RNA–Protein interactions for RNA: ENST00000440375.1

PDGFB-203, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-203ENST00000440375 CCDC96Q2M329 555 aa14.11□□□□□ -0.15
PDGFB-203ENST00000440375 PPP4R3BQ5MIZ7 849 aa14.11□□□□□ -0.15
PDGFB-203ENST00000440375 TTBK2Q6IQ55 1244 aa14.11□□□□□ -0.15
PDGFB-203ENST00000440375 RCSD1Q6JBY9 416 aa14.11□□□□□ -0.15
PDGFB-203ENST00000440375 CCDC174Q6PII3 467 aa14.11□□□□□ -0.15
PDGFB-203ENST00000440375 MAMDC4Q6UXC1 1216 aa14.11□□□□□ -0.15
PDGFB-203ENST00000440375 FAM160B2Q86V87 743 aa14.11□□□□□ -0.15
PDGFB-203ENST00000440375 ANKRD35Q8N283 1001 aa14.11□□□□□ -0.15
PDGFB-203ENST00000440375 CHST13Q8NET6 341 aa14.11□□□□□ -0.15
PDGFB-203ENST00000440375 RNF146Q9NTX7 359 aa14.11□□□□□ -0.15
PDGFB-203ENST00000440375 ZHX1Q9UKY1 873 aaPredicted RBP14.11□□□□□ -0.15
PDGFB-203ENST00000440375 PRR12Q9ULL5 1215 aa14.11□□□□□ -0.15
PDGFB-203ENST00000440375 CNPY2Q9Y2B0 182 aa14.11□□□□□ -0.15
PDGFB-203ENST00000440375 ATP11BQ9Y2G3 1177 aa14.11□□□□□ -0.15
PDGFB-203ENST00000440375 DDX49Q9Y6V7 483 aaKnown RBP14.11□□□□□ -0.15
PDGFB-203ENST00000440375 SYNGAP1Q96PV0 1343 aa14.11□□□□□ -0.15
PDGFB-203ENST00000440375 PLA2G6O60733 806 aa14.1□□□□□ -0.15
PDGFB-203ENST00000440375 AKR1A1P14550 325 aa14.1□□□□□ -0.15
PDGFB-203ENST00000440375 IRX5P78411 483 aaPredicted RBP14.1□□□□□ -0.15
PDGFB-203ENST00000440375 SNX17Q15036 470 aa14.1□□□□□ -0.15
PDGFB-203ENST00000440375 TRIM60Q495X7 471 aa14.1□□□□□ -0.15
PDGFB-203ENST00000440375 CWC27Q6UX04 472 aaKnown RBP14.1□□□□□ -0.15
PDGFB-203ENST00000440375 SLC39A5Q6ZMH5 540 aa14.1□□□□□ -0.15
PDGFB-203ENST00000440375 CHURC1Q8WUH1 139 aa14.1□□□□□ -0.15
PDGFB-203ENST00000440375 TMEM47Q9BQJ4 181 aa14.1□□□□□ -0.15
PDGFB-203ENST00000440375 IL25Q9H293 177 aa14.1□□□□□ -0.15
PDGFB-203ENST00000440375 ACAD9Q9H845 621 aa14.1□□□□□ -0.15
PDGFB-203ENST00000440375 A1CFQ9NQ94 594 aaKnown RBP14.1□□□□□ -0.15
PDGFB-203ENST00000440375 DIAPH3Q9NSV4 1193 aa14.1□□□□□ -0.15
PDGFB-203ENST00000440375 FBXO40Q9UH90 709 aa14.1□□□□□ -0.15
PDGFB-203ENST00000440375 LAMA4Q16363 1823 aa14.1□□□□□ -0.15
PDGFB-203ENST00000440375 ASTN1O14525 1302 aa14.1□□□□□ -0.15
PDGFB-203ENST00000440375 FRMPD2Q68DX3 1309 aaPredicted RBP14.1□□□□□ -0.15
PDGFB-203ENST00000440375 LTBP2Q14767 1821 aa14.09□□□□□ -0.15
PDGFB-203ENST00000440375 SMCHD1A6NHR9 2005 aa14.09□□□□□ -0.15
PDGFB-203ENST00000440375 MYADML2A6NDP7 307 aa14.09□□□□□ -0.15
PDGFB-203ENST00000440375 ADAMTS4O75173 837 aa14.09□□□□□ -0.15
PDGFB-203ENST00000440375 ALAS1P13196 640 aa14.09□□□□□ -0.15
PDGFB-203ENST00000440375 SLC16A2P36021 539 aa14.09□□□□□ -0.15
PDGFB-203ENST00000440375 MUM1L1Q5H9M0 696 aa14.09□□□□□ -0.15
PDGFB-203ENST00000440375 AKNAD1Q5T1N1 836 aa14.09□□□□□ -0.15
PDGFB-203ENST00000440375 ARMCX2Q7L311 632 aa14.09□□□□□ -0.15
PDGFB-203ENST00000440375 ZNF467Q7Z7K2 595 aaPredicted RBP14.09□□□□□ -0.15
PDGFB-203ENST00000440375 MSL3Q8N5Y2 521 aaKnown RBP14.09□□□□□ -0.15
PDGFB-203ENST00000440375 FAM133AQ8N9E0 248 aa14.09□□□□□ -0.15
PDGFB-203ENST00000440375 DCAF4Q8WV16 495 aa14.09□□□□□ -0.15
PDGFB-203ENST00000440375 UBE2OQ9C0C9 1292 aaKnown RBP14.09□□□□□ -0.15
PDGFB-203ENST00000440375 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.09□□□□□ -0.15
PDGFB-203ENST00000440375 PHF24Q9UPV7 400 aa14.09□□□□□ -0.15
PDGFB-203ENST00000440375 LRRC37A2A6NM11 1700 aa14.09□□□□□ -0.15
PDGFB-203ENST00000440375 SYNRGQ9UMZ2 1314 aa14.09□□□□□ -0.15
PDGFB-203ENST00000440375 SOWAHBA6NEL2 793 aa14.08□□□□□ -0.16
PDGFB-203ENST00000440375 FDX1P10109 184 aa14.08□□□□□ -0.16
PDGFB-203ENST00000440375 TOP1P11387 765 aaKnown RBP14.08□□□□□ -0.16
PDGFB-203ENST00000440375 GSPT1P15170 499 aaKnown RBP14.08□□□□□ -0.16
PDGFB-203ENST00000440375 MFSD6Q6ZSS7 791 aa14.08□□□□□ -0.16
PDGFB-203ENST00000440375 CCDC144CPQ8IYA2 1237 aa14.08□□□□□ -0.16
PDGFB-203ENST00000440375 TDHQ8IZJ6 230 aa14.08□□□□□ -0.16
PDGFB-203ENST00000440375 TRERF1Q96PN7 1200 aa14.08□□□□□ -0.16
PDGFB-203ENST00000440375 KATNBL1Q9H079 304 aa14.08□□□□□ -0.16
PDGFB-203ENST00000440375 GPCPD1Q9NPB8 672 aa14.08□□□□□ -0.16
PDGFB-203ENST00000440375 TCP11L1Q9NUJ3 509 aa14.08□□□□□ -0.16
PDGFB-203ENST00000440375 MCM3APO60318 1980 aa14.08□□□□□ -0.16
PDGFB-203ENST00000440375 COL6A3P12111 3177 aa14.07□□□□□ -0.16
PDGFB-203ENST00000440375 A0A1W2PQ45 241 aaPredicted RBP14.07□□□□□ -0.16
PDGFB-203ENST00000440375 A0A1W2PQY0 241 aa14.07□□□□□ -0.16
PDGFB-203ENST00000440375 POTEB2H3BUK9 544 aa14.07□□□□□ -0.16
PDGFB-203ENST00000440375 PDHBP11177 359 aa14.07□□□□□ -0.16
PDGFB-203ENST00000440375 MFAP1P55081 439 aaKnown RBP14.07□□□□□ -0.16
PDGFB-203ENST00000440375 ACVR2BQ13705 512 aa14.07□□□□□ -0.16
PDGFB-203ENST00000440375 SYDE2Q5VT97 1194 aa14.07□□□□□ -0.16
PDGFB-203ENST00000440375 SH3RF1Q7Z6J0 888 aa14.07□□□□□ -0.16
PDGFB-203ENST00000440375 RNF180Q86T96 592 aa14.07□□□□□ -0.16
PDGFB-203ENST00000440375 PURBQ96QR8 312 aaKnown RBP14.07□□□□□ -0.16
PDGFB-203ENST00000440375 ZKSCAN3Q9BRR0 538 aa14.07□□□□□ -0.16
PDGFB-203ENST00000440375 RANBP17Q9H2T7 1088 aaKnown RBP14.07□□□□□ -0.16
PDGFB-203ENST00000440375 PRDM5Q9NQX1 630 aaPredicted RBP14.07□□□□□ -0.16
PDGFB-203ENST00000440375 PDLIM7Q9NR12 457 aa14.07□□□□□ -0.16
PDGFB-203ENST00000440375 FAM184BQ9ULE4 1060 aa14.07□□□□□ -0.16
PDGFB-203ENST00000440375 CCPG1Q9ULG6 757 aa14.07□□□□□ -0.16
PDGFB-203ENST00000440375 LCTP09848 1927 aa14.07□□□□□ -0.16
PDGFB-203ENST00000440375 ICAM1P05362 532 aa14.06□□□□□ -0.16
PDGFB-203ENST00000440375 PTGS1P23219 599 aa14.06□□□□□ -0.16
PDGFB-203ENST00000440375 TKFCQ3LXA3 575 aa14.06□□□□□ -0.16
PDGFB-203ENST00000440375 CCDC144BQ3MJ40 725 aa14.06□□□□□ -0.16
PDGFB-203ENST00000440375 CCSAPQ6IQ19 270 aaPredicted RBP14.06□□□□□ -0.16
PDGFB-203ENST00000440375 BTNL9Q6UXG8 535 aa14.06□□□□□ -0.16
PDGFB-203ENST00000440375 KLHDC9Q8NEP7 349 aa14.06□□□□□ -0.16
PDGFB-203ENST00000440375 CYP39A1Q9NYL5 469 aa14.06□□□□□ -0.16
PDGFB-203ENST00000440375 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.05□□□□□ -0.16
PDGFB-203ENST00000440375 TRIM43BA6NCK2 446 aa14.05□□□□□ -0.16
PDGFB-203ENST00000440375 NFIBO00712 420 aa14.05□□□□□ -0.16
PDGFB-203ENST00000440375 ZNF213O14771 459 aa14.05□□□□□ -0.16
PDGFB-203ENST00000440375 KDM4AO75164 1064 aa14.05□□□□□ -0.16
PDGFB-203ENST00000440375 SNHG28P0DPA3 235 aa14.05□□□□□ -0.16
PDGFB-203ENST00000440375 PCP11498 1178 aaKnown RBP14.05□□□□□ -0.16
PDGFB-203ENST00000440375 TLE2Q04725 743 aa14.05□□□□□ -0.16
PDGFB-203ENST00000440375 ZNF543Q08ER8 600 aa14.05□□□□□ -0.16
PDGFB-203ENST00000440375 TTC22Q5TAA0 569 aa14.05□□□□□ -0.16
PDGFB-203ENST00000440375 NSMFQ6X4W1 530 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms