RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 VTI1AQ96AJ9 217 aa20.7■□□□□ 0.9
UBE2D4-209ENST00000454428 ABHD16BQ9H3Z7 469 aa20.7■□□□□ 0.9
UBE2D4-209ENST00000454428 SLC28A3Q9HAS3 691 aa20.7■□□□□ 0.9
UBE2D4-209ENST00000454428 APBB1O00213 710 aa20.69■□□□□ 0.9
UBE2D4-209ENST00000454428 FGBP02675 491 aa20.69■□□□□ 0.9
UBE2D4-209ENST00000454428 MYOGP15173 224 aa20.69■□□□□ 0.9
UBE2D4-209ENST00000454428 BEX3Q00994 111 aa20.69■□□□□ 0.9
UBE2D4-209ENST00000454428 CTR9Q6PD62 1173 aa20.69■□□□□ 0.9
UBE2D4-209ENST00000454428 ARMCX2Q7L311 632 aa20.69■□□□□ 0.9
UBE2D4-209ENST00000454428 OTOP2Q7RTS6 562 aa20.69■□□□□ 0.9
UBE2D4-209ENST00000454428 GRIN2DO15399 1336 aa20.69■□□□□ 0.9
UBE2D4-209ENST00000454428 PRRC2BQ5JSZ5 2229 aaKnown RBP20.69■□□□□ 0.9
UBE2D4-209ENST00000454428 MYH7P12883 1935 aa20.68■□□□□ 0.9
UBE2D4-209ENST00000454428 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.68■□□□□ 0.9
UBE2D4-209ENST00000454428 TLR3O15455 904 aaKnown RBP20.68■□□□□ 0.9
UBE2D4-209ENST00000454428 PTGS1P23219 599 aa20.68■□□□□ 0.9
UBE2D4-209ENST00000454428 KCNQ1P51787 676 aa20.68■□□□□ 0.9
UBE2D4-209ENST00000454428 WNT8AQ9H1J5 351 aa20.68■□□□□ 0.9
UBE2D4-209ENST00000454428 LRRC37A2A6NM11 1700 aa20.67■□□□□ 0.9
UBE2D4-209ENST00000454428 NDUFB10O96000 172 aa20.67■□□□□ 0.9
UBE2D4-209ENST00000454428 CXCL17Q6UXB2 119 aa20.67■□□□□ 0.9
UBE2D4-209ENST00000454428 CCDC144CPQ8IYA2 1237 aa20.67■□□□□ 0.9
UBE2D4-209ENST00000454428 CPXCR1Q8N123 301 aa20.67■□□□□ 0.9
UBE2D4-209ENST00000454428 IL27Q8NEV9 243 aa20.67■□□□□ 0.9
UBE2D4-209ENST00000454428 HIPK3Q9H422 1215 aa20.67■□□□□ 0.9
UBE2D4-209ENST00000454428 SPC25Q9HBM1 224 aa20.67■□□□□ 0.9
UBE2D4-209ENST00000454428 RAVER2Q9HCJ3 691 aaKnown RBP20.67■□□□□ 0.9
UBE2D4-209ENST00000454428 MYH4Q9Y623 1939 aa20.66■□□□□ 0.9
UBE2D4-209ENST00000454428 F5H6K3 240 aa20.66■□□□□ 0.9
UBE2D4-209ENST00000454428 SLC4A3P48751 1232 aa20.66■□□□□ 0.9
UBE2D4-209ENST00000454428 CCL23P55773 120 aa20.66■□□□□ 0.9
UBE2D4-209ENST00000454428 KLRC3Q07444 240 aa20.66■□□□□ 0.9
UBE2D4-209ENST00000454428 PRPF38AQ8NAV1 312 aaKnown RBP20.66■□□□□ 0.9
UBE2D4-209ENST00000454428 NOC4LQ9BVI4 516 aaKnown RBP20.66■□□□□ 0.9
UBE2D4-209ENST00000454428 C1QTNF1Q9BXJ1 281 aa20.66■□□□□ 0.9
UBE2D4-209ENST00000454428 SLC38A10Q9HBR0 1119 aa20.66■□□□□ 0.9
UBE2D4-209ENST00000454428 PAG1Q9NWQ8 432 aa20.66■□□□□ 0.9
UBE2D4-209ENST00000454428 RASA1P20936 1047 aa20.65■□□□□ 0.9
UBE2D4-209ENST00000454428 PPP2R2DQ66LE6 453 aa20.65■□□□□ 0.9
UBE2D4-209ENST00000454428 FTSJ3Q8IY81 847 aaKnown RBP20.65■□□□□ 0.9
UBE2D4-209ENST00000454428 MICALL1Q8N3F8 863 aa20.65■□□□□ 0.9
UBE2D4-209ENST00000454428 TRPV6Q9H1D0 765 aa20.65■□□□□ 0.9
UBE2D4-209ENST00000454428 MTIF3Q9H2K0 278 aaKnown RBP20.65■□□□□ 0.9
UBE2D4-209ENST00000454428 NYAP2Q9P242 653 aa20.65■□□□□ 0.9
UBE2D4-209ENST00000454428 GNEQ9Y223 722 aaKnown RBP20.65■□□□□ 0.9
UBE2D4-209ENST00000454428 B4GALT4O60513 344 aa20.64■□□□□ 0.89
UBE2D4-209ENST00000454428 CNTN2Q02246 1040 aa20.64■□□□□ 0.89
UBE2D4-209ENST00000454428 ANKRD35Q8N283 1001 aa20.64■□□□□ 0.89
UBE2D4-209ENST00000454428 EPHX3Q9H6B9 360 aa20.64■□□□□ 0.89
UBE2D4-209ENST00000454428 PCDHA11Q9Y5I1 949 aa20.64■□□□□ 0.89
UBE2D4-209ENST00000454428 SLC4A4Q9Y6R1 1079 aa20.64■□□□□ 0.89
UBE2D4-209ENST00000454428 IGKV6D-41A0A0C4DH26 115 aa20.63■□□□□ 0.89
UBE2D4-209ENST00000454428 RFXAPO00287 272 aa20.63■□□□□ 0.89
UBE2D4-209ENST00000454428 ERC2O15083 957 aa20.63■□□□□ 0.89
UBE2D4-209ENST00000454428 ZBED4O75132 1171 aa20.63■□□□□ 0.89
UBE2D4-209ENST00000454428 ITGA7Q13683 1181 aa20.63■□□□□ 0.89
UBE2D4-209ENST00000454428 AMOTL1Q8IY63 956 aa20.63■□□□□ 0.89
UBE2D4-209ENST00000454428 CLASRPQ8N2M8 674 aaKnown RBP20.63■□□□□ 0.89
UBE2D4-209ENST00000454428 FAM133AQ8N9E0 248 aa20.63■□□□□ 0.89
UBE2D4-209ENST00000454428 KIFC2Q96AC6 838 aa20.63■□□□□ 0.89
UBE2D4-209ENST00000454428 AGBL1Q96MI9 1066 aa20.63■□□□□ 0.89
UBE2D4-209ENST00000454428 LRFN3Q9BTN0 628 aa20.63■□□□□ 0.89
UBE2D4-209ENST00000454428 PUS7LQ9H0K6 701 aaKnown RBP20.63■□□□□ 0.89
UBE2D4-209ENST00000454428 TSPYL2Q9H2G4 693 aaPredicted RBP20.63■□□□□ 0.89
UBE2D4-209ENST00000454428 BOLA2Q9H3K6 86 aa20.63■□□□□ 0.89
UBE2D4-209ENST00000454428 MTCH2Q9Y6C9 303 aa20.63■□□□□ 0.89
UBE2D4-209ENST00000454428 DDX49Q9Y6V7 483 aaKnown RBP20.63■□□□□ 0.89
UBE2D4-209ENST00000454428 SCN5AQ14524 2016 aa20.62■□□□□ 0.89
UBE2D4-209ENST00000454428 EPOPA6NHQ4 379 aa20.62■□□□□ 0.89
UBE2D4-209ENST00000454428 POU3F3P20264 500 aaPredicted RBP20.62■□□□□ 0.89
UBE2D4-209ENST00000454428 TNFAIP2Q03169 654 aa20.62■□□□□ 0.89
UBE2D4-209ENST00000454428 UBE3CQ15386 1083 aa20.62■□□□□ 0.89
UBE2D4-209ENST00000454428 HSP90AB4PQ58FF6 505 aa20.62■□□□□ 0.89
UBE2D4-209ENST00000454428 TMEM63BQ5T3F8 832 aa20.62■□□□□ 0.89
UBE2D4-209ENST00000454428 CHST13Q8NET6 341 aa20.62■□□□□ 0.89
UBE2D4-209ENST00000454428 SCLYQ96I15 445 aa20.62■□□□□ 0.89
UBE2D4-209ENST00000454428 SLC4A7Q9Y6M7 1214 aa20.62■□□□□ 0.89
UBE2D4-209ENST00000454428 LCTP09848 1927 aa20.61■□□□□ 0.89
UBE2D4-209ENST00000454428 SOWAHBA6NEL2 793 aa20.61■□□□□ 0.89
UBE2D4-209ENST00000454428 CABYRO75952 493 aa20.61■□□□□ 0.89
UBE2D4-209ENST00000454428 IFIT2P09913 472 aaKnown RBP20.61■□□□□ 0.89
UBE2D4-209ENST00000454428 PSMC6P62333 389 aa20.61■□□□□ 0.89
UBE2D4-209ENST00000454428 FSCN1Q16658 493 aaKnown RBP20.61■□□□□ 0.89
UBE2D4-209ENST00000454428 TLK2Q86UE8 772 aa20.61■□□□□ 0.89
UBE2D4-209ENST00000454428 KIF1BPQ96EK5 621 aa20.61■□□□□ 0.89
UBE2D4-209ENST00000454428 HAUS7Q99871 368 aa20.61■□□□□ 0.89
UBE2D4-209ENST00000454428 FBXO40Q9UH90 709 aa20.61■□□□□ 0.89
UBE2D4-209ENST00000454428 SMPD1P17405 629 aa20.6■□□□□ 0.89
UBE2D4-209ENST00000454428 ATP5JP18859 108 aa20.6■□□□□ 0.89
UBE2D4-209ENST00000454428 OAZ1P54368 228 aa20.6■□□□□ 0.89
UBE2D4-209ENST00000454428 TTLL4Q14679 1199 aa20.6■□□□□ 0.89
UBE2D4-209ENST00000454428 KRT40Q6A162 431 aa20.6■□□□□ 0.89
UBE2D4-209ENST00000454428 STK11IPQ8N1F8 1099 aa20.6■□□□□ 0.89
UBE2D4-209ENST00000454428 ARPP21Q9UBL0 812 aaPredicted RBP20.6■□□□□ 0.89
UBE2D4-209ENST00000454428 CLIP2Q9UDT6 1046 aa20.6■□□□□ 0.89
UBE2D4-209ENST00000454428 ARIH1Q9Y4X5 557 aaPredicted RBP20.6■□□□□ 0.89
UBE2D4-209ENST00000454428 ARHGEF15O94989 841 aa20.59■□□□□ 0.89
UBE2D4-209ENST00000454428 ATP2A2P16615 1042 aaKnown RBP20.59■□□□□ 0.89
UBE2D4-209ENST00000454428 AAK1Q2M2I8 961 aa20.59■□□□□ 0.89
UBE2D4-209ENST00000454428 SBK1Q52WX2 424 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms