RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 CYP2D6P10635 497 aa13.16□□□□□ -0.3
PDZRN3-203ENST00000462146 CAGE1Q8TC20 777 aa13.16□□□□□ -0.3
PDZRN3-203ENST00000462146 COG1Q8WTW3 980 aa13.16□□□□□ -0.3
PDZRN3-203ENST00000462146 SELENOOQ9BVL4 669 aa13.16□□□□□ -0.3
PDZRN3-203ENST00000462146 TMEM60Q9H2L4 133 aa13.16□□□□□ -0.3
PDZRN3-203ENST00000462146 ACBD3Q9H3P7 528 aa13.16□□□□□ -0.3
PDZRN3-203ENST00000462146 RABEP2Q9H5N1 569 aa13.16□□□□□ -0.3
PDZRN3-203ENST00000462146 RMND1Q9NWS8 449 aa13.16□□□□□ -0.3
PDZRN3-203ENST00000462146 PLEKP08567 350 aaPredicted RBP13.15□□□□□ -0.3
PDZRN3-203ENST00000462146 IGHMBP2P38935 993 aaKnown RBP13.15□□□□□ -0.3
PDZRN3-203ENST00000462146 NOP2P46087 812 aaKnown RBP13.15□□□□□ -0.3
PDZRN3-203ENST00000462146 STIM1Q13586 685 aa13.15□□□□□ -0.3
PDZRN3-203ENST00000462146 TYW1BQ6NUM6 668 aa13.15□□□□□ -0.3
PDZRN3-203ENST00000462146 RASSF8Q8NHQ8 419 aa13.15□□□□□ -0.3
PDZRN3-203ENST00000462146 CTCFLQ8NI51 663 aaPredicted RBP13.15□□□□□ -0.3
PDZRN3-203ENST00000462146 TTYH3Q9C0H2 523 aa13.15□□□□□ -0.3
PDZRN3-203ENST00000462146 EHD4Q9H223 541 aa13.15□□□□□ -0.3
PDZRN3-203ENST00000462146 COL22A1Q8NFW1 1626 aaPredicted RBP13.15□□□□□ -0.3
PDZRN3-203ENST00000462146 KRT26Q7Z3Y9 468 aa13.15□□□□□ -0.3
PDZRN3-203ENST00000462146 HDAC7Q8WUI4 952 aa13.15□□□□□ -0.3
PDZRN3-203ENST00000462146 RRP36Q96EU6 259 aaKnown RBP13.15□□□□□ -0.3
PDZRN3-203ENST00000462146 VIPAS39Q9H9C1 493 aa13.15□□□□□ -0.3
PDZRN3-203ENST00000462146 NHEJ1Q9H9Q4 299 aaPredicted RBP13.15□□□□□ -0.3
PDZRN3-203ENST00000462146 LAMB1P07942 1786 aa13.14□□□□□ -0.31
PDZRN3-203ENST00000462146 BCL9O00512 1426 aa13.14□□□□□ -0.31
PDZRN3-203ENST00000462146 ERVV-1B6SEH8 477 aa13.14□□□□□ -0.31
PDZRN3-203ENST00000462146 ZNF263O14978 683 aa13.14□□□□□ -0.31
PDZRN3-203ENST00000462146 DDAH1O94760 285 aa13.14□□□□□ -0.31
PDZRN3-203ENST00000462146 IDEP14735 1019 aa13.14□□□□□ -0.31
PDZRN3-203ENST00000462146 EIF5P55010 431 aaKnown RBP13.14□□□□□ -0.31
PDZRN3-203ENST00000462146 PFKFB3Q16875 520 aaPredicted RBP13.14□□□□□ -0.31
PDZRN3-203ENST00000462146 DRC1Q96MC2 740 aa13.14□□□□□ -0.31
PDZRN3-203ENST00000462146 DUSP9Q99956 384 aaKnown RBP13.14□□□□□ -0.31
PDZRN3-203ENST00000462146 JADE2Q9NQC1 790 aa13.14□□□□□ -0.31
PDZRN3-203ENST00000462146 SMARCAL1Q9NZC9 954 aa13.14□□□□□ -0.31
PDZRN3-203ENST00000462146 A0A1W2PQC6 194 aa13.14□□□□□ -0.31
PDZRN3-203ENST00000462146 TUBBP07437 444 aa13.14□□□□□ -0.31
PDZRN3-203ENST00000462146 TRIM21P19474 475 aaKnown RBP13.14□□□□□ -0.31
PDZRN3-203ENST00000462146 TTI2Q6NXR4 508 aa13.14□□□□□ -0.31
PDZRN3-203ENST00000462146 TUBGCP2Q9BSJ2 902 aa13.14□□□□□ -0.31
PDZRN3-203ENST00000462146 EHD2Q9NZN4 543 aa13.14□□□□□ -0.31
PDZRN3-203ENST00000462146 CASZ1Q86V15 1759 aa13.13□□□□□ -0.31
PDZRN3-203ENST00000462146 CALM1P0DP23 149 aa13.13□□□□□ -0.31
PDZRN3-203ENST00000462146 CALM2P0DP24 149 aa13.13□□□□□ -0.31
PDZRN3-203ENST00000462146 CALM3P0DP25 149 aa13.13□□□□□ -0.31
PDZRN3-203ENST00000462146 LONP1P36776 959 aaKnown RBP13.13□□□□□ -0.31
PDZRN3-203ENST00000462146 MEA1Q16626 185 aa13.13□□□□□ -0.31
PDZRN3-203ENST00000462146 CERS3Q8IU89 383 aa13.13□□□□□ -0.31
PDZRN3-203ENST00000462146 GOLGA6L1Q8N7Z2 621 aa13.13□□□□□ -0.31
PDZRN3-203ENST00000462146 MKRN1Q9UHC7 482 aaKnown RBP13.13□□□□□ -0.31
PDZRN3-203ENST00000462146 KRT86O43790 486 aa13.13□□□□□ -0.31
PDZRN3-203ENST00000462146 SRGNP10124 158 aa13.13□□□□□ -0.31
PDZRN3-203ENST00000462146 IL6STP40189 918 aaPredicted RBP13.13□□□□□ -0.31
PDZRN3-203ENST00000462146 TSR1Q2NL82 804 aaKnown RBP13.13□□□□□ -0.31
PDZRN3-203ENST00000462146 CCDC152Q4G0S7 254 aa13.13□□□□□ -0.31
PDZRN3-203ENST00000462146 CCNI2Q6ZMN8 369 aaPredicted RBP13.13□□□□□ -0.31
PDZRN3-203ENST00000462146 BLIDQ8IZY5 108 aa13.13□□□□□ -0.31
PDZRN3-203ENST00000462146 STAG2Q8N3U4 1231 aa13.13□□□□□ -0.31
PDZRN3-203ENST00000462146 SMARCC1Q92922 1105 aaPredicted RBP13.13□□□□□ -0.31
PDZRN3-203ENST00000462146 HPS3Q969F9 1004 aa13.13□□□□□ -0.31
PDZRN3-203ENST00000462146 PSMB7Q99436 277 aa13.13□□□□□ -0.31
PDZRN3-203ENST00000462146 EXOC1Q9NV70 894 aa13.13□□□□□ -0.31
PDZRN3-203ENST00000462146 LRWD1Q9UFC0 647 aa13.13□□□□□ -0.31
PDZRN3-203ENST00000462146 MTMR7Q9Y216 660 aa13.13□□□□□ -0.31
PDZRN3-203ENST00000462146 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.13□□□□□ -0.31
PDZRN3-203ENST00000462146 CAPN6Q9Y6Q1 641 aa13.13□□□□□ -0.31
PDZRN3-203ENST00000462146 A0A0G2JS52 829 aa13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 EEF1GP26641 437 aaKnown RBP13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 MAGEA9P43362 315 aa13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 TRAPPC10P48553 1259 aa13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 MAP9Q49MG5 647 aa13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 FKBP15Q5T1M5 1219 aa13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 CSGALNACT2Q8N6G5 542 aa13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 PCMTD1Q96MG8 357 aaPredicted RBP13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 BRIP1Q9BX63 1249 aa13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 THAP9Q9H5L6 903 aa13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 KAT14Q9H8E8 782 aa13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 MLXIPQ9HAP2 919 aa13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 SLAIN2Q9P270 581 aa13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 SCN7AQ01118 1682 aa13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 TARSL2A2RTX5 802 aaKnown RBP13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 PPFIA4O75335 1185 aa13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 FGRP09769 529 aa13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 CORO7P57737 925 aa13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 KRT83P78385 493 aa13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 INF2Q27J81 1249 aa13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 C3orf67Q6ZVT6 689 aa13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 CRACR2AQ9BSW2 395 aa13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 MAGEC2Q9UBF1 373 aaPredicted RBP13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 ZNF804BA4D1E1 1349 aa13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 FCER1AP12319 257 aa13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 KLRK1P26718 216 aa13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 CYLC1P35663 651 aaPredicted RBP13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 MATR3P43243 847 aaKnown RBP eCLIP13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 DNM2P50570 870 aa13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 SLC7A5Q01650 507 aa13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 CKAP4Q07065 602 aaKnown RBP13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 TBC1D8BQ0IIM8 1120 aa13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 ARL6IP4Q66PJ3 421 aaKnown RBP13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 ANKRD40Q6AI12 368 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms