493 SLC12A7Q9Y666 1083 aa16.92■□□□□ 0.3
SQSTM1-205ENST00000464493 ELNP15502 786 aa16.91■□□□□ 0.3
SQSTM1-205ENST00000464493 RPS6KB1P23443 525 aa16.91■□□□□ 0.3
SQSTM1-205ENST00000464493 ADORA2AP29274 412 aa16.91■□□□□ 0.3
SQSTM1-205ENST00000464493 TKFCQ3LXA3 575 aa16.91■□□□□ 0.3
SQSTM1-205ENST00000464493 SYNE3Q6ZMZ3 975 aa16.91■□□□□ 0.3
SQSTM1-205ENST00000464493 DPP9Q86TI2 863 aa16.91■□□□□ 0.3
SQSTM1-205ENST00000464493 CHST13Q8NET6 341 aa16.91■□□□□ 0.3
SQSTM1-205ENST00000464493 ARMC5Q96C12 935 aa16.91■□□□□ 0.3
SQSTM1-205ENST00000464493 MMP19Q99542 508 aa16.91■□□□□ 0.3
SQSTM1-205ENST00000464493 MYL10Q9BUA6 226 aa16.91■□□□□ 0.3
SQSTM1-205ENST00000464493 ZSWIM6Q9HCJ5 1215 aa16.91■□□□□ 0.3
SQSTM1-205ENST00000464493 VAT1LQ9HCJ6 419 aa16.91■□□□□ 0.3
SQSTM1-205ENST00000464493 FBXO40Q9UH90 709 aa16.91■□□□□ 0.3
SQSTM1-205ENST00000464493 CCPG1Q9ULG6 757 aa16.91■□□□□ 0.3
SQSTM1-205ENST00000464493 ZNFX1Q9P2E3 1918 aaKnown RBP16.9■□□□□ 0.3
SQSTM1-205ENST00000464493 CCDC85CA6NKD9 419 aa16.9■□□□□ 0.3
SQSTM1-205ENST00000464493 DHX16O60231 1041 aaKnown RBP16.9■□□□□ 0.3
SQSTM1-205ENST00000464493 CALM1P0DP23 149 aa16.9■□□□□ 0.3
SQSTM1-205ENST00000464493 CALM2P0DP24 149 aa16.9■□□□□ 0.3
SQSTM1-205ENST00000464493 CALM3P0DP25 149 aa16.9■□□□□ 0.3
SQSTM1-205ENST00000464493 ALAS1P13196 640 aa16.9■□□□□ 0.3
SQSTM1-205ENST00000464493 KIF5BP33176 963 aa16.9■□□□□ 0.3
SQSTM1-205ENST00000464493 KCTD2Q14681 263 aa16.9■□□□□ 0.3
SQSTM1-205ENST00000464493 Q6ZUG5 572 aa16.9■□□□□ 0.3
SQSTM1-205ENST00000464493 RUFY3Q7L099 469 aa16.9■□□□□ 0.3
SQSTM1-205ENST00000464493 CTCFLQ8NI51 663 aaPredicted RBP16.9■□□□□ 0.3
SQSTM1-205ENST00000464493 TRERF1Q96PN7 1200 aa16.9■□□□□ 0.3
SQSTM1-205ENST00000464493 TM6SF1Q9BZW5 370 aa16.9■□□□□ 0.3
SQSTM1-205ENST00000464493 JMJD4Q9H9V9 463 aa16.9■□□□□ 0.3
SQSTM1-205ENST00000464493 HOMER2Q9NSB8 354 aa16.9■□□□□ 0.3
SQSTM1-205ENST00000464493 SLC5A4Q9NY91 659 aa16.9■□□□□ 0.3
SQSTM1-205ENST00000464493 BIN2Q9UBW5 565 aaPredicted RBP16.9■□□□□ 0.3
SQSTM1-205ENST00000464493 PNMA2Q9UL42 364 aa16.9■□□□□ 0.3
SQSTM1-205ENST00000464493 COBLO75128 1261 aa16.89■□□□□ 0.29
SQSTM1-205ENST00000464493 HOXC6P09630 235 aa16.89■□□□□ 0.29
SQSTM1-205ENST00000464493 ANAPC15P60006 121 aa16.89■□□□□ 0.29
SQSTM1-205ENST00000464493 CDC37Q16543 378 aaPredicted RBP16.89■□□□□ 0.29
SQSTM1-205ENST00000464493 TRMT44Q8IYL2 757 aaKnown RBP16.89■□□□□ 0.29
SQSTM1-205ENST00000464493 FBXL16Q8N461 479 aa16.89■□□□□ 0.29
SQSTM1-205ENST00000464493 ZNF333Q96JL9 665 aa16.89■□□□□ 0.29
SQSTM1-205ENST00000464493 APBA2Q99767 749 aa16.89■□□□□ 0.29
SQSTM1-205ENST00000464493 ACAD9Q9H845 621 aa16.89■□□□□ 0.29
SQSTM1-205ENST00000464493 RNF146Q9NTX7 359 aa16.89■□□□□ 0.29
SQSTM1-205ENST00000464493 CYP46A1Q9Y6A2 500 aa16.89■□□□□ 0.29
SQSTM1-205ENST00000464493 SMCHD1A6NHR9 2005 aa16.89■□□□□ 0.29
SQSTM1-205ENST00000464493 RXRAP19793 462 aa16.88■□□□□ 0.29
SQSTM1-205ENST00000464493 GNAQP50148 359 aa16.88■□□□□ 0.29
SQSTM1-205ENST00000464493 UBXN2AP68543 259 aa16.88■□□□□ 0.29
SQSTM1-205ENST00000464493 APOA5Q6Q788 366 aa16.88■□□□□ 0.29
SQSTM1-205ENST00000464493 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.88■□□□□ 0.291e-6■■□□□ 14.4
SQSTM1-205ENST00000464493 ANKRD35Q8N283 1001 aa16.88■□□□□ 0.29
SQSTM1-205ENST00000464493 FANCBQ8NB91 859 aa16.88■□□□□ 0.29
SQSTM1-205ENST00000464493 NPLOC4Q8TAT6 608 aa16.88■□□□□ 0.29
SQSTM1-205ENST00000464493 DDX11Q96FC9 970 aa16.88■□□□□ 0.29
SQSTM1-205ENST00000464493 LZTS2Q9BRK4 669 aa16.88■□□□□ 0.29
SQSTM1-205ENST00000464493 RIOX1Q9H6W3 641 aa16.88■□□□□ 0.29
SQSTM1-205ENST00000464493 BRPF3Q9ULD4 1205 aa16.88■□□□□ 0.29
SQSTM1-205ENST00000464493 ZNF236Q9UL36 1845 aa16.88■□□□□ 0.29
SQSTM1-205ENST00000464493 KLF18A0A0U1RQI7 1052 aa16.87■□□□□ 0.29
SQSTM1-205ENST00000464493 ZBTB43O43298 467 aa16.87■□□□□ 0.29
SQSTM1-205ENST00000464493 HMGCRP04035 888 aa16.87■□□□□ 0.29
SQSTM1-205ENST00000464493 INHAP05111 366 aa16.87■□□□□ 0.29
SQSTM1-205ENST00000464493 PGK2P07205 417 aa16.87■□□□□ 0.29
SQSTM1-205ENST00000464493 CCL14Q16627 93 aa16.87■□□□□ 0.29
SQSTM1-205ENST00000464493 QRICH1Q2TAL8 776 aa16.87■□□□□ 0.29
SQSTM1-205ENST00000464493 MICU3Q86XE3 530 aa16.87■□□□□ 0.29
SQSTM1-205ENST00000464493 RAB11FIP4Q86YS3 637 aa16.87■□□□□ 0.29
SQSTM1-205ENST00000464493 CCDC144CPQ8IYA2 1237 aa16.87■□□□□ 0.29
SQSTM1-205ENST00000464493 TRIB2Q92519 343 aa16.87■□□□□ 0.29
SQSTM1-205ENST00000464493 BRF1Q92994 677 aa16.87■□□□□ 0.29
SQSTM1-205ENST00000464493 MTMR8Q96EF0 704 aa16.87■□□□□ 0.29
SQSTM1-205ENST00000464493 AGXT2Q9BYV1 514 aa16.87■□□□□ 0.29
SQSTM1-205ENST00000464493 UPF3BQ9BZI7 483 aaKnown RBP16.87■□□□□ 0.29
SQSTM1-205ENST00000464493 BAZ2BQ9UIF8 2168 aaKnown RBP16.87■□□□□ 0.29
SQSTM1-205ENST00000464493 CYTH3O43739 400 aa16.86■□□□□ 0.29
SQSTM1-205ENST00000464493 MYCP01106 439 aaPredicted RBP16.86■□□□□ 0.29
SQSTM1-205ENST00000464493 TAL1P17542 331 aaPredicted RBP16.86■□□□□ 0.29
SQSTM1-205ENST00000464493 SMARCA1P28370 1054 aa16.86■□□□□ 0.29
SQSTM1-205ENST00000464493 APOBRQ0VD83 1088 aa16.86■□□□□ 0.29
SQSTM1-205ENST00000464493 SLC35G1Q2M3R5 365 aa16.86■□□□□ 0.29
SQSTM1-205ENST00000464493 USH1GQ495M9 461 aa16.86■□□□□ 0.29
SQSTM1-205ENST00000464493 MUM1L1Q5H9M0 696 aa16.86■□□□□ 0.29
SQSTM1-205ENST00000464493 FBXO11Q86XK2 927 aa16.86■□□□□ 0.29
SQSTM1-205ENST00000464493 FLRT1Q9NZU1 646 aa16.86■□□□□ 0.29
SQSTM1-205ENST00000464493 NAP1L2Q9ULW6 460 aaPredicted RBP16.86■□□□□ 0.29
SQSTM1-205ENST00000464493 DIS3Q9Y2L1 958 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms