RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 REXO2Q9Y3B8 237 aaKnown RBP18.75■□□□□ 0.59
PMS1-213ENST00000441310 SMIM22K7EJ46 135 aa18.75■□□□□ 0.59
PMS1-213ENST00000441310 MAP2K1Q02750 393 aaPredicted RBP18.75■□□□□ 0.59
PMS1-213ENST00000441310 SLC51AQ86UW1 340 aa18.75■□□□□ 0.59
PMS1-213ENST00000441310 MICU3Q86XE3 530 aa18.75■□□□□ 0.59
PMS1-213ENST00000441310 TSEN2Q8NCE0 465 aaKnown RBP18.75■□□□□ 0.59
PMS1-213ENST00000441310 CCDC51Q96ER9 411 aa18.75■□□□□ 0.59
PMS1-213ENST00000441310 NAPBQ9H115 298 aa18.75■□□□□ 0.59
PMS1-213ENST00000441310 EPN1Q9Y6I3 576 aaPredicted RBP18.75■□□□□ 0.59
PMS1-213ENST00000441310 N4BP3O15049 544 aa18.74■□□□□ 0.59
PMS1-213ENST00000441310 RASSF9O75901 435 aa18.74■□□□□ 0.59
PMS1-213ENST00000441310 SLC7A5Q01650 507 aa18.74■□□□□ 0.59
PMS1-213ENST00000441310 CRYMQ14894 314 aa18.74■□□□□ 0.59
PMS1-213ENST00000441310 SPATA1Q5VX52 437 aa18.74■□□□□ 0.59
PMS1-213ENST00000441310 LCORLQ8N3X6 602 aa18.74■□□□□ 0.59
PMS1-213ENST00000441310 EPB41L4AQ9HCS5 686 aaPredicted RBP18.74■□□□□ 0.59
PMS1-213ENST00000441310 USP21Q9UK80 565 aa18.74■□□□□ 0.59
PMS1-213ENST00000441310 CD44P16070 742 aaKnown RBP18.74■□□□□ 0.59
PMS1-213ENST00000441310 AFMP43652 599 aa18.74■□□□□ 0.59
PMS1-213ENST00000441310 SARSP49591 514 aaKnown RBP18.74■□□□□ 0.59
PMS1-213ENST00000441310 APBA1Q02410 837 aa18.74■□□□□ 0.59
PMS1-213ENST00000441310 SNCBQ16143 134 aa18.74■□□□□ 0.59
PMS1-213ENST00000441310 ZNF473Q8WTR7 871 aaKnown RBP18.74■□□□□ 0.59
PMS1-213ENST00000441310 JADE2Q9NQC1 790 aa18.74■□□□□ 0.59
PMS1-213ENST00000441310 TAF1P21675 1872 aa18.74■□□□□ 0.59
PMS1-213ENST00000441310 ATXN2Q99700 1313 aaKnown RBP18.74■□□□□ 0.59
PMS1-213ENST00000441310 PSMD14O00487 310 aa18.74■□□□□ 0.59
PMS1-213ENST00000441310 LSP1P33241 339 aa18.74■□□□□ 0.59
PMS1-213ENST00000441310 SKOR1P84550 965 aa18.74■□□□□ 0.59
PMS1-213ENST00000441310 ZNF512BQ96KM6 892 aaPredicted RBP18.74■□□□□ 0.59
PMS1-213ENST00000441310 RNPC3Q96LT9 517 aaKnown RBP18.74■□□□□ 0.59
PMS1-213ENST00000441310 DMGDHQ9UI17 866 aaKnown RBP18.74■□□□□ 0.59
PMS1-213ENST00000441310 PPP1R12BO60237 982 aaPredicted RBP18.73■□□□□ 0.59
PMS1-213ENST00000441310 NDUFA10O95299 355 aa18.73■□□□□ 0.59
PMS1-213ENST00000441310 CCNHP51946 323 aaPredicted RBP18.73■□□□□ 0.59
PMS1-213ENST00000441310 HDLBPQ00341 1268 aaKnown RBP18.73■□□□□ 0.59
PMS1-213ENST00000441310 NFXL1Q6ZNB6 911 aa18.73■□□□□ 0.59
PMS1-213ENST00000441310 SPATS2Q86XZ4 545 aaKnown RBP18.73■□□□□ 0.59
PMS1-213ENST00000441310 IFNL3Q8IZI9 196 aa18.73■□□□□ 0.59
PMS1-213ENST00000441310 ANKRD36CQ5JPF3 1778 aa18.73■□□□□ 0.59
PMS1-213ENST00000441310 A0A1B0GUA9 196 aa18.73■□□□□ 0.59
PMS1-213ENST00000441310 KRT14P02533 472 aa18.73■□□□□ 0.59
PMS1-213ENST00000441310 ERCC5P28715 1186 aaPredicted RBP18.73■□□□□ 0.59
PMS1-213ENST00000441310 CCDC70Q6NSX1 233 aa18.73■□□□□ 0.59
PMS1-213ENST00000441310 SLC4A4Q9Y6R1 1079 aa18.73■□□□□ 0.59
PMS1-213ENST00000441310 HSF2BPO75031 334 aa18.72■□□□□ 0.59
PMS1-213ENST00000441310 EZRP15311 586 aaKnown RBP18.72■□□□□ 0.59
PMS1-213ENST00000441310 KLRK1P26718 216 aa18.72■□□□□ 0.59
PMS1-213ENST00000441310 MRPL12P52815 198 aaKnown RBP18.72■□□□□ 0.59
PMS1-213ENST00000441310 PPARAQ07869 468 aa18.72■□□□□ 0.59
PMS1-213ENST00000441310 NNTQ13423 1086 aa18.72■□□□□ 0.59
PMS1-213ENST00000441310 CCDC82Q8N4S0 544 aa18.72■□□□□ 0.59
PMS1-213ENST00000441310 SDR42E1Q8WUS8 393 aa18.72■□□□□ 0.59
PMS1-213ENST00000441310 COL4A1P02462 1669 aa18.72■□□□□ 0.59
PMS1-213ENST00000441310 UBE2Q2LH0YL09 131 aa18.72■□□□□ 0.59
PMS1-213ENST00000441310 ERCC3P19447 782 aa18.72■□□□□ 0.59
PMS1-213ENST00000441310 PDE6BP35913 854 aa18.72■□□□□ 0.59
PMS1-213ENST00000441310 USP49Q70CQ1 688 aa18.72■□□□□ 0.59
PMS1-213ENST00000441310 CTAGE1Q96RT6 745 aa18.72■□□□□ 0.59
PMS1-213ENST00000441310 TACC3Q9Y6A5 838 aa18.72■□□□□ 0.59
PMS1-213ENST00000441310 NWD2Q9ULI1 1742 aa18.72■□□□□ 0.59
PMS1-213ENST00000441310 CYP7A1P22680 504 aa18.72■□□□□ 0.59
PMS1-213ENST00000441310 NBPF5PQ86XG9 351 aaPredicted RBP18.72■□□□□ 0.59
PMS1-213ENST00000441310 PARP9Q8IXQ6 854 aa18.72■□□□□ 0.59
PMS1-213ENST00000441310 RPGRIP1Q96KN7 1286 aa18.72■□□□□ 0.59
PMS1-213ENST00000441310 LRRC1Q9BTT6 524 aa18.72■□□□□ 0.59
PMS1-213ENST00000441310 CCNL1Q9UK58 526 aaPredicted RBP18.72■□□□□ 0.59
PMS1-213ENST00000441310 ATP2C2O75185 946 aa18.71■□□□□ 0.59
PMS1-213ENST00000441310 GBP2P32456 591 aaPredicted RBP18.71■□□□□ 0.59
PMS1-213ENST00000441310 NT5DC1Q5TFE4 455 aa18.71■□□□□ 0.59
PMS1-213ENST00000441310 ADGRA1Q86SQ6 560 aa18.71■□□□□ 0.59
PMS1-213ENST00000441310 TICAM2Q86XR7 235 aa18.71■□□□□ 0.59
PMS1-213ENST00000441310 EPN3Q9H201 632 aa18.71■□□□□ 0.59
PMS1-213ENST00000441310 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.71■□□□□ 0.59
PMS1-213ENST00000441310 TAB2Q9NYJ8 693 aa18.71■□□□□ 0.59
PMS1-213ENST00000441310 TFCP2L1Q9NZI6 479 aa18.71■□□□□ 0.59
PMS1-213ENST00000441310 ABCC12Q96J65 1359 aa18.71■□□□□ 0.59
PMS1-213ENST00000441310 TMCO5BA8MYB1 307 aa18.71■□□□□ 0.59
PMS1-213ENST00000441310 MINDY4BA8MYZ0 360 aa18.71■□□□□ 0.59
PMS1-213ENST00000441310 KIF3CO14782 793 aa18.71■□□□□ 0.59
PMS1-213ENST00000441310 VPS72Q15906 364 aa18.71■□□□□ 0.59
PMS1-213ENST00000441310 PAPD7Q5XG87 772 aaKnown RBP18.71■□□□□ 0.59
PMS1-213ENST00000441310 KIAA1328Q86T90 577 aa18.71■□□□□ 0.59
PMS1-213ENST00000441310 FAM228AQ86W67 206 aa18.71■□□□□ 0.59
PMS1-213ENST00000441310 HAUS4Q9H6D7 363 aa18.71■□□□□ 0.59
PMS1-213ENST00000441310 GSG1L2A8MUP6 293 aa18.7■□□□□ 0.58
PMS1-213ENST00000441310 IRF6O14896 467 aa18.7■□□□□ 0.58
PMS1-213ENST00000441310 ZPR1O75312 459 aa18.7■□□□□ 0.58
PMS1-213ENST00000441310 FECHP22830 423 aa18.7■□□□□ 0.58
PMS1-213ENST00000441310 TBC1D8BQ0IIM8 1120 aa18.7■□□□□ 0.58
PMS1-213ENST00000441310 FAM43BQ6ZT52 329 aaPredicted RBP18.7■□□□□ 0.58
PMS1-213ENST00000441310 TRIML1Q8N9V2 468 aa18.7■□□□□ 0.58
PMS1-213ENST00000441310 CCT8L2Q96SF2 557 aa18.7■□□□□ 0.58
PMS1-213ENST00000441310 SETDB2Q96T68 719 aa18.7■□□□□ 0.58
PMS1-213ENST00000441310 BCL9LQ86UU0 1499 aa18.7■□□□□ 0.58
PMS1-213ENST00000441310 TRIM29Q14134 588 aa18.7■□□□□ 0.58
PMS1-213ENST00000441310 CYB5D1Q6P9G0 228 aa18.7■□□□□ 0.58
PMS1-213ENST00000441310 HAUS2Q9NVX0 235 aa18.7■□□□□ 0.58
PMS1-213ENST00000441310 ANGEL1Q9UNK9 670 aaKnown RBP18.7■□□□□ 0.58
PMS1-213ENST00000441310 MINPP1Q9UNW1 487 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms