RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 ANKZF1Q9H8Y5 726 aa13.28□□□□□ -0.28
CD44-209ENST00000433892 ZCCHC17Q9NP64 241 aaKnown RBP13.28□□□□□ -0.28
CD44-209ENST00000433892 RGL2O15211 777 aa13.27□□□□□ -0.28
CD44-209ENST00000433892 BAG3O95817 575 aa13.27□□□□□ -0.28
CD44-209ENST00000433892 TMED8Q6PL24 325 aaPredicted RBP13.27□□□□□ -0.28
CD44-209ENST00000433892 MB21D1Q8N884 522 aa13.27□□□□□ -0.28
CD44-209ENST00000433892 TRIM47Q96LD4 638 aa13.27□□□□□ -0.28
CD44-209ENST00000433892 NAPGQ99747 312 aaPredicted RBP13.27□□□□□ -0.28
CD44-209ENST00000433892 KBTBD4Q9NVX7 518 aa13.27□□□□□ -0.28
CD44-209ENST00000433892 TRIM10Q9UDY6 481 aa13.27□□□□□ -0.28
CD44-209ENST00000433892 PALM3A6NDB9 673 aaPredicted RBP13.27□□□□□ -0.29
CD44-209ENST00000433892 LGALS16A8MUM7 142 aa13.27□□□□□ -0.29
CD44-209ENST00000433892 KLRF2D3W0D1 207 aa13.27□□□□□ -0.29
CD44-209ENST00000433892 RASA1P20936 1047 aa13.27□□□□□ -0.29
CD44-209ENST00000433892 SMC1AQ14683 1233 aaKnown RBP13.27□□□□□ -0.29
CD44-209ENST00000433892 KCNB1Q14721 858 aa13.27□□□□□ -0.29
CD44-209ENST00000433892 LONRF2Q1L5Z9 754 aa13.27□□□□□ -0.29
CD44-209ENST00000433892 DAGLBQ8NCG7 672 aa13.27□□□□□ -0.29
CD44-209ENST00000433892 ARHGEF1Q92888 912 aaKnown RBP13.27□□□□□ -0.29
CD44-209ENST00000433892 UBXN6Q9BZV1 441 aa13.27□□□□□ -0.29
CD44-209ENST00000433892 CCSER1Q9C0I3 900 aa13.27□□□□□ -0.29
CD44-209ENST00000433892 EPN1Q9Y6I3 576 aaPredicted RBP13.27□□□□□ -0.29
CD44-209ENST00000433892 ROBO3Q96MS0 1386 aa13.26□□□□□ -0.29
CD44-209ENST00000433892 MAST2Q6P0Q8 1798 aa13.26□□□□□ -0.29
CD44-209ENST00000433892 CCDC151A5D8V7 595 aa13.26□□□□□ -0.29
CD44-209ENST00000433892 PSMA7O14818 248 aa13.26□□□□□ -0.29
CD44-209ENST00000433892 CCNT1O60563 726 aaKnown RBP13.26□□□□□ -0.29
CD44-209ENST00000433892 RHOBTB3O94955 611 aa13.26□□□□□ -0.29
CD44-209ENST00000433892 NDUFA10O95299 355 aa13.26□□□□□ -0.29
CD44-209ENST00000433892 STIM1Q13586 685 aa13.26□□□□□ -0.29
CD44-209ENST00000433892 LETM2Q2VYF4 491 aa13.26□□□□□ -0.29
CD44-209ENST00000433892 RC3H1Q5TC82 1133 aaKnown RBP13.26□□□□□ -0.29
CD44-209ENST00000433892 JAKMIP3Q5VZ66 844 aa13.26□□□□□ -0.29
CD44-209ENST00000433892 GALNT17Q6IS24 598 aa13.26□□□□□ -0.29
CD44-209ENST00000433892 GIMAP8Q8ND71 665 aaPredicted RBP13.26□□□□□ -0.29
CD44-209ENST00000433892 OR8K1Q8NGG5 319 aa13.26□□□□□ -0.29
CD44-209ENST00000433892 PNKPQ96T60 521 aa13.26□□□□□ -0.29
CD44-209ENST00000433892 TCP11L1Q9NUJ3 509 aa13.26□□□□□ -0.29
CD44-209ENST00000433892 LUC7L2Q9Y383 392 aaKnown RBP13.26□□□□□ -0.29
CD44-209ENST00000433892 REXO2Q9Y3B8 237 aaKnown RBP13.26□□□□□ -0.29
CD44-209ENST00000433892 RTCBQ9Y3I0 505 aaKnown RBP13.26□□□□□ -0.29
CD44-209ENST00000433892 PLCG1P19174 1290 aa13.25□□□□□ -0.29
CD44-209ENST00000433892 EEF1GP26641 437 aaKnown RBP13.25□□□□□ -0.29
CD44-209ENST00000433892 OAS2P29728 719 aaKnown RBP13.25□□□□□ -0.29
CD44-209ENST00000433892 NAPAP54920 295 aa13.25□□□□□ -0.29
CD44-209ENST00000433892 GSTO1P78417 241 aa13.25□□□□□ -0.29
CD44-209ENST00000433892 TXNRD1Q16881 649 aa13.25□□□□□ -0.29
CD44-209ENST00000433892 CCDC178Q5BJE1 867 aa13.25□□□□□ -0.29
CD44-209ENST00000433892 ZNF507Q8TCN5 953 aa13.25□□□□□ -0.29
CD44-209ENST00000433892 GUCA1BQ9UMX6 200 aa13.25□□□□□ -0.29
CD44-209ENST00000433892 B4DLN1 442 aa13.25□□□□□ -0.29
CD44-209ENST00000433892 LAD1O00515 517 aa13.25□□□□□ -0.29
CD44-209ENST00000433892 RHOXF2BP0C7M4 288 aa13.25□□□□□ -0.29
CD44-209ENST00000433892 PPP4CP60510 307 aa13.25□□□□□ -0.29
CD44-209ENST00000433892 TUBB2AQ13885 445 aa13.25□□□□□ -0.29
CD44-209ENST00000433892 BRD3Q15059 726 aa13.25□□□□□ -0.29
CD44-209ENST00000433892 TTI2Q6NXR4 508 aa13.25□□□□□ -0.29
CD44-209ENST00000433892 USP17L2Q6R6M4 530 aa13.25□□□□□ -0.29
CD44-209ENST00000433892 CABP7Q86V35 215 aa13.25□□□□□ -0.29
CD44-209ENST00000433892 RHOXF2Q9BQY4 288 aa13.25□□□□□ -0.29
CD44-209ENST00000433892 TUBB2BQ9BVA1 445 aa13.25□□□□□ -0.29
CD44-209ENST00000433892 THAP9Q9H5L6 903 aa13.25□□□□□ -0.29
CD44-209ENST00000433892 VAT1LQ9HCJ6 419 aa13.25□□□□□ -0.29
CD44-209ENST00000433892 MAGEC2Q9UBF1 373 aaPredicted RBP13.25□□□□□ -0.29
CD44-209ENST00000433892 TFR2Q9UP52 801 aa13.25□□□□□ -0.29
CD44-209ENST00000433892 A0A1W2PQC6 194 aa13.24□□□□□ -0.29
CD44-209ENST00000433892 MYL1P05976 194 aa13.24□□□□□ -0.29
CD44-209ENST00000433892 CYP2C19P33261 490 aa13.24□□□□□ -0.29
CD44-209ENST00000433892 PRPHP41219 470 aa13.24□□□□□ -0.29
CD44-209ENST00000433892 FAM193AP78312 1265 aa13.24□□□□□ -0.29
CD44-209ENST00000433892 FAM182BQ5T319 152 aa13.24□□□□□ -0.29
CD44-209ENST00000433892 CSGALNACT2Q8N6G5 542 aa13.24□□□□□ -0.29
CD44-209ENST00000433892 ZBTB9Q96C00 473 aa13.24□□□□□ -0.29
CD44-209ENST00000433892 DNAJC7Q99615 494 aa13.24□□□□□ -0.29
CD44-209ENST00000433892 ZMYND12Q9H0C1 365 aa13.24□□□□□ -0.29
CD44-209ENST00000433892 MYO1AQ9UBC5 1043 aa13.24□□□□□ -0.29
CD44-209ENST00000433892 CCNL1Q9UK58 526 aaPredicted RBP13.24□□□□□ -0.29
CD44-209ENST00000433892 LEMD3Q9Y2U8 911 aa13.24□□□□□ -0.29
CD44-209ENST00000433892 FLT1P17948 1338 aa13.24□□□□□ -0.29
CD44-209ENST00000433892 SMCO2A6NFE2 343 aa13.24□□□□□ -0.29
CD44-209ENST00000433892 OR52Z1P0C646 297 aa13.24□□□□□ -0.29
CD44-209ENST00000433892 CDK8P49336 464 aa13.24□□□□□ -0.29
CD44-209ENST00000433892 NT5C2P49902 561 aa13.24□□□□□ -0.29
CD44-209ENST00000433892 PDE4DQ08499 809 aa13.24□□□□□ -0.29
CD44-209ENST00000433892 GRAPQ13588 217 aa13.24□□□□□ -0.29
CD44-209ENST00000433892 TSR1Q2NL82 804 aaKnown RBP13.24□□□□□ -0.29
CD44-209ENST00000433892 NCAPH2Q6IBW4 605 aa13.24□□□□□ -0.29
CD44-209ENST00000433892 WDR59Q6PJI9 974 aa13.24□□□□□ -0.29
CD44-209ENST00000433892 GRAPLQ8TC17 118 aaPredicted RBP13.24□□□□□ -0.29
CD44-209ENST00000433892 EYA3Q99504 573 aa13.24□□□□□ -0.29
CD44-209ENST00000433892 DUSP9Q99956 384 aaKnown RBP13.24□□□□□ -0.29
CD44-209ENST00000433892 TUBGCP2Q9BSJ2 902 aa13.24□□□□□ -0.29
CD44-209ENST00000433892 RTFDC1Q9BY42 306 aaPredicted RBP13.24□□□□□ -0.29
CD44-209ENST00000433892 TRIM9Q9C026 710 aa13.24□□□□□ -0.29
CD44-209ENST00000433892 MYO6Q9UM54 1294 aa13.24□□□□□ -0.29
CD44-209ENST00000433892 CAPN11Q9UMQ6 739 aa13.24□□□□□ -0.29
CD44-209ENST00000433892 ZNF831Q5JPB2 1677 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 CTAGE15A4D2H0 777 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 CTAGE8P0CG41 777 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 TECP42680 631 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms