RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 CCDC174Q6PII3 467 aa32.63■■■□□ 2.81
SMARCC1-203ENST00000454240 RUFY3Q7L099 469 aa32.63■■■□□ 2.81
SMARCC1-203ENST00000454240 ADGRF4Q8IZF3 695 aa32.63■■■□□ 2.81
SMARCC1-203ENST00000454240 NUP133Q8WUM0 1156 aa32.63■■■□□ 2.81
SMARCC1-203ENST00000454240 IL17RAQ96F46 866 aa32.63■■■□□ 2.81
SMARCC1-203ENST00000454240 AGBL1Q96MI9 1066 aa32.63■■■□□ 2.81
SMARCC1-203ENST00000454240 MYL10Q9BUA6 226 aa32.63■■■□□ 2.81
SMARCC1-203ENST00000454240 SLC12A7Q9Y666 1083 aa32.63■■■□□ 2.81
SMARCC1-203ENST00000454240 ABRAQ8N0Z2 381 aa32.62■■■□□ 2.81
SMARCC1-203ENST00000454240 AGXT2Q9BYV1 514 aa32.62■■■□□ 2.81
SMARCC1-203ENST00000454240 ICAM1P05362 532 aa32.61■■■□□ 2.81
SMARCC1-203ENST00000454240 CALM1P0DP23 149 aa32.61■■■□□ 2.81
SMARCC1-203ENST00000454240 CALM2P0DP24 149 aa32.61■■■□□ 2.81
SMARCC1-203ENST00000454240 CALM3P0DP25 149 aa32.61■■■□□ 2.81
SMARCC1-203ENST00000454240 Q6ZUG5 572 aa32.61■■■□□ 2.81
SMARCC1-203ENST00000454240 BRPF3Q9ULD4 1205 aa32.61■■■□□ 2.81
SMARCC1-203ENST00000454240 CENPFP49454 3210 aa32.61■■■□□ 2.81
SMARCC1-203ENST00000454240 SLC4A3P48751 1232 aa32.6■■■□□ 2.81
SMARCC1-203ENST00000454240 MAP2K5Q13163 448 aa32.6■■■□□ 2.81
SMARCC1-203ENST00000454240 ABHD8Q96I13 439 aa32.6■■■□□ 2.81
SMARCC1-203ENST00000454240 CYP46A1Q9Y6A2 500 aa32.6■■■□□ 2.81
SMARCC1-203ENST00000454240 FCER1AP12319 257 aa32.59■■■□□ 2.81
SMARCC1-203ENST00000454240 XRCC5P13010 732 aaKnown RBP32.59■■■□□ 2.81
SMARCC1-203ENST00000454240 TKFCQ3LXA3 575 aa32.59■■■□□ 2.81
SMARCC1-203ENST00000454240 APOA5Q6Q788 366 aa32.59■■■□□ 2.81
SMARCC1-203ENST00000454240 DHX30Q7L2E3 1194 aaKnown RBP eCLIP32.59■■■□□ 2.81
SMARCC1-203ENST00000454240 CHST13Q8NET6 341 aa32.59■■■□□ 2.81
SMARCC1-203ENST00000454240 CTCFLQ8NI51 663 aaPredicted RBP32.59■■■□□ 2.81
SMARCC1-203ENST00000454240 PXYLP1Q8TE99 480 aa32.59■■■□□ 2.81
SMARCC1-203ENST00000454240 JMJD4Q9H9V9 463 aa32.59■■■□□ 2.81
SMARCC1-203ENST00000454240 BAZ2BQ9UIF8 2168 aaKnown RBP32.58■■■□□ 2.81
SMARCC1-203ENST00000454240 ADCY3O60266 1144 aa32.58■■■□□ 2.81
SMARCC1-203ENST00000454240 CYP2B6P20813 491 aa32.58■■■□□ 2.81
SMARCC1-203ENST00000454240 ADORA2AP29274 412 aa32.58■■■□□ 2.81
SMARCC1-203ENST00000454240 KIF5BP33176 963 aa32.58■■■□□ 2.81
SMARCC1-203ENST00000454240 RGS2P41220 211 aa32.58■■■□□ 2.81
SMARCC1-203ENST00000454240 FGD1P98174 961 aa32.58■■■□□ 2.81
SMARCC1-203ENST00000454240 SLC35G1Q2M3R5 365 aa32.58■■■□□ 2.81
SMARCC1-203ENST00000454240 RIOX1Q9H6W3 641 aa32.58■■■□□ 2.81
SMARCC1-203ENST00000454240 FBXO40Q9UH90 709 aa32.58■■■□□ 2.81
SMARCC1-203ENST00000454240 CCPG1Q9ULG6 757 aa32.58■■■□□ 2.81
SMARCC1-203ENST00000454240 HOXC6P09630 235 aa32.57■■■□□ 2.8
SMARCC1-203ENST00000454240 RXRAP19793 462 aa32.57■■■□□ 2.8
SMARCC1-203ENST00000454240 GRK4P32298 578 aa32.57■■■□□ 2.8
SMARCC1-203ENST00000454240 SLC9C1Q4G0N8 1177 aa32.57■■■□□ 2.8
SMARCC1-203ENST00000454240 SYNE3Q6ZMZ3 975 aa32.57■■■□□ 2.8
SMARCC1-203ENST00000454240 NBPF11Q86T75 865 aa32.57■■■□□ 2.8
SMARCC1-203ENST00000454240 SLAIN1Q8ND83 568 aa32.57■■■□□ 2.8
SMARCC1-203ENST00000454240 MTMR8Q96EF0 704 aa32.57■■■□□ 2.8
SMARCC1-203ENST00000454240 MMP19Q99542 508 aa32.57■■■□□ 2.8
SMARCC1-203ENST00000454240 UPF3BQ9BZI7 483 aaKnown RBP32.57■■■□□ 2.8
SMARCC1-203ENST00000454240 VAT1LQ9HCJ6 419 aa32.57■■■□□ 2.8
SMARCC1-203ENST00000454240 PNMA2Q9UL42 364 aa32.57■■■□□ 2.8
SMARCC1-203ENST00000454240 PLXNA1Q9UIW2 1896 aa32.57■■■□□ 2.8
SMARCC1-203ENST00000454240 CDC37Q16543 378 aaPredicted RBP32.56■■■□□ 2.8
SMARCC1-203ENST00000454240 FANCBQ8NB91 859 aa32.56■■■□□ 2.8
SMARCC1-203ENST00000454240 BRF1Q92994 677 aa32.56■■■□□ 2.8
SMARCC1-203ENST00000454240 ARMC5Q96C12 935 aa32.56■■■□□ 2.8
SMARCC1-203ENST00000454240 TRERF1Q96PN7 1200 aa32.56■■■□□ 2.8
SMARCC1-203ENST00000454240 KLF18A0A0U1RQI7 1052 aa32.55■■■□□ 2.8
SMARCC1-203ENST00000454240 CYTH3O43739 400 aa32.55■■■□□ 2.8
SMARCC1-203ENST00000454240 DHX16O60231 1041 aaKnown RBP32.55■■■□□ 2.8
SMARCC1-203ENST00000454240 ALAS1P13196 640 aa32.55■■■□□ 2.8
SMARCC1-203ENST00000454240 SMARCA1P28370 1054 aa32.55■■■□□ 2.8
SMARCC1-203ENST00000454240 KCTD2Q14681 263 aa32.55■■■□□ 2.8
SMARCC1-203ENST00000454240 MICU3Q86XE3 530 aa32.55■■■□□ 2.8
SMARCC1-203ENST00000454240 RAB11FIP4Q86YS3 637 aa32.55■■■□□ 2.8
SMARCC1-203ENST00000454240 SH3TC2Q8TF17 1288 aa32.55■■■□□ 2.8
SMARCC1-203ENST00000454240 APBA2Q99767 749 aa32.55■■■□□ 2.8
SMARCC1-203ENST00000454240 HOMER2Q9NSB8 354 aa32.55■■■□□ 2.8
SMARCC1-203ENST00000454240 RNF146Q9NTX7 359 aa32.55■■■□□ 2.8
SMARCC1-203ENST00000454240 ZBTB43O43298 467 aa32.54■■■□□ 2.8
SMARCC1-203ENST00000454240 COBLO75128 1261 aa32.54■■■□□ 2.8
SMARCC1-203ENST00000454240 ELNP15502 786 aa32.54■■■□□ 2.8
SMARCC1-203ENST00000454240 GNAQP50148 359 aa32.54■■■□□ 2.8
SMARCC1-203ENST00000454240 APOBRQ0VD83 1088 aa32.54■■■□□ 2.8
SMARCC1-203ENST00000454240 QRICH1Q2TAL8 776 aa32.54■■■□□ 2.8
SMARCC1-203ENST00000454240 CCDC144CPQ8IYA2 1237 aa32.54■■■□□ 2.8
SMARCC1-203ENST00000454240 LZTS2Q9BRK4 669 aa32.54■■■□□ 2.8
SMARCC1-203ENST00000454240 ACAD9Q9H845 621 aa32.54■■■□□ 2.8
SMARCC1-203ENST00000454240 TAL1P17542 331 aaPredicted RBP32.53■■■□□ 2.8
SMARCC1-203ENST00000454240 RCAN1P53805 252 aa32.53■■■□□ 2.8
SMARCC1-203ENST00000454240 DPP9Q86TI2 863 aa32.53■■■□□ 2.8
SMARCC1-203ENST00000454240 NPLOC4Q8TAT6 608 aa32.53■■■□□ 2.8
SMARCC1-203ENST00000454240 EVCP57679 992 aa32.52■■■□□ 2.8
SMARCC1-203ENST00000454240 TOB2Q14106 344 aaPredicted RBP32.52■■■□□ 2.8
SMARCC1-203ENST00000454240 MUM1L1Q5H9M0 696 aa32.52■■■□□ 2.8
SMARCC1-203ENST00000454240 TRMT44Q8IYL2 757 aaKnown RBP32.52■■■□□ 2.8
SMARCC1-203ENST00000454240 SPZ1Q9BXG8 430 aa32.52■■■□□ 2.8
SMARCC1-203ENST00000454240 PLEKHA8P1O95397 391 aa32.51■■■□□ 2.79
SMARCC1-203ENST00000454240 SRBD1Q8N5C6 995 aaKnown RBP32.51■■■□□ 2.79
SMARCC1-203ENST00000454240 TRIB2Q92519 343 aa32.51■■■□□ 2.79
SMARCC1-203ENST00000454240 ZNF333Q96JL9 665 aa32.51■■■□□ 2.79
SMARCC1-203ENST00000454240 PDRG1Q9NUG6 133 aa32.51■■■□□ 2.79
SMARCC1-203ENST00000454240 DNAJC25-GNG10A0A024R161 153 aa32.5■■■□□ 2.79
SMARCC1-203ENST00000454240 ZBTB5O15062 677 aa32.5■■■□□ 2.79
SMARCC1-203ENST00000454240 CCL14Q16627 93 aa32.5■■■□□ 2.79
SMARCC1-203ENST00000454240 ANKRD35Q8N283 1001 aa32.5■■■□□ 2.79
SMARCC1-203ENST00000454240 RBM28Q9NW13 759 aaKnown RBP32.5■■■□□ 2.79
SMARCC1-203ENST00000454240 SLC5A4Q9NY91 659 aa32.5■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms