RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 MYH4Q9Y623 1939 aa22.3■■□□□ 1.16
MSH6-206ENST00000455383 ARVCFO00192 962 aa22.3■■□□□ 1.16
MSH6-206ENST00000455383 GPAA1O43292 621 aa22.3■■□□□ 1.16
MSH6-206ENST00000455383 C6orf222P0C671 652 aaPredicted RBP22.3■■□□□ 1.16
MSH6-206ENST00000455383 GNAT2P19087 354 aa22.3■■□□□ 1.16
MSH6-206ENST00000455383 ARMCX2Q7L311 632 aa22.3■■□□□ 1.16
MSH6-206ENST00000455383 ZNF444Q8N0Y2 327 aaPredicted RBP22.3■■□□□ 1.16
MSH6-206ENST00000455383 ANKRD35Q8N283 1001 aa22.3■■□□□ 1.16
MSH6-206ENST00000455383 ZNF287Q9HBT7 754 aa22.3■■□□□ 1.16
MSH6-206ENST00000455383 TTLL1O95922 423 aa22.29■■□□□ 1.16
MSH6-206ENST00000455383 ZFYP08048 801 aaPredicted RBP22.29■■□□□ 1.16
MSH6-206ENST00000455383 FDX1P10109 184 aa22.29■■□□□ 1.16
MSH6-206ENST00000455383 SLC4A3P48751 1232 aa22.29■■□□□ 1.16
MSH6-206ENST00000455383 PPIGQ13427 754 aaKnown RBP eCLIP22.29■■□□□ 1.16
MSH6-206ENST00000455383 TMEM240Q5SV17 173 aa22.29■■□□□ 1.16
MSH6-206ENST00000455383 SPC25Q9HBM1 224 aa22.29■■□□□ 1.16
MSH6-206ENST00000455383 CTDP1Q9Y5B0 961 aaPredicted RBP22.29■■□□□ 1.16
MSH6-206ENST00000455383 A0A0U1RQG5 324 aaPredicted RBP22.28■■□□□ 1.16
MSH6-206ENST00000455383 M0R2C6 588 aa22.28■■□□□ 1.16
MSH6-206ENST00000455383 PRDM1O75626 825 aa22.28■■□□□ 1.16
MSH6-206ENST00000455383 FAM126BQ8IXS8 530 aa22.28■■□□□ 1.16
MSH6-206ENST00000455383 LRRC47Q8N1G4 583 aaKnown RBP22.28■■□□□ 1.16
MSH6-206ENST00000455383 FAM133AQ8N9E0 248 aa22.28■■□□□ 1.16
MSH6-206ENST00000455383 NEDD1Q8NHV4 660 aa22.28■■□□□ 1.16
MSH6-206ENST00000455383 TIFAQ96CG3 184 aa22.28■■□□□ 1.16
MSH6-206ENST00000455383 ZNF576Q9H609 170 aa22.28■■□□□ 1.16
MSH6-206ENST00000455383 DCTPP1Q9H773 170 aa22.28■■□□□ 1.16
MSH6-206ENST00000455383 MCM3APO60318 1980 aa22.28■■□□□ 1.16
MSH6-206ENST00000455383 PATL2C9JE40 543 aaKnown RBP22.27■■□□□ 1.16
MSH6-206ENST00000455383 BMP3P12645 472 aa22.27■■□□□ 1.16
MSH6-206ENST00000455383 TDO2P48775 406 aa22.27■■□□□ 1.16
MSH6-206ENST00000455383 GNASQ5JWF2 1037 aa22.27■■□□□ 1.16
MSH6-206ENST00000455383 C20orf194Q5TEA3 1177 aa22.27■■□□□ 1.16
MSH6-206ENST00000455383 SLFN13Q68D06 897 aa22.27■■□□□ 1.16
MSH6-206ENST00000455383 CCDC144CPQ8IYA2 1237 aa22.27■■□□□ 1.16
MSH6-206ENST00000455383 IFNL3Q8IZI9 196 aa22.27■■□□□ 1.16
MSH6-206ENST00000455383 USP38Q8NB14 1042 aa22.27■■□□□ 1.16
MSH6-206ENST00000455383 RCAN3Q9UKA8 241 aa22.27■■□□□ 1.16
MSH6-206ENST00000455383 CD4P01730 458 aa22.26■■□□□ 1.15
MSH6-206ENST00000455383 CCDC174Q6PII3 467 aa22.26■■□□□ 1.15
MSH6-206ENST00000455383 SLC43A3Q8NBI5 491 aa22.26■■□□□ 1.15
MSH6-206ENST00000455383 SYMPKQ92797 1274 aaKnown RBP22.26■■□□□ 1.15
MSH6-206ENST00000455383 ZNF536O15090 1300 aa22.26■■□□□ 1.15
MSH6-206ENST00000455383 CSF2RAP15509 400 aa22.25■■□□□ 1.15
MSH6-206ENST00000455383 CNTN2Q02246 1040 aa22.25■■□□□ 1.15
MSH6-206ENST00000455383 TSHZ3Q63HK5 1081 aa22.25■■□□□ 1.15
MSH6-206ENST00000455383 TMEM199Q8N511 208 aa22.25■■□□□ 1.15
MSH6-206ENST00000455383 GPATCH3Q96I76 525 aa22.25■■□□□ 1.15
MSH6-206ENST00000455383 PBX4Q9BYU1 374 aa22.25■■□□□ 1.15
MSH6-206ENST00000455383 ACAD9Q9H845 621 aa22.25■■□□□ 1.15
MSH6-206ENST00000455383 GNEQ9Y223 722 aaKnown RBP22.25■■□□□ 1.15
MSH6-206ENST00000455383 ASTN1O14525 1302 aa22.25■■□□□ 1.15
MSH6-206ENST00000455383 SOWAHBA6NEL2 793 aa22.24■■□□□ 1.15
MSH6-206ENST00000455383 VTI1AQ96AJ9 217 aa22.24■■□□□ 1.15
MSH6-206ENST00000455383 GMCL1Q96IK5 515 aa22.24■■□□□ 1.15
MSH6-206ENST00000455383 A1CFQ9NQ94 594 aaKnown RBP22.24■■□□□ 1.15
MSH6-206ENST00000455383 PRDM6Q9NQX0 595 aa22.24■■□□□ 1.15
MSH6-206ENST00000455383 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.23■■□□□ 1.15
MSH6-206ENST00000455383 GRXCR1A8MXD5 290 aa22.23■■□□□ 1.15
MSH6-206ENST00000455383 TMEM232C9JQI7 657 aa22.23■■□□□ 1.15
MSH6-206ENST00000455383 TLR3O15455 904 aaKnown RBP22.23■■□□□ 1.15
MSH6-206ENST00000455383 PLA2G6O60733 806 aa22.23■■□□□ 1.15
MSH6-206ENST00000455383 APPP05067 770 aa22.23■■□□□ 1.15
MSH6-206ENST00000455383 TSPY3P0CV98 308 aa22.23■■□□□ 1.15
MSH6-206ENST00000455383 TSPY8P0CW00 308 aa22.23■■□□□ 1.15
MSH6-206ENST00000455383 PBX2P40425 430 aa22.23■■□□□ 1.15
MSH6-206ENST00000455383 STAT2P52630 851 aa22.23■■□□□ 1.15
MSH6-206ENST00000455383 TKFCQ3LXA3 575 aa22.23■■□□□ 1.15
MSH6-206ENST00000455383 PSRC1Q6PGN9 363 aaPredicted RBP22.23■■□□□ 1.15
MSH6-206ENST00000455383 ZNF365Q70YC5 407 aa22.23■■□□□ 1.15
MSH6-206ENST00000455383 FAM160B2Q86V87 743 aa22.23■■□□□ 1.15
MSH6-206ENST00000455383 STAG1Q8WVM7 1258 aa22.23■■□□□ 1.15
MSH6-206ENST00000455383 HOMER2Q9NSB8 354 aa22.23■■□□□ 1.15
MSH6-206ENST00000455383 TTC28Q96AY4 2481 aa22.23■■□□□ 1.15
MSH6-206ENST00000455383 BEX3Q00994 111 aa22.22■■□□□ 1.15
MSH6-206ENST00000455383 TFAP4Q01664 338 aa22.22■■□□□ 1.15
MSH6-206ENST00000455383 TNFAIP2Q03169 654 aa22.22■■□□□ 1.15
MSH6-206ENST00000455383 PDE4BQ07343 736 aa22.22■■□□□ 1.15
MSH6-206ENST00000455383 TJAP1Q5JTD0 557 aa22.22■■□□□ 1.15
MSH6-206ENST00000455383 DIEXFQ68CQ4 756 aaKnown RBP22.22■■□□□ 1.15
MSH6-206ENST00000455383 CHURC1Q8WUH1 139 aa22.22■■□□□ 1.15
MSH6-206ENST00000455383 HERVK_113Q902F9 699 aa22.22■■□□□ 1.15
MSH6-206ENST00000455383 AGBL1Q96MI9 1066 aa22.22■■□□□ 1.15
MSH6-206ENST00000455383 PPP1R12CQ9BZL4 782 aa22.22■■□□□ 1.15
MSH6-206ENST00000455383 IL23AQ9NPF7 189 aa22.22■■□□□ 1.15
MSH6-206ENST00000455383 RNF146Q9NTX7 359 aa22.22■■□□□ 1.15
MSH6-206ENST00000455383 ASB14A6NK59 587 aa22.21■■□□□ 1.15
MSH6-206ENST00000455383 CABYRO75952 493 aa22.21■■□□□ 1.15
MSH6-206ENST00000455383 ACRP10323 421 aa22.21■■□□□ 1.15
MSH6-206ENST00000455383 PPARAQ07869 468 aa22.21■■□□□ 1.15
MSH6-206ENST00000455383 LRRFIP1Q32MZ4 808 aaKnown RBP22.21■■□□□ 1.15
MSH6-206ENST00000455383 CCDC129Q6ZRS4 1044 aa22.21■■□□□ 1.15
MSH6-206ENST00000455383 SEC62Q99442 399 aaKnown RBP22.21■■□□□ 1.15
MSH6-206ENST00000455383 NACAP1Q9BZK3 213 aa22.21■■□□□ 1.15
MSH6-206ENST00000455383 LRRC37A2A6NM11 1700 aa22.2■■□□□ 1.14
MSH6-206ENST00000455383 CYP2C18P33260 490 aa22.2■■□□□ 1.14
MSH6-206ENST00000455383 AKNAD1Q5T1N1 836 aa22.2■■□□□ 1.14
MSH6-206ENST00000455383 CXCL17Q6UXB2 119 aa22.2■■□□□ 1.14
MSH6-206ENST00000455383 SEZ6LQ9BYH1 1024 aa22.2■■□□□ 1.14
MSH6-206ENST00000455383 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms