RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 TTLL1O95922 423 aa11.78□□□□□ -0.52
CPNE1-218ENST00000439806 PDHBP11177 359 aa11.78□□□□□ -0.52
CPNE1-218ENST00000439806 ADCY7P51828 1080 aa11.78□□□□□ -0.52
CPNE1-218ENST00000439806 SPAG1Q07617 926 aa11.78□□□□□ -0.52
CPNE1-218ENST00000439806 PAK1Q13153 545 aa11.78□□□□□ -0.52
CPNE1-218ENST00000439806 TBX2Q13207 712 aaPredicted RBP11.78□□□□□ -0.52
CPNE1-218ENST00000439806 ORC2Q13416 577 aaPredicted RBP11.78□□□□□ -0.52
CPNE1-218ENST00000439806 CCDC96Q2M329 555 aa11.78□□□□□ -0.52
CPNE1-218ENST00000439806 LETM2Q2VYF4 491 aa11.78□□□□□ -0.52
CPNE1-218ENST00000439806 SPECC1LQ69YQ0 1117 aa11.78□□□□□ -0.52
CPNE1-218ENST00000439806 CDC42EP5Q6NZY7 148 aa11.78□□□□□ -0.52
CPNE1-218ENST00000439806 CABP7Q86V35 215 aa11.78□□□□□ -0.52
CPNE1-218ENST00000439806 PPFIBP1Q86W92 1011 aa11.78□□□□□ -0.52
CPNE1-218ENST00000439806 C2CD5Q86YS7 1000 aa11.78□□□□□ -0.52
CPNE1-218ENST00000439806 SMYD4Q8IYR2 804 aaPredicted RBP11.78□□□□□ -0.52
CPNE1-218ENST00000439806 REXO1Q8N1G1 1221 aaKnown RBP11.78□□□□□ -0.52
CPNE1-218ENST00000439806 MXD3Q9BW11 206 aa11.78□□□□□ -0.52
CPNE1-218ENST00000439806 CUEDC2Q9H467 287 aa11.78□□□□□ -0.52
CPNE1-218ENST00000439806 RIOX1Q9H6W3 641 aa11.78□□□□□ -0.52
CPNE1-218ENST00000439806 MAGEF1Q9HAY2 307 aa11.78□□□□□ -0.52
CPNE1-218ENST00000439806 GPCPD1Q9NPB8 672 aa11.78□□□□□ -0.52
CPNE1-218ENST00000439806 DDX4Q9NQI0 724 aaKnown RBP11.78□□□□□ -0.52
CPNE1-218ENST00000439806 SERPINB13Q9UIV8 391 aa11.78□□□□□ -0.52
CPNE1-218ENST00000439806 ZNF646O15015 1829 aaPredicted RBP11.77□□□□□ -0.52
CPNE1-218ENST00000439806 SIPA1L1O43166 1804 aa11.77□□□□□ -0.52
CPNE1-218ENST00000439806 ARHGAP6O43182 974 aa11.77□□□□□ -0.53
CPNE1-218ENST00000439806 ZSCAN12O43309 604 aa11.77□□□□□ -0.53
CPNE1-218ENST00000439806 CTIFO43310 598 aaKnown RBP11.77□□□□□ -0.53
CPNE1-218ENST00000439806 CCNT1O60563 726 aaKnown RBP11.77□□□□□ -0.53
CPNE1-218ENST00000439806 MYL1P05976 194 aa11.77□□□□□ -0.53
CPNE1-218ENST00000439806 CRKP46108 304 aa11.77□□□□□ -0.53
CPNE1-218ENST00000439806 EIF6P56537 245 aaKnown RBP11.77□□□□□ -0.53
CPNE1-218ENST00000439806 GOLGA8FQ08AF8 430 aa11.77□□□□□ -0.53
CPNE1-218ENST00000439806 GOLGA8DPQ0D2H9 430 aa11.77□□□□□ -0.53
CPNE1-218ENST00000439806 STIM1Q13586 685 aa11.77□□□□□ -0.53
CPNE1-218ENST00000439806 NR1I3Q14994 352 aa11.77□□□□□ -0.53
CPNE1-218ENST00000439806 SYCP1Q15431 976 aa11.77□□□□□ -0.53
CPNE1-218ENST00000439806 PTPN21Q16825 1174 aa11.77□□□□□ -0.53
CPNE1-218ENST00000439806 CDKAL1Q5VV42 579 aa11.77□□□□□ -0.53
CPNE1-218ENST00000439806 JAKMIP3Q5VZ66 844 aa11.77□□□□□ -0.53
CPNE1-218ENST00000439806 MSL1Q68DK7 614 aa11.77□□□□□ -0.53
CPNE1-218ENST00000439806 ZNF772Q68DY9 489 aaPredicted RBP11.77□□□□□ -0.53
CPNE1-218ENST00000439806 PPP1R18Q6NYC8 613 aa11.77□□□□□ -0.53
CPNE1-218ENST00000439806 NELFBQ8WX92 580 aa11.77□□□□□ -0.53
CPNE1-218ENST00000439806 TSC1Q92574 1164 aa11.77□□□□□ -0.53
CPNE1-218ENST00000439806 AK8Q96MA6 479 aa11.77□□□□□ -0.53
CPNE1-218ENST00000439806 MED15Q96RN5 788 aa11.77□□□□□ -0.53
CPNE1-218ENST00000439806 TMX1Q9H3N1 280 aa11.77□□□□□ -0.53
CPNE1-218ENST00000439806 BIN2Q9UBW5 565 aaPredicted RBP11.77□□□□□ -0.53
CPNE1-218ENST00000439806 RWDD2AQ9UIY3 292 aa11.77□□□□□ -0.53
CPNE1-218ENST00000439806 SLX4Q8IY92 1834 aa11.76□□□□□ -0.53
CPNE1-218ENST00000439806 PP2D1A8MPX8 630 aa11.76□□□□□ -0.53
CPNE1-218ENST00000439806 AKR1B15C9JRZ8 316 aaPredicted RBP11.76□□□□□ -0.53
CPNE1-218ENST00000439806 H0YIN7 160 aa11.76□□□□□ -0.53
CPNE1-218ENST00000439806 TPM1P09493 284 aa11.76□□□□□ -0.53
CPNE1-218ENST00000439806 CDC25AP30304 524 aa11.76□□□□□ -0.53
CPNE1-218ENST00000439806 FKBP1AP62942 108 aaKnown RBP11.76□□□□□ -0.53
CPNE1-218ENST00000439806 ATP2B2Q01814 1243 aa11.76□□□□□ -0.53
CPNE1-218ENST00000439806 ZNF543Q08ER8 600 aa11.76□□□□□ -0.53
CPNE1-218ENST00000439806 SEMA3FQ13275 785 aa11.76□□□□□ -0.53
CPNE1-218ENST00000439806 KCNB1Q14721 858 aa11.76□□□□□ -0.53
CPNE1-218ENST00000439806 STYK1Q6J9G0 422 aa11.76□□□□□ -0.53
CPNE1-218ENST00000439806 PODNQ7Z5L7 613 aa11.76□□□□□ -0.53
CPNE1-218ENST00000439806 TBCKQ8TEA7 893 aa11.76□□□□□ -0.53
CPNE1-218ENST00000439806 CCDC17Q96LX7 622 aa11.76□□□□□ -0.53
CPNE1-218ENST00000439806 PLIN2Q99541 437 aa11.76□□□□□ -0.53
CPNE1-218ENST00000439806 BAG1Q99933 345 aaPredicted RBP11.76□□□□□ -0.53
CPNE1-218ENST00000439806 TRIM34Q9BYJ4 488 aa11.76□□□□□ -0.53
CPNE1-218ENST00000439806 EHD4Q9H223 541 aa11.76□□□□□ -0.53
CPNE1-218ENST00000439806 DBNDD1Q9H9R9 158 aa11.76□□□□□ -0.53
CPNE1-218ENST00000439806 TMEM260Q9NX78 707 aa11.76□□□□□ -0.53
CPNE1-218ENST00000439806 GOLGA6L9A6NEM1 432 aa11.75□□□□□ -0.53
CPNE1-218ENST00000439806 STX10O60499 249 aa11.75□□□□□ -0.53
CPNE1-218ENST00000439806 SNHG28P0DPA3 235 aa11.75□□□□□ -0.53
CPNE1-218ENST00000439806 SHMT1P34896 483 aa11.75□□□□□ -0.53
CPNE1-218ENST00000439806 RBM5P52756 815 aaKnown RBP eCLIP11.75□□□□□ -0.533e-6■■■□□ 15.4
CPNE1-218ENST00000439806 TMEM266Q2M3C6 531 aa11.75□□□□□ -0.53
CPNE1-218ENST00000439806 KMT5BQ4FZB7 885 aa11.75□□□□□ -0.53
CPNE1-218ENST00000439806 GPATCH4Q5T3I0 446 aaKnown RBP11.75□□□□□ -0.53
CPNE1-218ENST00000439806 SYT10Q6XYQ8 523 aa11.75□□□□□ -0.53
CPNE1-218ENST00000439806 CLEC10AQ8IUN9 316 aa11.75□□□□□ -0.53
CPNE1-218ENST00000439806 IGSF22Q8N9C0 903 aa11.75□□□□□ -0.53
CPNE1-218ENST00000439806 COA7Q96BR5 231 aa11.75□□□□□ -0.53
CPNE1-218ENST00000439806 CALML4Q96GE6 196 aa11.75□□□□□ -0.53
CPNE1-218ENST00000439806 MTRQ99707 1265 aa11.75□□□□□ -0.53
CPNE1-218ENST00000439806 LIMA1Q9UHB6 759 aaKnown RBP11.75□□□□□ -0.53
CPNE1-218ENST00000439806 GDAQ9Y2T3 454 aa11.75□□□□□ -0.53
CPNE1-218ENST00000439806 MYH7BA7E2Y1 1941 aa11.75□□□□□ -0.53
CPNE1-218ENST00000439806 SCN9AQ15858 1988 aa11.75□□□□□ -0.53
CPNE1-218ENST00000439806 PNMA6FA0A0J9YX94 578 aa11.74□□□□□ -0.53
CPNE1-218ENST00000439806 N4BP3O15049 544 aa11.74□□□□□ -0.53
CPNE1-218ENST00000439806 TEX33O43247 280 aa11.74□□□□□ -0.53
CPNE1-218ENST00000439806 ECE2O60344 883 aa11.74□□□□□ -0.53
CPNE1-218ENST00000439806 PLCG1P19174 1290 aa11.74□□□□□ -0.53
CPNE1-218ENST00000439806 PRCPP42785 496 aa11.74□□□□□ -0.53
CPNE1-218ENST00000439806 COPB1P53618 953 aaKnown RBP11.74□□□□□ -0.53
CPNE1-218ENST00000439806 ADKP55263 362 aaKnown RBP11.74□□□□□ -0.53
CPNE1-218ENST00000439806 HDLBPQ00341 1268 aaKnown RBP11.74□□□□□ -0.53
CPNE1-218ENST00000439806 AMPD3Q01432 767 aa11.74□□□□□ -0.53
CPNE1-218ENST00000439806 CALCRLQ16602 461 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms