RNA–Protein interactions for RNA: ENST00000462322.2

SMKR1-201, Transcript of small lysine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMKR1, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-201ENST00000462322 TNKSO95271 1327 aa28.14■■■□□ 2.09
SMKR1-201ENST00000462322 ZNF543Q08ER8 600 aa28.13■■■□□ 2.09
SMKR1-201ENST00000462322 ENAHQ8N8S7 591 aaPredicted RBP28.13■■■□□ 2.09
SMKR1-201ENST00000462322 PNMA1Q8ND90 353 aa28.13■■■□□ 2.09
SMKR1-201ENST00000462322 DIS3LQ8TF46 1054 aaKnown RBP28.13■■■□□ 2.09
SMKR1-201ENST00000462322 ANKS1AQ92625 1134 aa28.13■■■□□ 2.09
SMKR1-201ENST00000462322 SNHG28P0DPA3 235 aa28.12■■■□□ 2.09
SMKR1-201ENST00000462322 TKFCQ3LXA3 575 aa28.12■■■□□ 2.09
SMKR1-201ENST00000462322 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.12■■■□□ 2.09
SMKR1-201ENST00000462322 NECAB2Q7Z6G3 386 aa28.12■■■□□ 2.09
SMKR1-201ENST00000462322 DPF3Q92784 378 aa28.12■■■□□ 2.09
SMKR1-201ENST00000462322 ESYT1Q9BSJ8 1104 aa28.12■■■□□ 2.09
SMKR1-201ENST00000462322 ACAD9Q9H845 621 aa28.12■■■□□ 2.09
SMKR1-201ENST00000462322 RNF146Q9NTX7 359 aa28.12■■■□□ 2.09
SMKR1-201ENST00000462322 DDX20Q9UHI6 824 aaKnown RBP28.12■■■□□ 2.09
SMKR1-201ENST00000462322 MSCO60682 206 aa28.11■■■□□ 2.09
SMKR1-201ENST00000462322 ALAS1P13196 640 aa28.11■■■□□ 2.09
SMKR1-201ENST00000462322 PRAMEF19Q5SWL8 479 aa28.11■■■□□ 2.09
SMKR1-201ENST00000462322 TINF2Q9BSI4 451 aa28.11■■■□□ 2.09
SMKR1-201ENST00000462322 RANBP17Q9H2T7 1088 aaKnown RBP28.11■■■□□ 2.09
SMKR1-201ENST00000462322 RBM8AQ9Y5S9 174 aaKnown RBP28.11■■■□□ 2.09
SMKR1-201ENST00000462322 PLXNA1Q9UIW2 1896 aa28.1■■■□□ 2.09
SMKR1-201ENST00000462322 GPATCH4Q5T3I0 446 aaKnown RBP28.1■■■□□ 2.09
SMKR1-201ENST00000462322 CYB5R4Q7L1T6 521 aa28.1■■■□□ 2.09
SMKR1-201ENST00000462322 TRERF1Q96PN7 1200 aa28.1■■■□□ 2.09
SMKR1-201ENST00000462322 CCPG1Q9ULG6 757 aa28.1■■■□□ 2.09
SMKR1-201ENST00000462322 DNAJC25-GNG10A0A024R161 153 aa28.09■■■□□ 2.09
SMKR1-201ENST00000462322 GOLGA8HP0CJ92 632 aa28.09■■■□□ 2.09
SMKR1-201ENST00000462322 IFIT1BQ5T764 474 aaKnown RBP28.09■■■□□ 2.09
SMKR1-201ENST00000462322 RALYLQ86SE5 291 aaKnown RBP28.09■■■□□ 2.09
SMKR1-201ENST00000462322 TAF6LQ9Y6J9 622 aa28.09■■■□□ 2.09
SMKR1-201ENST00000462322 E7EWF7 191 aa28.08■■■□□ 2.09
SMKR1-201ENST00000462322 ICAM1P05362 532 aa28.08■■■□□ 2.09
SMKR1-201ENST00000462322 MNX1P50219 401 aaPredicted RBP28.08■■■□□ 2.09
SMKR1-201ENST00000462322 LSG1Q9H089 658 aaKnown RBP28.08■■■□□ 2.09
SMKR1-201ENST00000462322 NRBP1Q9UHY1 535 aa28.08■■■□□ 2.09
SMKR1-201ENST00000462322 CEP290O15078 2479 aa28.07■■■□□ 2.08
SMKR1-201ENST00000462322 SEPT4O43236 478 aa28.07■■■□□ 2.08
SMKR1-201ENST00000462322 NCOA7Q8NI08 942 aa28.07■■■□□ 2.08
SMKR1-201ENST00000462322 C11orf49Q9H6J7 331 aa28.07■■■□□ 2.08
SMKR1-201ENST00000462322 SEC23AQ15436 765 aa28.06■■■□□ 2.08
SMKR1-201ENST00000462322 STOX1Q6ZVD7 989 aa28.06■■■□□ 2.08
SMKR1-201ENST00000462322 MSL3Q8N5Y2 521 aaKnown RBP28.06■■■□□ 2.08
SMKR1-201ENST00000462322 ANO2Q9NQ90 1003 aa28.06■■■□□ 2.08
SMKR1-201ENST00000462322 A1CFQ9NQ94 594 aaKnown RBP28.06■■■□□ 2.08
SMKR1-201ENST00000462322 CNPY2Q9Y2B0 182 aa28.06■■■□□ 2.08
SMKR1-201ENST00000462322 POTEB2H3BUK9 544 aa28.05■■■□□ 2.08
SMKR1-201ENST00000462322 TAL1P17542 331 aaPredicted RBP28.05■■■□□ 2.08
SMKR1-201ENST00000462322 MUM1L1Q5H9M0 696 aa28.05■■■□□ 2.08
SMKR1-201ENST00000462322 ANO1Q5XXA6 986 aa28.05■■■□□ 2.08
SMKR1-201ENST00000462322 CASC1Q6TDU7 716 aa28.05■■■□□ 2.08
SMKR1-201ENST00000462322 ZNF467Q7Z7K2 595 aaPredicted RBP28.05■■■□□ 2.08
SMKR1-201ENST00000462322 UBA5Q9GZZ9 404 aa28.05■■■□□ 2.08
SMKR1-201ENST00000462322 PFASO15067 1338 aa28.04■■■□□ 2.08
SMKR1-201ENST00000462322 SYNGAP1Q96PV0 1343 aa28.04■■■□□ 2.08
SMKR1-201ENST00000462322 IFIT3O14879 490 aaKnown RBP28.04■■■□□ 2.08
SMKR1-201ENST00000462322 ASPRV1Q53RT3 343 aa28.04■■■□□ 2.08
SMKR1-201ENST00000462322 MAMDC4Q6UXC1 1216 aa28.04■■■□□ 2.08
SMKR1-201ENST00000462322 CPVLQ9H3G5 476 aa28.04■■■□□ 2.08
SMKR1-201ENST00000462322 ERICH2A1L162 156 aa28.03■■■□□ 2.08
SMKR1-201ENST00000462322 CDC45O75419 566 aa28.03■■■□□ 2.08
SMKR1-201ENST00000462322 PARP1P09874 1014 aaKnown RBP28.03■■■□□ 2.08
SMKR1-201ENST00000462322 CNTN2Q02246 1040 aa28.03■■■□□ 2.08
SMKR1-201ENST00000462322 PNMA2Q9UL42 364 aa28.03■■■□□ 2.08
SMKR1-201ENST00000462322 FRMPD3Q5JV73 1810 aa28.03■■■□□ 2.08
SMKR1-201ENST00000462322 CENPBP07199 599 aaPredicted RBP28.02■■■□□ 2.08
SMKR1-201ENST00000462322 SART3Q15020 963 aaKnown RBP28.02■■■□□ 2.08
SMKR1-201ENST00000462322 NSMFQ6X4W1 530 aa28.02■■■□□ 2.08
SMKR1-201ENST00000462322 FAM133AQ8N9E0 248 aa28.02■■■□□ 2.08
SMKR1-201ENST00000462322 FGD4Q96M96 766 aa28.02■■■□□ 2.08
SMKR1-201ENST00000462322 SMCHD1A6NHR9 2005 aa28.01■■■□□ 2.07
SMKR1-201ENST00000462322 H0YGN5 161 aa28.01■■■□□ 2.07
SMKR1-201ENST00000462322 EVI5O60447 810 aa28.01■■■□□ 2.07
SMKR1-201ENST00000462322 SNAI1O95863 264 aaPredicted RBP28.01■■■□□ 2.07
SMKR1-201ENST00000462322 ZNF865P0CJ78 1059 aaPredicted RBP28.01■■■□□ 2.07
SMKR1-201ENST00000462322 CHST3Q7LGC8 479 aa28.01■■■□□ 2.07
SMKR1-201ENST00000462322 ARRDC4Q8NCT1 418 aa28.01■■■□□ 2.07
SMKR1-201ENST00000462322 CYP39A1Q9NYL5 469 aa28.01■■■□□ 2.07
SMKR1-201ENST00000462322 NR2E3Q9Y5X4 410 aa28.01■■■□□ 2.07
SMKR1-201ENST00000462322 SLC27A2O14975 620 aa28■■■□□ 2.07
SMKR1-201ENST00000462322 WTAPQ15007 396 aa28■■■□□ 2.07
SMKR1-201ENST00000462322 MB21D2Q8IYB1 491 aaPredicted RBP28■■■□□ 2.07
SMKR1-201ENST00000462322 CDKN2AIPQ9NXV6 580 aaPredicted RBP28■■■□□ 2.07
SMKR1-201ENST00000462322 ZHX1Q9UKY1 873 aaPredicted RBP28■■■□□ 2.07
SMKR1-201ENST00000462322 WDR19Q8NEZ3 1342 aa27.99■■■□□ 2.07
SMKR1-201ENST00000462322 DHX16O60231 1041 aaKnown RBP27.99■■■□□ 2.07
SMKR1-201ENST00000462322 MYCNP04198 464 aaPredicted RBP27.99■■■□□ 2.07
SMKR1-201ENST00000462322 RARBP10826 455 aa27.99■■■□□ 2.07
SMKR1-201ENST00000462322 COL6A1P12109 1028 aa27.99■■■□□ 2.07
SMKR1-201ENST00000462322 CREB3L3Q68CJ9 461 aa27.99■■■□□ 2.07
SMKR1-201ENST00000462322 ARMCX2Q7L311 632 aa27.99■■■□□ 2.07
SMKR1-201ENST00000462322 ADGRF4Q8IZF3 695 aa27.99■■■□□ 2.07
SMKR1-201ENST00000462322 SOWAHBA6NEL2 793 aa27.98■■■□□ 2.07
SMKR1-201ENST00000462322 DNM1LO00429 736 aa27.98■■■□□ 2.07
SMKR1-201ENST00000462322 NFIBO00712 420 aa27.98■■■□□ 2.07
SMKR1-201ENST00000462322 AKR1A1P14550 325 aa27.98■■■□□ 2.07
SMKR1-201ENST00000462322 ANTXR2P58335 489 aa27.98■■■□□ 2.07
SMKR1-201ENST00000462322 NECTIN1Q15223 517 aa27.98■■■□□ 2.07
SMKR1-201ENST00000462322 CDC37Q16543 378 aaPredicted RBP27.98■■■□□ 2.07
SMKR1-201ENST00000462322 TMEM67Q5HYA8 995 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms