RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 CHD1LQ86WJ1 897 aa20.26■□□□□ 0.83
CPSF4-203ENST00000430038 RILPL2Q969X0 211 aa20.26■□□□□ 0.83
CPSF4-203ENST00000430038 TRIM43Q96BQ3 446 aaPredicted RBP20.26■□□□□ 0.83
CPSF4-203ENST00000430038 KATNBL1Q9H079 304 aa20.26■□□□□ 0.83
CPSF4-203ENST00000430038 MTMR7Q9Y216 660 aa20.26■□□□□ 0.83
CPSF4-203ENST00000430038 ASTN1O14525 1302 aa20.26■□□□□ 0.83
CPSF4-203ENST00000430038 TRIM6-TRIM34B2RNG4 842 aa20.25■□□□□ 0.83
CPSF4-203ENST00000430038 PTGS1P23219 599 aa20.25■□□□□ 0.83
CPSF4-203ENST00000430038 ITGB8P26012 769 aa20.25■□□□□ 0.83
CPSF4-203ENST00000430038 STAT2P52630 851 aa20.25■□□□□ 0.83
CPSF4-203ENST00000430038 OAZ1P54368 228 aa20.25■□□□□ 0.83
CPSF4-203ENST00000430038 CCSAPQ6IQ19 270 aaPredicted RBP20.25■□□□□ 0.83
CPSF4-203ENST00000430038 ANKRD35Q8N283 1001 aa20.25■□□□□ 0.83
CPSF4-203ENST00000430038 CHST13Q8NET6 341 aa20.25■□□□□ 0.83
CPSF4-203ENST00000430038 RWDD1Q9H446 243 aaPredicted RBP20.25■□□□□ 0.83
CPSF4-203ENST00000430038 PRR12Q9ULL5 1215 aa20.25■□□□□ 0.83
CPSF4-203ENST00000430038 SYNGAP1Q96PV0 1343 aa20.25■□□□□ 0.83
CPSF4-203ENST00000430038 SOWAHBA6NEL2 793 aa20.24■□□□□ 0.83
CPSF4-203ENST00000430038 AKR1A1P14550 325 aa20.24■□□□□ 0.83
CPSF4-203ENST00000430038 SDSP20132 328 aa20.24■□□□□ 0.83
CPSF4-203ENST00000430038 MUM1L1Q5H9M0 696 aa20.24■□□□□ 0.83
CPSF4-203ENST00000430038 ZNF467Q7Z7K2 595 aaPredicted RBP20.24■□□□□ 0.83
CPSF4-203ENST00000430038 TBC1D10CQ8IV04 446 aa20.24■□□□□ 0.83
CPSF4-203ENST00000430038 FAM133AQ8N9E0 248 aa20.24■□□□□ 0.83
CPSF4-203ENST00000430038 KLHDC9Q8NEP7 349 aa20.24■□□□□ 0.83
CPSF4-203ENST00000430038 PURBQ96QR8 312 aaKnown RBP20.24■□□□□ 0.83
CPSF4-203ENST00000430038 TMEM47Q9BQJ4 181 aa20.24■□□□□ 0.83
CPSF4-203ENST00000430038 OSBPL3Q9H4L5 887 aa20.24■□□□□ 0.83
CPSF4-203ENST00000430038 A1CFQ9NQ94 594 aaKnown RBP20.24■□□□□ 0.83
CPSF4-203ENST00000430038 PDLIM7Q9NR12 457 aa20.24■□□□□ 0.83
CPSF4-203ENST00000430038 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.24■□□□□ 0.83
CPSF4-203ENST00000430038 ISY1Q9ULR0 285 aaKnown RBP20.24■□□□□ 0.83
CPSF4-203ENST00000430038 SYNRGQ9UMZ2 1314 aa20.24■□□□□ 0.83
CPSF4-203ENST00000430038 PLA2G6O60733 806 aa20.23■□□□□ 0.83
CPSF4-203ENST00000430038 SLC16A2P36021 539 aa20.23■□□□□ 0.83
CPSF4-203ENST00000430038 TLE2Q04725 743 aa20.23■□□□□ 0.83
CPSF4-203ENST00000430038 ACVR2BQ13705 512 aa20.23■□□□□ 0.83
CPSF4-203ENST00000430038 RRP12Q5JTH9 1297 aaKnown RBP20.23■□□□□ 0.83
CPSF4-203ENST00000430038 C1orf53Q5VUE5 145 aa20.23■□□□□ 0.83
CPSF4-203ENST00000430038 CCDC174Q6PII3 467 aa20.23■□□□□ 0.83
CPSF4-203ENST00000430038 FAM160B2Q86V87 743 aa20.23■□□□□ 0.83
CPSF4-203ENST00000430038 CCDC144CPQ8IYA2 1237 aa20.23■□□□□ 0.83
CPSF4-203ENST00000430038 MSL3Q8N5Y2 521 aaKnown RBP20.23■□□□□ 0.83
CPSF4-203ENST00000430038 CHURC1Q8WUH1 139 aa20.23■□□□□ 0.83
CPSF4-203ENST00000430038 ZHX1Q9UKY1 873 aaPredicted RBP20.23■□□□□ 0.83
CPSF4-203ENST00000430038 CNPY2Q9Y2B0 182 aa20.23■□□□□ 0.83
CPSF4-203ENST00000430038 CTDP1Q9Y5B0 961 aaPredicted RBP20.23■□□□□ 0.83
CPSF4-203ENST00000430038 CCDC171Q6TFL3 1326 aa20.23■□□□□ 0.83
CPSF4-203ENST00000430038 A0A1W2PQ45 241 aaPredicted RBP20.22■□□□□ 0.83
CPSF4-203ENST00000430038 A0A1W2PQY0 241 aa20.22■□□□□ 0.83
CPSF4-203ENST00000430038 CTAGE5O15320 804 aa20.22■□□□□ 0.83
CPSF4-203ENST00000430038 AAMPQ13685 434 aa20.22■□□□□ 0.83
CPSF4-203ENST00000430038 TMEM63BQ5T3F8 832 aa20.22■□□□□ 0.83
CPSF4-203ENST00000430038 ARMCX2Q7L311 632 aa20.22■□□□□ 0.83
CPSF4-203ENST00000430038 TRERF1Q96PN7 1200 aa20.22■□□□□ 0.83
CPSF4-203ENST00000430038 IL25Q9H293 177 aa20.22■□□□□ 0.83
CPSF4-203ENST00000430038 RNF146Q9NTX7 359 aa20.22■□□□□ 0.83
CPSF4-203ENST00000430038 FAM184BQ9ULE4 1060 aa20.22■□□□□ 0.83
CPSF4-203ENST00000430038 LRRC37A2A6NM11 1700 aa20.22■□□□□ 0.83
CPSF4-203ENST00000430038 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.21■□□□□ 0.83
CPSF4-203ENST00000430038 ALAS1P13196 640 aa20.21■□□□□ 0.83
CPSF4-203ENST00000430038 IKQ13123 557 aaPredicted RBP20.21■□□□□ 0.83
CPSF4-203ENST00000430038 KCNA10Q16322 511 aa20.21■□□□□ 0.83
CPSF4-203ENST00000430038 CCDC144BQ3MJ40 725 aa20.21■□□□□ 0.83
CPSF4-203ENST00000430038 C9orf50Q5SZB4 431 aa20.21■□□□□ 0.83
CPSF4-203ENST00000430038 RNF180Q86T96 592 aa20.21■□□□□ 0.83
CPSF4-203ENST00000430038 BADQ92934 168 aa20.21■□□□□ 0.83
CPSF4-203ENST00000430038 ACAD9Q9H845 621 aa20.21■□□□□ 0.83
CPSF4-203ENST00000430038 PRDM5Q9NQX1 630 aaPredicted RBP20.21■□□□□ 0.83
CPSF4-203ENST00000430038 TOMM22Q9NS69 142 aa20.21■□□□□ 0.83
CPSF4-203ENST00000430038 TCP11L1Q9NUJ3 509 aa20.21■□□□□ 0.83
CPSF4-203ENST00000430038 FBXO40Q9UH90 709 aa20.21■□□□□ 0.83
CPSF4-203ENST00000430038 ZMYM6O95789 1325 aa20.21■□□□□ 0.83
CPSF4-203ENST00000430038 LAMA4Q16363 1823 aa20.2■□□□□ 0.82
CPSF4-203ENST00000430038 FDX1P10109 184 aa20.2■□□□□ 0.82
CPSF4-203ENST00000430038 ACLYP53396 1101 aa20.2■□□□□ 0.82
CPSF4-203ENST00000430038 TICAM2Q86XR7 235 aa20.2■□□□□ 0.82
CPSF4-203ENST00000430038 SUPT16HQ9Y5B9 1047 aaKnown RBP20.2■□□□□ 0.82
CPSF4-203ENST00000430038 NEDD4P46934 1319 aa20.2■□□□□ 0.82
CPSF4-203ENST00000430038 FRMPD2Q68DX3 1309 aaPredicted RBP20.2■□□□□ 0.82
CPSF4-203ENST00000430038 DUSP11O75319 330 aaKnown RBP20.19■□□□□ 0.82
CPSF4-203ENST00000430038 PDE4AP27815 886 aa20.19■□□□□ 0.82
CPSF4-203ENST00000430038 EPHB4P54760 987 aa20.19■□□□□ 0.82
CPSF4-203ENST00000430038 SHHQ15465 462 aa20.19■□□□□ 0.82
CPSF4-203ENST00000430038 AKNAD1Q5T1N1 836 aa20.19■□□□□ 0.82
CPSF4-203ENST00000430038 BTNL9Q6UXG8 535 aa20.19■□□□□ 0.82
CPSF4-203ENST00000430038 DEFB123Q8N688 67 aa20.19■□□□□ 0.82
CPSF4-203ENST00000430038 ABHD16BQ9H3Z7 469 aa20.19■□□□□ 0.82
CPSF4-203ENST00000430038 GPCPD1Q9NPB8 672 aa20.19■□□□□ 0.82
CPSF4-203ENST00000430038 POTEB2H3BUK9 544 aa20.18■□□□□ 0.82
CPSF4-203ENST00000430038 TOP1P11387 765 aaKnown RBP20.18■□□□□ 0.82
CPSF4-203ENST00000430038 CCDC96Q2M329 555 aa20.18■□□□□ 0.82
CPSF4-203ENST00000430038 CWC27Q6UX04 472 aaKnown RBP20.18■□□□□ 0.82
CPSF4-203ENST00000430038 DCAF4Q8WV16 495 aa20.18■□□□□ 0.82
CPSF4-203ENST00000430038 LBHD1Q9BQE6 289 aaPredicted RBP20.18■□□□□ 0.82
CPSF4-203ENST00000430038 ZKSCAN3Q9BRR0 538 aa20.18■□□□□ 0.82
CPSF4-203ENST00000430038 UPF3AQ9H1J1 476 aaKnown RBP20.18■□□□□ 0.82
CPSF4-203ENST00000430038 RANBP17Q9H2T7 1088 aaKnown RBP20.18■□□□□ 0.82
CPSF4-203ENST00000430038 PDGFCQ9NRA1 345 aa20.18■□□□□ 0.82
CPSF4-203ENST00000430038 CYP39A1Q9NYL5 469 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms