RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 BRPF3Q9ULD4 1205 aa4.62□□□□□ -1.67
HMGB1P37-201ENST00000439613 ZNRF3Q9ULT6 936 aa4.62□□□□□ -1.67
HMGB1P37-201ENST00000439613 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.62□□□□□ -1.67
HMGB1P37-201ENST00000439613 ZDHHC9Q9Y397 364 aa4.62□□□□□ -1.67
HMGB1P37-201ENST00000439613 ARFGEF1Q9Y6D6 1849 aa4.62□□□□□ -1.67
HMGB1P37-201ENST00000439613 NID2Q14112 1375 aa4.62□□□□□ -1.67
HMGB1P37-201ENST00000439613 ROBO3Q96MS0 1386 aa4.62□□□□□ -1.67
HMGB1P37-201ENST00000439613 ZNF646O15015 1829 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 CYP2D7A0A087X1C5 515 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 PTPDC1A2A3K4 754 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 VPS37CA5D8V6 355 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 CARNS1A5YM72 827 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 TSPY2A6NKD2 308 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 GOLGA8AA7E2F4 631 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 F8W031 263 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 ST8SIA5O15466 376 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 ENTPD3O75355 529 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 LGR5O75473 907 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 DDAH1O94760 285 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 F13A1P00488 732 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 HLA-DOAP06340 250 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 VIL1P09327 827 aaKnown RBP4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 RASA1P20936 1047 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 KIF5BP33176 963 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 IARSP41252 1262 aaKnown RBP4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 RBM5P52756 815 aaKnown RBP eCLIP4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 CLDN10P78369 228 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 CCT2P78371 535 aaKnown RBP4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 ST3GAL1Q11201 340 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 PKP1Q13835 747 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 COL9A3Q14050 684 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 SEC23AQ15436 765 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 RTN1Q16799 776 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 CRTC2Q53ET0 693 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 IFIT1BQ5T764 474 aaKnown RBP4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 ATL3Q6DD88 541 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 APOBEC3HQ6NTF7 200 aaKnown RBP4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 CDC42EP5Q6NZY7 148 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 C16orf86Q6ZW13 317 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 DGKHQ86XP1 1220 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 KIAA0825Q8IV33 1275 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 MAPKAPK5Q8IW41 473 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 TRIM22Q8IYM9 498 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 ENAHQ8N8S7 591 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 FANCBQ8NB91 859 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 NSUN7Q8NE18 718 aaKnown RBP4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 AGBL3Q8NEM8 1001 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 PBXIP1Q96AQ6 731 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 DDX11Q96FC9 970 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 MAP3K14Q99558 947 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 IDI2Q9BXS1 227 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 DHX36Q9H2U1 1008 aaKnown RBP4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 VRTNQ9H8Y1 702 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 SPON1Q9HCB6 807 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 NCOA5Q9HCD5 579 aaKnown RBP4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 INCENPQ9NQS7 918 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 RAB6BQ9NRW1 208 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 RBM28Q9NW13 759 aaKnown RBP4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 TMOD2Q9NZR1 351 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 PPP1R1BQ9UD71 204 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 SWAP70Q9UH65 585 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 KIAA1024Q9UPX6 916 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 MTMR6Q9Y217 621 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 NOD1Q9Y239 953 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 FLT1P17948 1338 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 LTBP3Q9NS15 1303 aa4.61□□□□□ -1.67
HMGB1P37-201ENST00000439613 DDX60LQ5H9U9 1706 aaKnown RBP4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 JAK2O60674 1132 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 WDHD1O75717 1129 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 UPP2O95045 317 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 CTDNEP1O95476 244 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 MBD3O95983 291 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 TSPY3P0CV98 308 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 TSPY8P0CW00 308 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 CYP2D6P10635 497 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 IFNAR1P17181 557 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 RPS12P25398 132 aaKnown RBP4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 CDK8P49336 464 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 GNAQP50148 359 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 SCNN1DP51172 638 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 TFAP4Q01664 338 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 AKAP17AQ02040 695 aaKnown RBP4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 SSRP1Q08945 709 aaKnown RBP4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 TRIM29Q14134 588 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 DLGAP5Q15398 846 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 FKBP1CQ5VVH2 108 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 MCTP1Q6DN14 999 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 MRPL14Q6P1L8 145 aaKnown RBP4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 FOXP4Q8IVH2 680 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 ZNF654Q8IZM8 581 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 FAM177A1Q8N128 213 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 MEIOBQ8N635 442 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 TMEM87AQ8NBN3 555 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 FBXO18Q8NFZ0 1043 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 NEDD1Q8NHV4 660 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 C8orf76Q96K31 380 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 CCDC17Q96LX7 622 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 ZNF396Q96N95 335 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 LZTS2Q9BRK4 669 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 ZKSCAN3Q9BRR0 538 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms