RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 RUFY4Q6ZNE9 571 aa18.44■□□□□ 0.54
TCOF1-206ENST00000445265 TNS3Q68CZ2 1445 aa18.44■□□□□ 0.54
TCOF1-206ENST00000445265 CALRP27797 417 aaKnown RBP18.44■□□□□ 0.54
TCOF1-206ENST00000445265 KRT31Q15323 416 aa18.44■□□□□ 0.54
TCOF1-206ENST00000445265 SYNE4Q8N205 404 aa18.44■□□□□ 0.54
TCOF1-206ENST00000445265 ENGASEQ8NFI3 743 aa18.44■□□□□ 0.54
TCOF1-206ENST00000445265 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.44■□□□□ 0.542e-6■■■■■ 129.4
TCOF1-206ENST00000445265 TNFAIP3P21580 790 aa18.44■□□□□ 0.54
TCOF1-206ENST00000445265 CTNNA2P26232 953 aa18.44■□□□□ 0.54
TCOF1-206ENST00000445265 GTF2A1P52655 376 aaPredicted RBP18.44■□□□□ 0.54
TCOF1-206ENST00000445265 THAP9Q9H5L6 903 aa18.44■□□□□ 0.54
TCOF1-206ENST00000445265 NCAPH2Q6IBW4 605 aa18.43■□□□□ 0.54
TCOF1-206ENST00000445265 CCDC91Q7Z6B0 441 aa18.43■□□□□ 0.54
TCOF1-206ENST00000445265 RASGRP4Q8TDF6 673 aa18.43■□□□□ 0.54
TCOF1-206ENST00000445265 BICD1Q96G01 975 aa18.43■□□□□ 0.54
TCOF1-206ENST00000445265 PCDHA12Q9UN75 941 aa18.43■□□□□ 0.54
TCOF1-206ENST00000445265 ANKRD7Q92527 254 aa18.43■□□□□ 0.54
TCOF1-206ENST00000445265 NDUFA10O95299 355 aa18.43■□□□□ 0.54
TCOF1-206ENST00000445265 PLEKHA8P1O95397 391 aa18.43■□□□□ 0.54
TCOF1-206ENST00000445265 FDPSP14324 419 aaKnown RBP18.43■□□□□ 0.54
TCOF1-206ENST00000445265 SYCE1Q8N0S2 351 aa18.43■□□□□ 0.54
TCOF1-206ENST00000445265 PPM1EQ8WY54 764 aa18.43■□□□□ 0.54
TCOF1-206ENST00000445265 INCENPQ9NQS7 918 aa18.43■□□□□ 0.54
TCOF1-206ENST00000445265 HDAC9Q9UKV0 1011 aa18.43■□□□□ 0.54
TCOF1-206ENST00000445265 MORC2Q9Y6X9 1032 aaPredicted RBP18.43■□□□□ 0.54
TCOF1-206ENST00000445265 CYP2D7A0A087X1C5 515 aa18.43■□□□□ 0.54
TCOF1-206ENST00000445265 CTIFO43310 598 aaKnown RBP18.43■□□□□ 0.54
TCOF1-206ENST00000445265 ATP2C2O75185 946 aa18.43■□□□□ 0.54
TCOF1-206ENST00000445265 CCDC170Q8IYT3 715 aa18.43■□□□□ 0.54
TCOF1-206ENST00000445265 LSM14BQ9BX40 385 aaKnown RBP18.43■□□□□ 0.54
TCOF1-206ENST00000445265 GSG1L2A8MUP6 293 aa18.42■□□□□ 0.54
TCOF1-206ENST00000445265 CCNE1P24864 410 aa18.42■□□□□ 0.54
TCOF1-206ENST00000445265 ZBED6P86452 979 aa18.42■□□□□ 0.54
TCOF1-206ENST00000445265 TCP11X2Q5H9J9 407 aa18.42■□□□□ 0.54
TCOF1-206ENST00000445265 GPIHBP1Q8IV16 184 aa18.42■□□□□ 0.54
TCOF1-206ENST00000445265 TLDC2A0PJX2 215 aa18.42■□□□□ 0.54
TCOF1-206ENST00000445265 FAM26FQ5R3K3 315 aa18.42■□□□□ 0.54
TCOF1-206ENST00000445265 POTEDQ86YR6 584 aa18.42■□□□□ 0.54
TCOF1-206ENST00000445265 OGFOD1Q8N543 542 aa18.42■□□□□ 0.54
TCOF1-206ENST00000445265 TUBE1Q9UJT0 475 aa18.42■□□□□ 0.54
TCOF1-206ENST00000445265 KIF4AO95239 1232 aa18.42■□□□□ 0.54
TCOF1-206ENST00000445265 E4F1Q66K89 784 aaPredicted RBP18.42■□□□□ 0.54
TCOF1-206ENST00000445265 TOGARAM2Q6ZUX3 1019 aa18.42■□□□□ 0.54
TCOF1-206ENST00000445265 BRINP3Q76B58 766 aa18.42■□□□□ 0.54
TCOF1-206ENST00000445265 DGKHQ86XP1 1220 aa18.42■□□□□ 0.54
TCOF1-206ENST00000445265 KLHL7Q8IXQ5 586 aa18.42■□□□□ 0.54
TCOF1-206ENST00000445265 IL17RAQ96F46 866 aa18.42■□□□□ 0.54
TCOF1-206ENST00000445265 TMEM110-MUSTN1A8MSY1 372 aa18.42■□□□□ 0.54
TCOF1-206ENST00000445265 MCTP2Q6DN12 878 aa18.42■□□□□ 0.54
TCOF1-206ENST00000445265 EXOC4Q96A65 974 aa18.42■□□□□ 0.54
TCOF1-206ENST00000445265 UTP11Q9Y3A2 253 aaKnown RBP18.42■□□□□ 0.54
TCOF1-206ENST00000445265 ACTN4O43707 911 aaKnown RBP18.41■□□□□ 0.54
TCOF1-206ENST00000445265 CALCOCO2Q13137 446 aa18.41■□□□□ 0.54
TCOF1-206ENST00000445265 METTL16Q86W50 562 aaKnown RBP18.41■□□□□ 0.54
TCOF1-206ENST00000445265 EEF2KMTQ96G04 330 aa18.41■□□□□ 0.54
TCOF1-206ENST00000445265 SELENOSQ9BQE4 189 aa18.41■□□□□ 0.54
TCOF1-206ENST00000445265 BSDC1Q9NW68 430 aaPredicted RBP18.41■□□□□ 0.54
TCOF1-206ENST00000445265 LEMD3Q9Y2U8 911 aa18.41■□□□□ 0.54
TCOF1-206ENST00000445265 ENC1O14682 589 aa18.41■□□□□ 0.54
TCOF1-206ENST00000445265 ATP2B4P23634 1241 aa18.41■□□□□ 0.54
TCOF1-206ENST00000445265 CDC25AP30304 524 aa18.41■□□□□ 0.54
TCOF1-206ENST00000445265 HPDP32754 393 aaPredicted RBP18.41■□□□□ 0.54
TCOF1-206ENST00000445265 BTDP43251 543 aa18.41■□□□□ 0.54
TCOF1-206ENST00000445265 RAD51AP2Q09MP3 1159 aa18.41■□□□□ 0.54
TCOF1-206ENST00000445265 SEL1L2Q5TEA6 688 aa18.41■□□□□ 0.54
TCOF1-206ENST00000445265 TMED8Q6PL24 325 aaPredicted RBP18.41■□□□□ 0.54
TCOF1-206ENST00000445265 GPBP1Q86WP2 473 aa18.41■□□□□ 0.54
TCOF1-206ENST00000445265 ZNF512BQ96KM6 892 aaPredicted RBP18.41■□□□□ 0.54
TCOF1-206ENST00000445265 FAM98CQ17RN3 349 aaKnown RBP18.41■□□□□ 0.54
TCOF1-206ENST00000445265 PEX26Q7Z412 305 aa18.41■□□□□ 0.54
TCOF1-206ENST00000445265 LARP4BQ92615 738 aaKnown RBP18.41■□□□□ 0.54
TCOF1-206ENST00000445265 DISC1Q9NRI5 854 aa18.41■□□□□ 0.54
TCOF1-206ENST00000445265 OXER1Q8TDS5 423 aa18.4■□□□□ 0.54
TCOF1-206ENST00000445265 SH3GLB2Q9NR46 395 aa18.4■□□□□ 0.54
TCOF1-206ENST00000445265 STK17AQ9UEE5 414 aa18.4■□□□□ 0.54
TCOF1-206ENST00000445265 PNPLA7Q6ZV29 1317 aa18.4■□□□□ 0.54
TCOF1-206ENST00000445265 GOLGA8KD6RF30 607 aa18.4■□□□□ 0.54
TCOF1-206ENST00000445265 HOXA7P31268 230 aaPredicted RBP18.4■□□□□ 0.54
TCOF1-206ENST00000445265 INPP5BP32019 993 aa18.4■□□□□ 0.54
TCOF1-206ENST00000445265 ERFEQ4G0M1 354 aa18.4■□□□□ 0.54
TCOF1-206ENST00000445265 CCDC114Q96M63 670 aa18.4■□□□□ 0.54
TCOF1-206ENST00000445265 PSTPIP2Q9H939 334 aa18.4■□□□□ 0.54
TCOF1-206ENST00000445265 C1orf167Q5SNV9 1468 aa18.4■□□□□ 0.54
TCOF1-206ENST00000445265 SLIT1O75093 1534 aa18.4■□□□□ 0.54
TCOF1-206ENST00000445265 IBSPP21815 317 aaPredicted RBP18.4■□□□□ 0.54
TCOF1-206ENST00000445265 MAN2A1Q16706 1144 aa18.4■□□□□ 0.54
TCOF1-206ENST00000445265 ENAHQ8N8S7 591 aaPredicted RBP18.4■□□□□ 0.54
TCOF1-206ENST00000445265 RGS22Q8NE09 1264 aa18.4■□□□□ 0.54
TCOF1-206ENST00000445265 PANK4Q9NVE7 773 aa18.4■□□□□ 0.54
TCOF1-206ENST00000445265 ARMCX3Q9UH62 379 aaPredicted RBP18.4■□□□□ 0.54
TCOF1-206ENST00000445265 LMTK3Q96Q04 1460 aa18.39■□□□□ 0.54
TCOF1-206ENST00000445265 CSF1RP07333 972 aa18.39■□□□□ 0.54
TCOF1-206ENST00000445265 XRCC5P13010 732 aaKnown RBP18.39■□□□□ 0.54
TCOF1-206ENST00000445265 EZRP15311 586 aaKnown RBP18.39■□□□□ 0.54
TCOF1-206ENST00000445265 ANTXR2P58335 489 aa18.39■□□□□ 0.54
TCOF1-206ENST00000445265 MTMR3Q13615 1198 aa18.39■□□□□ 0.54
TCOF1-206ENST00000445265 CLUL1Q15846 466 aa18.39■□□□□ 0.54
TCOF1-206ENST00000445265 DHX37Q8IY37 1157 aaKnown RBP18.39■□□□□ 0.54
TCOF1-206ENST00000445265 SNAP23O00161 211 aa18.39■□□□□ 0.53
TCOF1-206ENST00000445265 RIC8AQ9NPQ8 531 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms