RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 RASA1P20936 1047 aa6.91□□□□□ -1.3
SBDSP1-204ENST00000453858 IRS1P35568 1242 aa6.91□□□□□ -1.3
SBDSP1-204ENST00000453858 WDR4P57081 412 aaKnown RBP6.91□□□□□ -1.3
SBDSP1-204ENST00000453858 DCTN1Q14203 1278 aa6.91□□□□□ -1.3
SBDSP1-204ENST00000453858 TREML2Q5T2D2 321 aa6.91□□□□□ -1.3
SBDSP1-204ENST00000453858 Q6ZVU0 165 aa6.91□□□□□ -1.3
SBDSP1-204ENST00000453858 ANKRD33Q7Z3H0 272 aa6.91□□□□□ -1.3
SBDSP1-204ENST00000453858 FAM83AQ86UY5 434 aa6.91□□□□□ -1.3
SBDSP1-204ENST00000453858 FBXL6Q8N531 539 aa6.91□□□□□ -1.3
SBDSP1-204ENST00000453858 SLC44A5Q8NCS7 719 aa6.91□□□□□ -1.3
SBDSP1-204ENST00000453858 ARRDC4Q8NCT1 418 aa6.91□□□□□ -1.3
SBDSP1-204ENST00000453858 TOX2Q96NM4 488 aa6.91□□□□□ -1.3
SBDSP1-204ENST00000453858 ZNF341Q9BYN7 854 aa6.91□□□□□ -1.3
SBDSP1-204ENST00000453858 TMPRSS4Q9NRS4 437 aa6.91□□□□□ -1.3
SBDSP1-204ENST00000453858 DNAAF2Q9NVR5 837 aaKnown RBP6.91□□□□□ -1.3
SBDSP1-204ENST00000453858 MORF4L1Q9UBU8 362 aa6.91□□□□□ -1.3
SBDSP1-204ENST00000453858 TBX21Q9UL17 535 aa6.91□□□□□ -1.3
SBDSP1-204ENST00000453858 PCDHA11Q9Y5I1 949 aa6.91□□□□□ -1.3
SBDSP1-204ENST00000453858 UTYO14607 1347 aa6.91□□□□□ -1.3
SBDSP1-204ENST00000453858 MYBBP1AQ9BQG0 1328 aaKnown RBP6.91□□□□□ -1.3
SBDSP1-204ENST00000453858 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.9□□□□□ -1.3
SBDSP1-204ENST00000453858 PHF20L1A8MW92 1017 aa6.9□□□□□ -1.3
SBDSP1-204ENST00000453858 ARHGEF15O94989 841 aa6.9□□□□□ -1.3
SBDSP1-204ENST00000453858 ZIC2O95409 532 aaPredicted RBP6.9□□□□□ -1.3
SBDSP1-204ENST00000453858 ACRP10323 421 aa6.9□□□□□ -1.3
SBDSP1-204ENST00000453858 CSF2RAP15509 400 aa6.9□□□□□ -1.3
SBDSP1-204ENST00000453858 AVPR2P30518 371 aa6.9□□□□□ -1.3
SBDSP1-204ENST00000453858 GCLCP48506 637 aaPredicted RBP6.9□□□□□ -1.3
SBDSP1-204ENST00000453858 TNNI2P48788 182 aa6.9□□□□□ -1.3
SBDSP1-204ENST00000453858 RBM5P52756 815 aaKnown RBP eCLIP6.9□□□□□ -1.3
SBDSP1-204ENST00000453858 CACNB3P54284 484 aa6.9□□□□□ -1.3
SBDSP1-204ENST00000453858 NEUROD1Q13562 356 aa6.9□□□□□ -1.3
SBDSP1-204ENST00000453858 EPHA10Q5JZY3 1008 aa6.9□□□□□ -1.3
SBDSP1-204ENST00000453858 FKBP1CQ5VVH2 108 aa6.9□□□□□ -1.3
SBDSP1-204ENST00000453858 MORC1Q86VD1 984 aa6.9□□□□□ -1.3
SBDSP1-204ENST00000453858 ANKRD18AQ8IVF6 992 aa6.9□□□□□ -1.3
SBDSP1-204ENST00000453858 NEK9Q8TD19 979 aa6.9□□□□□ -1.3
SBDSP1-204ENST00000453858 XAGE3Q8WTP9 111 aa6.9□□□□□ -1.3
SBDSP1-204ENST00000453858 FERMT2Q96AC1 680 aa6.9□□□□□ -1.3
SBDSP1-204ENST00000453858 VWCEQ96DN2 955 aa6.9□□□□□ -1.3
SBDSP1-204ENST00000453858 CYLDQ9NQC7 956 aa6.9□□□□□ -1.3
SBDSP1-204ENST00000453858 TMEM39AQ9NV64 488 aa6.9□□□□□ -1.3
SBDSP1-204ENST00000453858 MUTYHQ9UIF7 546 aa6.9□□□□□ -1.3
SBDSP1-204ENST00000453858 AGTPBP1Q9UPW5 1226 aa6.9□□□□□ -1.3
SBDSP1-204ENST00000453858 ZHX2Q9Y6X8 837 aa6.9□□□□□ -1.3
SBDSP1-204ENST00000453858 HECTD1Q9ULT8 2610 aa6.9□□□□□ -1.31
SBDSP1-204ENST00000453858 COL12A1Q99715 3063 aa6.9□□□□□ -1.31
SBDSP1-204ENST00000453858 SOBPA7XYQ1 873 aa6.89□□□□□ -1.31
SBDSP1-204ENST00000453858 DIAPH1O60610 1272 aaKnown RBP6.89□□□□□ -1.31
SBDSP1-204ENST00000453858 PEX10O60683 326 aa6.89□□□□□ -1.31
SBDSP1-204ENST00000453858 TIMP2P16035 220 aa6.89□□□□□ -1.31
SBDSP1-204ENST00000453858 PTPRAP18433 802 aa6.89□□□□□ -1.31
SBDSP1-204ENST00000453858 PTK7Q13308 1070 aa6.89□□□□□ -1.31
SBDSP1-204ENST00000453858 GRB10Q13322 594 aa6.89□□□□□ -1.31
SBDSP1-204ENST00000453858 PPIGQ13427 754 aaKnown RBP eCLIP6.89□□□□□ -1.31
SBDSP1-204ENST00000453858 DCAF15Q66K64 600 aa6.89□□□□□ -1.31
SBDSP1-204ENST00000453858 GADL1Q6ZQY3 521 aa6.89□□□□□ -1.31
SBDSP1-204ENST00000453858 C15orf52Q6ZUT6 534 aaKnown RBP6.89□□□□□ -1.31
SBDSP1-204ENST00000453858 HOMEZQ8IX15 550 aa6.89□□□□□ -1.31
SBDSP1-204ENST00000453858 SIX5Q8N196 739 aa6.89□□□□□ -1.31
SBDSP1-204ENST00000453858 SOCS4Q8WXH5 440 aa6.89□□□□□ -1.31
SBDSP1-204ENST00000453858 HPS1Q92902 700 aa6.89□□□□□ -1.31
SBDSP1-204ENST00000453858 ITPKCQ96DU7 683 aa6.89□□□□□ -1.31
SBDSP1-204ENST00000453858 OSBPL3Q9H4L5 887 aa6.89□□□□□ -1.31
SBDSP1-204ENST00000453858 CERS4Q9HA82 394 aa6.89□□□□□ -1.31
SBDSP1-204ENST00000453858 PRKAG3Q9UGI9 489 aa6.89□□□□□ -1.31
SBDSP1-204ENST00000453858 PCDHGA11Q9Y5H2 935 aa6.89□□□□□ -1.31
SBDSP1-204ENST00000453858 M0R2N6 131 aa6.88□□□□□ -1.31
SBDSP1-204ENST00000453858 BACH1O14867 736 aa6.88□□□□□ -1.31
SBDSP1-204ENST00000453858 CAPN5O15484 640 aaPredicted RBP6.88□□□□□ -1.31
SBDSP1-204ENST00000453858 UPP2O95045 317 aa6.88□□□□□ -1.31
SBDSP1-204ENST00000453858 ADH1AP07327 375 aa6.88□□□□□ -1.31
SBDSP1-204ENST00000453858 KCNA5P22460 613 aa6.88□□□□□ -1.31
SBDSP1-204ENST00000453858 LRRC41Q15345 812 aa6.88□□□□□ -1.31
SBDSP1-204ENST00000453858 CCDC152Q4G0S7 254 aa6.88□□□□□ -1.31
SBDSP1-204ENST00000453858 CCDC102BQ68D86 513 aa6.88□□□□□ -1.31
SBDSP1-204ENST00000453858 ANKMY2Q8IV38 441 aa6.88□□□□□ -1.31
SBDSP1-204ENST00000453858 ADHFE1Q8IWW8 467 aa6.88□□□□□ -1.31
SBDSP1-204ENST00000453858 TDRD7Q8NHU6 1098 aaKnown RBP6.88□□□□□ -1.31
SBDSP1-204ENST00000453858 HOOK2Q96ED9 719 aa6.88□□□□□ -1.31
SBDSP1-204ENST00000453858 UPF3BQ9BZI7 483 aaKnown RBP6.88□□□□□ -1.31
SBDSP1-204ENST00000453858 TXNRD2Q9NNW7 524 aa6.88□□□□□ -1.31
SBDSP1-204ENST00000453858 LMCD1Q9NZU5 365 aa6.88□□□□□ -1.31
SBDSP1-204ENST00000453858 PHF24Q9UPV7 400 aa6.88□□□□□ -1.31
SBDSP1-204ENST00000453858 USTQ9Y2C2 406 aa6.88□□□□□ -1.31
SBDSP1-204ENST00000453858 CFAP46Q8IYW2 2715 aa6.88□□□□□ -1.31
SBDSP1-204ENST00000453858 IGF2RP11717 2491 aa6.88□□□□□ -1.31
SBDSP1-204ENST00000453858 PTPRFP10586 1907 aa6.88□□□□□ -1.31
SBDSP1-204ENST00000453858 USP17L15C9J2P7 530 aa6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 USP17L10C9JJH3 530 aa6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 USP17L13C9JLJ4 530 aa6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 USP17L12C9JPN9 530 aa6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 USP17L11C9JVI0 530 aa6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 USP17L21D6R901 530 aa6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 USP17L18D6R9N7 530 aa6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 USP17L22D6RA61 530 aa6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 USP17L17D6RBQ6 530 aa6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 USP17L19D6RCP7 530 aa6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 USP17L20D6RJB6 530 aa6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 SNAP23O00161 211 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms