RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 GINM1Q9NU53 330 aa13.92□□□□□ -0.18
RTN4-211ENST00000438462 GJB5O95377 273 aa13.91□□□□□ -0.18
RTN4-211ENST00000438462 ICAM3P32942 547 aa13.91□□□□□ -0.18
RTN4-211ENST00000438462 USP14P54578 494 aa13.91□□□□□ -0.18
RTN4-211ENST00000438462 PUM3Q15397 648 aaKnown RBP13.91□□□□□ -0.18
RTN4-211ENST00000438462 DCLK2Q8N568 766 aa13.91□□□□□ -0.18
RTN4-211ENST00000438462 DIS3Q9Y2L1 958 aaKnown RBP13.91□□□□□ -0.18
RTN4-211ENST00000438462 NLRC5Q86WI3 1866 aa13.91□□□□□ -0.18
RTN4-211ENST00000438462 NCK2O43639 380 aa13.9□□□□□ -0.18
RTN4-211ENST00000438462 SNAI1O95863 264 aaPredicted RBP13.9□□□□□ -0.18
RTN4-211ENST00000438462 FGFR2P21802 821 aa13.9□□□□□ -0.18
RTN4-211ENST00000438462 PSMC6P62333 389 aa13.9□□□□□ -0.18
RTN4-211ENST00000438462 SLF2Q8IX21 1173 aa13.9□□□□□ -0.18
RTN4-211ENST00000438462 C8orf58Q8NAV2 365 aa13.9□□□□□ -0.18
RTN4-211ENST00000438462 CYP2W1Q8TAV3 490 aa13.9□□□□□ -0.18
RTN4-211ENST00000438462 TRMT13Q9NUP7 481 aaKnown RBP13.9□□□□□ -0.18
RTN4-211ENST00000438462 PI4KBQ9UBF8 816 aa13.9□□□□□ -0.18
RTN4-211ENST00000438462 CABYRO75952 493 aa13.89□□□□□ -0.19
RTN4-211ENST00000438462 GH2P01242 217 aa13.89□□□□□ -0.19
RTN4-211ENST00000438462 CRACR2BQ8N4Y2 399 aaPredicted RBP13.89□□□□□ -0.19
RTN4-211ENST00000438462 DNAAF4Q8WXU2 420 aa13.89□□□□□ -0.19
RTN4-211ENST00000438462 FAM163AQ96GL9 167 aaPredicted RBP13.89□□□□□ -0.19
RTN4-211ENST00000438462 KIAA1683Q9H0B3 1180 aa13.89□□□□□ -0.19
RTN4-211ENST00000438462 SIL1Q9H173 461 aa13.89□□□□□ -0.19
RTN4-211ENST00000438462 ALDH8A1Q9H2A2 487 aaPredicted RBP13.89□□□□□ -0.19
RTN4-211ENST00000438462 SEMA4AQ9H3S1 761 aa13.89□□□□□ -0.19
RTN4-211ENST00000438462 MCM3APO60318 1980 aa13.89□□□□□ -0.19
RTN4-211ENST00000438462 PARP14Q460N5 1801 aa13.88□□□□□ -0.19
RTN4-211ENST00000438462 GPR75-ASB3A0A0A6YYF3 556 aa13.88□□□□□ -0.19
RTN4-211ENST00000438462 IQCF3P0C7M6 154 aa13.88□□□□□ -0.19
RTN4-211ENST00000438462 HYAL1Q12794 435 aa13.88□□□□□ -0.19
RTN4-211ENST00000438462 GPM6BQ13491 265 aa13.88□□□□□ -0.19
RTN4-211ENST00000438462 ANGPT1Q15389 498 aa13.88□□□□□ -0.19
RTN4-211ENST00000438462 EPC2Q52LR7 807 aa13.88□□□□□ -0.19
RTN4-211ENST00000438462 ASTLQ6HA08 431 aaPredicted RBP13.88□□□□□ -0.19
RTN4-211ENST00000438462 FAM117BQ6P1L5 589 aa13.88□□□□□ -0.19
RTN4-211ENST00000438462 RUBCNQ92622 972 aa13.88□□□□□ -0.19
RTN4-211ENST00000438462 RPGRIP1Q96KN7 1286 aa13.88□□□□□ -0.19
RTN4-211ENST00000438462 HAUS7Q99871 368 aa13.88□□□□□ -0.19
RTN4-211ENST00000438462 SEZ6LQ9BYH1 1024 aa13.88□□□□□ -0.19
RTN4-211ENST00000438462 TRIM34Q9BYJ4 488 aa13.88□□□□□ -0.19
RTN4-211ENST00000438462 DCDC2BA2VCK2 349 aa13.87□□□□□ -0.19
RTN4-211ENST00000438462 LINC01565O15544 149 aa13.87□□□□□ -0.19
RTN4-211ENST00000438462 COG2Q14746 738 aa13.87□□□□□ -0.19
RTN4-211ENST00000438462 CCDC144BQ3MJ40 725 aa13.87□□□□□ -0.19
RTN4-211ENST00000438462 ZBTB33Q86T24 672 aa13.87□□□□□ -0.19
RTN4-211ENST00000438462 CRIPAKQ8N1N5 446 aa13.87□□□□□ -0.19
RTN4-211ENST00000438462 MB21D1Q8N884 522 aa13.87□□□□□ -0.19
RTN4-211ENST00000438462 ACER1Q8TDN7 264 aa13.87□□□□□ -0.19
RTN4-211ENST00000438462 STK31Q9BXU1 1019 aa13.87□□□□□ -0.19
RTN4-211ENST00000438462 TANGO6Q9C0B7 1094 aa13.87□□□□□ -0.19
RTN4-211ENST00000438462 OTOGLQ3ZCN5 2332 aa13.87□□□□□ -0.19
RTN4-211ENST00000438462 CYSRT1A8MQ03 144 aa13.86□□□□□ -0.19
RTN4-211ENST00000438462 H3BNC9 293 aa13.86□□□□□ -0.19
RTN4-211ENST00000438462 EYA4O95677 639 aa13.86□□□□□ -0.19
RTN4-211ENST00000438462 SDHBP21912 280 aa13.86□□□□□ -0.19
RTN4-211ENST00000438462 GTF2F1P35269 517 aaKnown RBP eCLIP13.86□□□□□ -0.19
RTN4-211ENST00000438462 ACVR2BQ13705 512 aa13.86□□□□□ -0.19
RTN4-211ENST00000438462 ZGPATQ8N5A5 531 aaKnown RBP13.86□□□□□ -0.19
RTN4-211ENST00000438462 MSL3Q8N5Y2 521 aaKnown RBP13.86□□□□□ -0.19
RTN4-211ENST00000438462 INCENPQ9NQS7 918 aa13.86□□□□□ -0.19
RTN4-211ENST00000438462 HOXC10Q9NYD6 342 aa13.86□□□□□ -0.19
RTN4-211ENST00000438462 R4GN57 208 aa13.86□□□□□ -0.19
RTN4-211ENST00000438462 ASTN1O14525 1302 aa13.86□□□□□ -0.19
RTN4-211ENST00000438462 FRYQ5TBA9 3013 aa13.85□□□□□ -0.19
RTN4-211ENST00000438462 ZZEF1O43149 2961 aa13.85□□□□□ -0.19
RTN4-211ENST00000438462 MYO7AQ13402 2215 aa13.85□□□□□ -0.19
RTN4-211ENST00000438462 ZNF853P0CG23 659 aa13.85□□□□□ -0.19
RTN4-211ENST00000438462 NDUFV1P49821 464 aa13.85□□□□□ -0.19
RTN4-211ENST00000438462 NKX3-2P78367 333 aa13.85□□□□□ -0.19
RTN4-211ENST00000438462 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.85□□□□□ -0.194e-6■■□□□ 11.4
RTN4-211ENST00000438462 MSLNLQ96KJ4 702 aa13.85□□□□□ -0.19
RTN4-211ENST00000438462 ABCF2Q9UG63 623 aa13.85□□□□□ -0.19
RTN4-211ENST00000438462 CDV3Q9UKY7 258 aaKnown RBP13.85□□□□□ -0.19
RTN4-211ENST00000438462 DENND2AQ9ULE3 1009 aa13.85□□□□□ -0.19
RTN4-211ENST00000438462 FOCADQ5VW36 1801 aa13.85□□□□□ -0.19
RTN4-211ENST00000438462 PITPNM1O00562 1244 aa13.84□□□□□ -0.19
RTN4-211ENST00000438462 SLC25A27O95847 323 aa13.84□□□□□ -0.19
RTN4-211ENST00000438462 SUPT20HL2P0C7V6 817 aa13.84□□□□□ -0.19
RTN4-211ENST00000438462 RRP1P56182 461 aaKnown RBP13.84□□□□□ -0.19
RTN4-211ENST00000438462 FKBP5Q13451 457 aaPredicted RBP13.84□□□□□ -0.19
RTN4-211ENST00000438462 RAB3GAP1Q15042 981 aa13.84□□□□□ -0.19
RTN4-211ENST00000438462 METTL16Q86W50 562 aaKnown RBP13.84□□□□□ -0.19
RTN4-211ENST00000438462 TEX11Q8IYF3 940 aa13.84□□□□□ -0.19
RTN4-211ENST00000438462 TSPYL6Q8N831 410 aa13.84□□□□□ -0.19
RTN4-211ENST00000438462 SMRP1Q8NCR6 262 aa13.84□□□□□ -0.19
RTN4-211ENST00000438462 ATG4CQ96DT6 458 aa13.84□□□□□ -0.19
RTN4-211ENST00000438462 PHF7Q9BWX1 381 aaPredicted RBP13.84□□□□□ -0.19
RTN4-211ENST00000438462 CHMP4AQ9BY43 222 aa13.84□□□□□ -0.19
RTN4-211ENST00000438462 DHX36Q9H2U1 1008 aaKnown RBP13.84□□□□□ -0.19
RTN4-211ENST00000438462 IGFLR1Q9H665 355 aa13.84□□□□□ -0.19
RTN4-211ENST00000438462 MECOMQ03112 1051 aa13.83□□□□□ -0.2
RTN4-211ENST00000438462 FLIIQ13045 1269 aa13.83□□□□□ -0.2
RTN4-211ENST00000438462 CCDC146Q8IYE0 955 aa13.83□□□□□ -0.2
RTN4-211ENST00000438462 RETREG2Q8NC44 543 aa13.83□□□□□ -0.2
RTN4-211ENST00000438462 ZNF384Q8TF68 577 aa13.83□□□□□ -0.2
RTN4-211ENST00000438462 LPIN2Q92539 896 aa13.83□□□□□ -0.2
RTN4-211ENST00000438462 SAMD11Q96NU1 681 aa13.83□□□□□ -0.2
RTN4-211ENST00000438462 GNL3LQ9NVN8 582 aaKnown RBP13.83□□□□□ -0.2
RTN4-211ENST00000438462 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms