RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 DUSP15Q9H1R2 295 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P9-201ENST00000429856 SIRT5Q9NXA8 310 aa4.54□□□□□ -1.68
HMGB1P9-201ENST00000429856 SUCOQ9UBS9 1254 aaKnown RBP4.54□□□□□ -1.68
HMGB1P9-201ENST00000429856 OR14I1A6ND48 311 aa4.53□□□□□ -1.68
HMGB1P9-201ENST00000429856 SSBP05455 408 aaKnown RBP eCLIP4.53□□□□□ -1.68
HMGB1P9-201ENST00000429856 PI3P19957 117 aa4.53□□□□□ -1.68
HMGB1P9-201ENST00000429856 PMS1P54277 932 aaKnown RBP4.53□□□□□ -1.68
HMGB1P9-201ENST00000429856 CLEC16AQ2KHT3 1053 aa4.53□□□□□ -1.68
HMGB1P9-201ENST00000429856 GAB4Q2WGN9 574 aa4.53□□□□□ -1.68
HMGB1P9-201ENST00000429856 FEZF2Q8TBJ5 459 aa4.53□□□□□ -1.68
HMGB1P9-201ENST00000429856 PANK1Q8TE04 598 aa4.53□□□□□ -1.68
HMGB1P9-201ENST00000429856 SHDQ96IW2 340 aa4.53□□□□□ -1.68
HMGB1P9-201ENST00000429856 TEPSINQ96N21 525 aa4.53□□□□□ -1.68
HMGB1P9-201ENST00000429856 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.53□□□□□ -1.68
HMGB1P9-201ENST00000429856 MKRN2Q9H000 416 aaKnown RBP4.53□□□□□ -1.68
HMGB1P9-201ENST00000429856 PRR13Q9NZ81 148 aa4.53□□□□□ -1.68
HMGB1P9-201ENST00000429856 PPP1R1BQ9UD71 204 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P9-201ENST00000429856 GPR160Q9UJ42 338 aa4.53□□□□□ -1.68
HMGB1P9-201ENST00000429856 ADAMTS20P59510 1910 aa4.52□□□□□ -1.69
HMGB1P9-201ENST00000429856 WASH4PA8MWX3 477 aa4.52□□□□□ -1.69
HMGB1P9-201ENST00000429856 LRRN2O75325 713 aa4.52□□□□□ -1.69
HMGB1P9-201ENST00000429856 ACRP10323 421 aa4.52□□□□□ -1.69
HMGB1P9-201ENST00000429856 INSRRP14616 1297 aa4.52□□□□□ -1.69
HMGB1P9-201ENST00000429856 LTKP29376 864 aa4.52□□□□□ -1.69
HMGB1P9-201ENST00000429856 CASP7P55210 303 aa4.52□□□□□ -1.69
HMGB1P9-201ENST00000429856 SRSF3P84103 164 aaKnown RBP4.52□□□□□ -1.69
HMGB1P9-201ENST00000429856 DUSP4Q13115 394 aa4.52□□□□□ -1.69
HMGB1P9-201ENST00000429856 NBPF9Q3BBW0 867 aa4.52□□□□□ -1.69
HMGB1P9-201ENST00000429856 TIGD5Q53EQ6 642 aa4.52□□□□□ -1.69
HMGB1P9-201ENST00000429856 TNNI3KQ59H18 835 aa4.52□□□□□ -1.69
HMGB1P9-201ENST00000429856 UNC5AQ6ZN44 842 aa4.52□□□□□ -1.69
HMGB1P9-201ENST00000429856 TSPYL5Q86VY4 417 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P9-201ENST00000429856 TMEM192Q8IY95 271 aa4.52□□□□□ -1.69
HMGB1P9-201ENST00000429856 PUS7Q96PZ0 661 aaKnown RBP4.52□□□□□ -1.69
HMGB1P9-201ENST00000429856 GMLQ99445 158 aa4.52□□□□□ -1.69
HMGB1P9-201ENST00000429856 GPR20Q99678 358 aa4.52□□□□□ -1.69
HMGB1P9-201ENST00000429856 PHAXQ9H814 394 aaKnown RBP4.52□□□□□ -1.69
HMGB1P9-201ENST00000429856 MYRFQ9Y2G1 1151 aa4.52□□□□□ -1.69
HMGB1P9-201ENST00000429856 PCDHB12Q9Y5F1 795 aa4.52□□□□□ -1.69
HMGB1P9-201ENST00000429856 ZC3H12DA2A288 527 aaKnown RBP4.51□□□□□ -1.69
HMGB1P9-201ENST00000429856 HRKO00198 91 aa4.51□□□□□ -1.69
HMGB1P9-201ENST00000429856 SMARCA5O60264 1052 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P9-201ENST00000429856 FGRP09769 529 aa4.51□□□□□ -1.69
HMGB1P9-201ENST00000429856 NMIQ13287 307 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P9-201ENST00000429856 PUM1Q14671 1186 aaKnown RBP eCLIP4.51□□□□□ -1.69
HMGB1P9-201ENST00000429856 RUFY4Q6ZNE9 571 aa4.51□□□□□ -1.69
HMGB1P9-201ENST00000429856 CCDC144CPQ8IYA2 1237 aa4.51□□□□□ -1.69
HMGB1P9-201ENST00000429856 ANKS4BQ8N8V4 417 aa4.51□□□□□ -1.69
HMGB1P9-201ENST00000429856 SYTL5Q8TDW5 730 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P9-201ENST00000429856 ANAPC16Q96DE5 110 aa4.51□□□□□ -1.69
HMGB1P9-201ENST00000429856 A0A1W2PQH9 124 aa4.5□□□□□ -1.69
HMGB1P9-201ENST00000429856 FAM86C2PA6NEL3 165 aa4.5□□□□□ -1.69
HMGB1P9-201ENST00000429856 DNAJA1P31689 397 aaKnown RBP4.5□□□□□ -1.69
HMGB1P9-201ENST00000429856 EFEMP1Q12805 493 aa4.5□□□□□ -1.69
HMGB1P9-201ENST00000429856 AUHQ13825 339 aaKnown RBP4.5□□□□□ -1.69
HMGB1P9-201ENST00000429856 ZYXQ15942 572 aaKnown RBP4.5□□□□□ -1.69
HMGB1P9-201ENST00000429856 PPP2R5EQ16537 467 aa4.5□□□□□ -1.69
HMGB1P9-201ENST00000429856 ANKRD39Q53RE8 183 aa4.5□□□□□ -1.69
HMGB1P9-201ENST00000429856 FRMD5Q7Z6J6 570 aa4.5□□□□□ -1.69
HMGB1P9-201ENST00000429856 ZNF655Q8N720 491 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P9-201ENST00000429856 DAGLBQ8NCG7 672 aa4.5□□□□□ -1.69
HMGB1P9-201ENST00000429856 UBXN4Q92575 508 aa4.5□□□□□ -1.69
HMGB1P9-201ENST00000429856 ZNF512BQ96KM6 892 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P9-201ENST00000429856 HDAC8Q9BY41 377 aa4.5□□□□□ -1.69
HMGB1P9-201ENST00000429856 LUC7LQ9NQ29 371 aaKnown RBP4.5□□□□□ -1.69
HMGB1P9-201ENST00000429856 MBD1Q9UIS9 605 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P9-201ENST00000429856 ZNF214Q9UL59 606 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P9-201ENST00000429856 PALD1Q9ULE6 856 aa4.5□□□□□ -1.69
HMGB1P9-201ENST00000429856 N4BP3O15049 544 aa4.49□□□□□ -1.69
HMGB1P9-201ENST00000429856 SIGLEC6O43699 453 aa4.49□□□□□ -1.69
HMGB1P9-201ENST00000429856 ENDOUP21128 410 aaKnown RBP4.49□□□□□ -1.69
HMGB1P9-201ENST00000429856 ADGRF1Q5T601 910 aa4.49□□□□□ -1.69
HMGB1P9-201ENST00000429856 OLFML2BQ68BL8 750 aa4.49□□□□□ -1.69
HMGB1P9-201ENST00000429856 CNKSR3Q6P9H4 555 aa4.49□□□□□ -1.69
HMGB1P9-201ENST00000429856 MCF2L2Q86YR7 1114 aa4.49□□□□□ -1.69
HMGB1P9-201ENST00000429856 C7orf61Q8IZ16 206 aa4.49□□□□□ -1.69
HMGB1P9-201ENST00000429856 PRDM14Q9GZV8 571 aa4.49□□□□□ -1.69
HMGB1P9-201ENST00000429856 CHST7Q9NS84 486 aa4.49□□□□□ -1.69
HMGB1P9-201ENST00000429856 PRKAG3Q9UGI9 489 aa4.49□□□□□ -1.69
HMGB1P9-201ENST00000429856 FBXL21Q9UKT6 434 aa4.49□□□□□ -1.69
HMGB1P9-201ENST00000429856 PCDHA11Q9Y5I1 949 aa4.49□□□□□ -1.69
HMGB1P9-201ENST00000429856 LTBP3Q9NS15 1303 aa4.48□□□□□ -1.69
HMGB1P9-201ENST00000429856 SHISA3A0PJX4 238 aa4.48□□□□□ -1.69
HMGB1P9-201ENST00000429856 C9IYK1 514 aa4.48□□□□□ -1.69
HMGB1P9-201ENST00000429856 SUV39H1O43463 412 aa4.48□□□□□ -1.69
HMGB1P9-201ENST00000429856 PRAMEF1O95521 474 aa4.48□□□□□ -1.69
HMGB1P9-201ENST00000429856 NAT2P11245 290 aa4.48□□□□□ -1.69
HMGB1P9-201ENST00000429856 HSP90B1P14625 803 aaKnown RBP4.48□□□□□ -1.69
HMGB1P9-201ENST00000429856 SLC7A5Q01650 507 aa4.48□□□□□ -1.69
HMGB1P9-201ENST00000429856 TCEAL1Q15170 157 aa4.48□□□□□ -1.69
HMGB1P9-201ENST00000429856 SF3A1Q15459 793 aaKnown RBP4.48□□□□□ -1.69
HMGB1P9-201ENST00000429856 VMACQ2NL98 169 aa4.48□□□□□ -1.69
HMGB1P9-201ENST00000429856 GNPTABQ3T906 1256 aa4.48□□□□□ -1.69
HMGB1P9-201ENST00000429856 TDRD10Q5VZ19 366 aaKnown RBP4.48□□□□□ -1.69
HMGB1P9-201ENST00000429856 GIMAP6Q6P9H5 292 aa4.48□□□□□ -1.69
HMGB1P9-201ENST00000429856 RNF111Q6ZNA4 994 aa4.48□□□□□ -1.69
HMGB1P9-201ENST00000429856 TMC3Q7Z5M5 1100 aa4.48□□□□□ -1.69
HMGB1P9-201ENST00000429856 PPFIBP1Q86W92 1011 aa4.48□□□□□ -1.69
HMGB1P9-201ENST00000429856 FAM169BQ8N8A8 192 aa4.48□□□□□ -1.69
HMGB1P9-201ENST00000429856 SHISA4Q96DD7 197 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms