RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 AGBL1Q96MI9 1066 aa21.58■■□□□ 1.05
GTF3A-204ENST00000438571 IL17RBQ9NRM6 502 aa21.58■■□□□ 1.05
GTF3A-204ENST00000438571 SYNPO2Q9UMS6 1093 aa21.58■■□□□ 1.05
GTF3A-204ENST00000438571 CLTBP09497 229 aa21.57■■□□□ 1.04
GTF3A-204ENST00000438571 MCCP23508 829 aa21.57■■□□□ 1.04
GTF3A-204ENST00000438571 STAT2P52630 851 aa21.57■■□□□ 1.04
GTF3A-204ENST00000438571 EPHB4P54760 987 aa21.57■■□□□ 1.04
GTF3A-204ENST00000438571 CCSAPQ6IQ19 270 aaPredicted RBP21.57■■□□□ 1.04
GTF3A-204ENST00000438571 KCTD1Q719H9 257 aa21.57■■□□□ 1.04
GTF3A-204ENST00000438571 ZNF467Q7Z7K2 595 aaPredicted RBP21.57■■□□□ 1.04
GTF3A-204ENST00000438571 KLHDC9Q8NEP7 349 aa21.57■■□□□ 1.04
GTF3A-204ENST00000438571 KATNBL1Q9H079 304 aa21.57■■□□□ 1.04
GTF3A-204ENST00000438571 FAM184BQ9ULE4 1060 aa21.57■■□□□ 1.04
GTF3A-204ENST00000438571 UNC80Q8N2C7 3258 aa21.57■■□□□ 1.04
GTF3A-204ENST00000438571 PTGS1P23219 599 aa21.56■■□□□ 1.04
GTF3A-204ENST00000438571 ACLYP53396 1101 aa21.56■■□□□ 1.04
GTF3A-204ENST00000438571 OAZ1P54368 228 aa21.56■■□□□ 1.04
GTF3A-204ENST00000438571 ACVR2BQ13705 512 aa21.56■■□□□ 1.04
GTF3A-204ENST00000438571 ARMCX2Q7L311 632 aa21.56■■□□□ 1.04
GTF3A-204ENST00000438571 CHST13Q8NET6 341 aa21.56■■□□□ 1.04
GTF3A-204ENST00000438571 A1CFQ9NQ94 594 aaKnown RBP21.56■■□□□ 1.04
GTF3A-204ENST00000438571 STX8Q9UNK0 236 aa21.56■■□□□ 1.04
GTF3A-204ENST00000438571 MTMR7Q9Y216 660 aa21.56■■□□□ 1.04
GTF3A-204ENST00000438571 ASTN1O14525 1302 aa21.55■■□□□ 1.04
GTF3A-204ENST00000438571 A0A0D9SFI3 127 aa21.55■■□□□ 1.04
GTF3A-204ENST00000438571 TSPY2A6NKD2 308 aa21.55■■□□□ 1.04
GTF3A-204ENST00000438571 SLC3A2P08195 630 aaKnown RBP21.55■■□□□ 1.04
GTF3A-204ENST00000438571 SLC1A4P43007 532 aa21.55■■□□□ 1.04
GTF3A-204ENST00000438571 IKQ13123 557 aaPredicted RBP21.55■■□□□ 1.04
GTF3A-204ENST00000438571 KCNA10Q16322 511 aa21.55■■□□□ 1.04
GTF3A-204ENST00000438571 CCDC174Q6PII3 467 aa21.55■■□□□ 1.04
GTF3A-204ENST00000438571 CCDC144CPQ8IYA2 1237 aa21.55■■□□□ 1.04
GTF3A-204ENST00000438571 GMCL1Q96IK5 515 aa21.55■■□□□ 1.04
GTF3A-204ENST00000438571 FAM227BQ96M60 508 aa21.55■■□□□ 1.04
GTF3A-204ENST00000438571 STARD7Q9NQZ5 370 aa21.55■■□□□ 1.04
GTF3A-204ENST00000438571 RNF146Q9NTX7 359 aa21.55■■□□□ 1.04
GTF3A-204ENST00000438571 FBXO40Q9UH90 709 aa21.55■■□□□ 1.04
GTF3A-204ENST00000438571 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.54■■□□□ 1.04
GTF3A-204ENST00000438571 SOWAHBA6NEL2 793 aa21.54■■□□□ 1.04
GTF3A-204ENST00000438571 DUSP11O75319 330 aaKnown RBP21.54■■□□□ 1.04
GTF3A-204ENST00000438571 PDE1AP54750 535 aa21.54■■□□□ 1.04
GTF3A-204ENST00000438571 CCDC144BQ3MJ40 725 aa21.54■■□□□ 1.04
GTF3A-204ENST00000438571 FAM133AQ8N9E0 248 aa21.54■■□□□ 1.04
GTF3A-204ENST00000438571 STAG1Q8WVM7 1258 aa21.54■■□□□ 1.04
GTF3A-204ENST00000438571 ACAD9Q9H845 621 aa21.54■■□□□ 1.04
GTF3A-204ENST00000438571 DLL1O00548 723 aa21.53■■□□□ 1.04
GTF3A-204ENST00000438571 KIAA0355O15063 1070 aa21.53■■□□□ 1.04
GTF3A-204ENST00000438571 C6orf222P0C671 652 aaPredicted RBP21.53■■□□□ 1.04
GTF3A-204ENST00000438571 FAAP100Q0VG06 881 aa21.53■■□□□ 1.04
GTF3A-204ENST00000438571 MUM1L1Q5H9M0 696 aa21.53■■□□□ 1.04
GTF3A-204ENST00000438571 FAM109BQ6ICB4 259 aaPredicted RBP21.53■■□□□ 1.04
GTF3A-204ENST00000438571 FAM160B2Q86V87 743 aa21.53■■□□□ 1.04
GTF3A-204ENST00000438571 EVI5LQ96CN4 794 aa21.53■■□□□ 1.04
GTF3A-204ENST00000438571 TSEN34Q9BSV6 310 aaKnown RBP21.53■■□□□ 1.04
GTF3A-204ENST00000438571 PRR12Q9ULL5 1215 aa21.53■■□□□ 1.04
GTF3A-204ENST00000438571 MOXD2PA6NHM9 499 aa21.52■■□□□ 1.04
GTF3A-204ENST00000438571 CTAGE5O15320 804 aa21.52■■□□□ 1.04
GTF3A-204ENST00000438571 RANBP6O60518 1105 aaKnown RBP21.52■■□□□ 1.04
GTF3A-204ENST00000438571 ALAS1P13196 640 aa21.52■■□□□ 1.04
GTF3A-204ENST00000438571 RAG1P15918 1043 aa21.52■■□□□ 1.04
GTF3A-204ENST00000438571 CST5P28325 142 aaPredicted RBP21.52■■□□□ 1.04
GTF3A-204ENST00000438571 ZNF697Q5TEC3 545 aa21.52■■□□□ 1.04
GTF3A-204ENST00000438571 ZNF589Q86UQ0 364 aaPredicted RBP21.52■■□□□ 1.04
GTF3A-204ENST00000438571 UPF3AQ9H1J1 476 aaKnown RBP21.52■■□□□ 1.04
GTF3A-204ENST00000438571 ABHD16BQ9H3Z7 469 aa21.52■■□□□ 1.04
GTF3A-204ENST00000438571 ANAPC4Q9UJX5 808 aa21.52■■□□□ 1.04
GTF3A-204ENST00000438571 ASGR1P07306 291 aa21.51■■□□□ 1.03
GTF3A-204ENST00000438571 NOVP48745 357 aa21.51■■□□□ 1.03
GTF3A-204ENST00000438571 TTBK2Q6IQ55 1244 aa21.51■■□□□ 1.03
GTF3A-204ENST00000438571 ANKRD33Q7Z3H0 272 aa21.51■■□□□ 1.03
GTF3A-204ENST00000438571 CHURC1Q8WUH1 139 aa21.51■■□□□ 1.03
GTF3A-204ENST00000438571 TRERF1Q96PN7 1200 aa21.51■■□□□ 1.03
GTF3A-204ENST00000438571 PURBQ96QR8 312 aaKnown RBP21.51■■□□□ 1.03
GTF3A-204ENST00000438571 TMEM39AQ9NV64 488 aa21.51■■□□□ 1.03
GTF3A-204ENST00000438571 MYO9BQ13459 2157 aa21.5■■□□□ 1.03
GTF3A-204ENST00000438571 GJA9P57773 515 aa21.5■■□□□ 1.03
GTF3A-204ENST00000438571 BEX3Q00994 111 aa21.5■■□□□ 1.03
GTF3A-204ENST00000438571 HDAC1Q13547 482 aaPredicted RBP21.5■■□□□ 1.03
GTF3A-204ENST00000438571 RRP12Q5JTH9 1297 aaKnown RBP21.5■■□□□ 1.03
GTF3A-204ENST00000438571 TMEM63BQ5T3F8 832 aa21.5■■□□□ 1.03
GTF3A-204ENST00000438571 RCSD1Q6JBY9 416 aa21.5■■□□□ 1.03
GTF3A-204ENST00000438571 LNPKQ9C0E8 428 aa21.5■■□□□ 1.03
GTF3A-204ENST00000438571 TTYH1Q9H313 450 aaPredicted RBP21.5■■□□□ 1.03
GTF3A-204ENST00000438571 HELLSQ9NRZ9 838 aa21.5■■□□□ 1.03
GTF3A-204ENST00000438571 SCN5AQ14524 2016 aa21.5■■□□□ 1.03
GTF3A-204ENST00000438571 ORC4O43929 436 aa21.49■■□□□ 1.03
GTF3A-204ENST00000438571 PLA2G6O60733 806 aa21.49■■□□□ 1.03
GTF3A-204ENST00000438571 FGAP02671 866 aa21.49■■□□□ 1.03
GTF3A-204ENST00000438571 FGRP09769 529 aa21.49■■□□□ 1.03
GTF3A-204ENST00000438571 FDX1P10109 184 aa21.49■■□□□ 1.03
GTF3A-204ENST00000438571 SLC16A2P36021 539 aa21.49■■□□□ 1.03
GTF3A-204ENST00000438571 HAND2P61296 217 aa21.49■■□□□ 1.03
GTF3A-204ENST00000438571 NMIQ13287 307 aaPredicted RBP21.49■■□□□ 1.03
GTF3A-204ENST00000438571 CCDC96Q2M329 555 aa21.49■■□□□ 1.03
GTF3A-204ENST00000438571 NUP133Q8WUM0 1156 aa21.49■■□□□ 1.03
GTF3A-204ENST00000438571 RNPC3Q96LT9 517 aaKnown RBP21.49■■□□□ 1.03
GTF3A-204ENST00000438571 TOMM22Q9NS69 142 aa21.49■■□□□ 1.03
GTF3A-204ENST00000438571 ZBTB47Q9UFB7 747 aaPredicted RBP21.49■■□□□ 1.03
GTF3A-204ENST00000438571 TBX21Q9UL17 535 aa21.49■■□□□ 1.03
GTF3A-204ENST00000438571 FRMPD2Q68DX3 1309 aaPredicted RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms