RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 ZNF341Q9BYN7 854 aa17.88■□□□□ 0.45
TVP23C-203ENST00000428082 CABP5Q9NP86 173 aa17.88■□□□□ 0.45
TVP23C-203ENST00000428082 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.88■□□□□ 0.45
TVP23C-203ENST00000428082 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.87■□□□□ 0.45
TVP23C-203ENST00000428082 SMC2O95347 1197 aa17.87■□□□□ 0.45
TVP23C-203ENST00000428082 PRKG1Q13976 671 aa17.87■□□□□ 0.45
TVP23C-203ENST00000428082 ZNF654Q8IZM8 581 aa17.87■□□□□ 0.45
TVP23C-203ENST00000428082 CCDC34Q96HJ3 373 aa17.87■□□□□ 0.45
TVP23C-203ENST00000428082 ZBTB21Q9ULJ3 1066 aa17.87■□□□□ 0.45
TVP23C-203ENST00000428082 MORC2Q9Y6X9 1032 aaPredicted RBP17.87■□□□□ 0.45
TVP23C-203ENST00000428082 INPP5BP32019 993 aa17.86■□□□□ 0.45
TVP23C-203ENST00000428082 PTPN14Q15678 1187 aa17.86■□□□□ 0.45
TVP23C-203ENST00000428082 CEP135Q66GS9 1140 aa17.86■□□□□ 0.45
TVP23C-203ENST00000428082 CCDC112Q8NEF3 446 aa17.86■□□□□ 0.45
TVP23C-203ENST00000428082 ERCC4Q92889 916 aaPredicted RBP17.86■□□□□ 0.45
TVP23C-203ENST00000428082 KAT14Q9H8E8 782 aa17.86■□□□□ 0.45
TVP23C-203ENST00000428082 KCNH3Q9ULD8 1083 aa17.86■□□□□ 0.45
TVP23C-203ENST00000428082 TTLL1O95922 423 aa17.86■□□□□ 0.45
TVP23C-203ENST00000428082 CCZ1BP86790 482 aa17.86■□□□□ 0.45
TVP23C-203ENST00000428082 CCZ1P86791 482 aaPredicted RBP17.86■□□□□ 0.45
TVP23C-203ENST00000428082 MYL5Q02045 173 aa17.86■□□□□ 0.45
TVP23C-203ENST00000428082 KANK3Q6NY19 840 aa17.86■□□□□ 0.45
TVP23C-203ENST00000428082 KRBA2Q6ZNG9 492 aa17.86■□□□□ 0.45
TVP23C-203ENST00000428082 LDHDQ86WU2 507 aa17.86■□□□□ 0.45
TVP23C-203ENST00000428082 ZNF579Q8NAF0 562 aaKnown RBP17.86■□□□□ 0.45
TVP23C-203ENST00000428082 FANCBQ8NB91 859 aa17.86■□□□□ 0.45
TVP23C-203ENST00000428082 PNMA1Q8ND90 353 aa17.86■□□□□ 0.45
TVP23C-203ENST00000428082 CNNM3Q8NE01 707 aa17.86■□□□□ 0.45
TVP23C-203ENST00000428082 WRNIP1Q96S55 665 aa17.86■□□□□ 0.45
TVP23C-203ENST00000428082 KANSL2Q9H9L4 492 aa17.86■□□□□ 0.45
TVP23C-203ENST00000428082 DACH1Q9UI36 760 aa17.86■□□□□ 0.45
TVP23C-203ENST00000428082 ZNF112Q9UJU3 913 aa17.86■□□□□ 0.45
TVP23C-203ENST00000428082 CCP110O43303 1012 aa17.85■□□□□ 0.45
TVP23C-203ENST00000428082 ATP2B2Q01814 1243 aa17.85■□□□□ 0.45
TVP23C-203ENST00000428082 AKAP17AQ02040 695 aaKnown RBP17.85■□□□□ 0.45
TVP23C-203ENST00000428082 ICA1Q05084 483 aa17.85■□□□□ 0.45
TVP23C-203ENST00000428082 CATIPQ7Z7H3 387 aa17.85■□□□□ 0.45
TVP23C-203ENST00000428082 SIAH1Q8IUQ4 282 aa17.85■□□□□ 0.45
TVP23C-203ENST00000428082 DIS3L2Q8IYB7 885 aaKnown RBP17.85■□□□□ 0.45
TVP23C-203ENST00000428082 NUP133Q8WUM0 1156 aa17.85■□□□□ 0.45
TVP23C-203ENST00000428082 KLRG1Q96E93 195 aa17.85■□□□□ 0.45
TVP23C-203ENST00000428082 RNF26Q9BY78 433 aaPredicted RBP17.85■□□□□ 0.45
TVP23C-203ENST00000428082 XPO4Q9C0E2 1151 aaKnown RBP17.85■□□□□ 0.45
TVP23C-203ENST00000428082 IFNKQ9P0W0 207 aa17.85■□□□□ 0.45
TVP23C-203ENST00000428082 DOCK1Q14185 1865 aa17.84■□□□□ 0.45
TVP23C-203ENST00000428082 TRAF5O00463 557 aa17.84■□□□□ 0.45
TVP23C-203ENST00000428082 BIN1O00499 593 aa17.84■□□□□ 0.45
TVP23C-203ENST00000428082 CTNND1O60716 968 aaKnown RBP17.84■□□□□ 0.45
TVP23C-203ENST00000428082 USP2O75604 605 aaPredicted RBP17.84■□□□□ 0.45
TVP23C-203ENST00000428082 CALM1P0DP23 149 aa17.84■□□□□ 0.45
TVP23C-203ENST00000428082 CALM2P0DP24 149 aa17.84■□□□□ 0.45
TVP23C-203ENST00000428082 CALM3P0DP25 149 aa17.84■□□□□ 0.45
TVP23C-203ENST00000428082 TOP1P11387 765 aaKnown RBP17.84■□□□□ 0.45
TVP23C-203ENST00000428082 EEF2P13639 858 aaKnown RBP17.84■□□□□ 0.45
TVP23C-203ENST00000428082 SFPQP23246 707 aaKnown RBP eCLIP17.84■□□□□ 0.45
TVP23C-203ENST00000428082 FMR1Q06787 632 aaKnown RBP eCLIP17.84■□□□□ 0.45
TVP23C-203ENST00000428082 TROAPQ12815 778 aa17.84■□□□□ 0.45
TVP23C-203ENST00000428082 NCAPHQ15003 741 aa17.84■□□□□ 0.45
TVP23C-203ENST00000428082 NBPF11Q86T75 865 aa17.84■□□□□ 0.45
TVP23C-203ENST00000428082 ZKSCAN4Q969J2 545 aaPredicted RBP17.84■□□□□ 0.45
TVP23C-203ENST00000428082 CCDC94Q9BW85 323 aaPredicted RBP17.84■□□□□ 0.45
TVP23C-203ENST00000428082 A0A087WWV3 80 aa17.84■□□□□ 0.45
TVP23C-203ENST00000428082 ASNSP08243 561 aa17.84■□□□□ 0.45
TVP23C-203ENST00000428082 CCDC84Q86UT8 332 aaPredicted RBP17.84■□□□□ 0.45
TVP23C-203ENST00000428082 LRRC47Q8N1G4 583 aaKnown RBP17.84■□□□□ 0.45
TVP23C-203ENST00000428082 RBM28Q9NW13 759 aaKnown RBP17.84■□□□□ 0.45
TVP23C-203ENST00000428082 NYAP2Q9P242 653 aa17.84■□□□□ 0.45
TVP23C-203ENST00000428082 OTOFQ9HC10 1997 aa17.83■□□□□ 0.44
TVP23C-203ENST00000428082 BMP15O95972 392 aa17.83■□□□□ 0.44
TVP23C-203ENST00000428082 PTPREP23469 700 aa17.83■□□□□ 0.44
TVP23C-203ENST00000428082 FANCCQ00597 558 aa17.83■□□□□ 0.44
TVP23C-203ENST00000428082 NYAP1Q6ZVC0 841 aa17.83■□□□□ 0.44
TVP23C-203ENST00000428082 TMC6Q7Z403 805 aa17.83■□□□□ 0.44
TVP23C-203ENST00000428082 CCAR2Q8N163 923 aaKnown RBP17.83■□□□□ 0.44
TVP23C-203ENST00000428082 ANKRD7Q92527 254 aa17.83■□□□□ 0.44
TVP23C-203ENST00000428082 MTMR7Q9Y216 660 aa17.83■□□□□ 0.44
TVP23C-203ENST00000428082 PAPPA2Q9BXP8 1791 aa17.83■□□□□ 0.44
TVP23C-203ENST00000428082 BTBD18B2RXH4 712 aa17.82■□□□□ 0.44
TVP23C-203ENST00000428082 DDAH1O94760 285 aa17.82■□□□□ 0.44
TVP23C-203ENST00000428082 NF2P35240 595 aa17.82■□□□□ 0.44
TVP23C-203ENST00000428082 PPP4R3BQ5MIZ7 849 aa17.82■□□□□ 0.44
TVP23C-203ENST00000428082 RASGRP2Q7LDG7 609 aa17.82■□□□□ 0.44
TVP23C-203ENST00000428082 ZNF710Q8N1W2 664 aa17.82■□□□□ 0.44
TVP23C-203ENST00000428082 TRIML1Q8N9V2 468 aa17.82■□□□□ 0.44
TVP23C-203ENST00000428082 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.82■□□□□ 0.44
TVP23C-203ENST00000428082 A0A1W2PRG0 241 aa17.82■□□□□ 0.44
TVP23C-203ENST00000428082 PPP1R12BO60237 982 aaPredicted RBP17.82■□□□□ 0.44
TVP23C-203ENST00000428082 SCYL3Q8IZE3 742 aa17.82■□□□□ 0.44
TVP23C-203ENST00000428082 MKL1Q969V6 931 aa17.82■□□□□ 0.44
TVP23C-203ENST00000428082 GPBP1L1Q9HC44 474 aaPredicted RBP17.82■□□□□ 0.44
TVP23C-203ENST00000428082 ECE1P42892 770 aa17.81■□□□□ 0.44
TVP23C-203ENST00000428082 CT47A1Q5JQC4 288 aaPredicted RBP17.81■□□□□ 0.44
TVP23C-203ENST00000428082 MOB2Q70IA6 237 aa17.81■□□□□ 0.44
TVP23C-203ENST00000428082 KIF18AQ8NI77 898 aa17.81■□□□□ 0.44
TVP23C-203ENST00000428082 ACER1Q8TDN7 264 aa17.81■□□□□ 0.44
TVP23C-203ENST00000428082 BRMS1Q9HCU9 246 aa17.81■□□□□ 0.44
TVP23C-203ENST00000428082 SRPRBQ9Y5M8 271 aaKnown RBP17.81■□□□□ 0.44
TVP23C-203ENST00000428082 SERPINC1P01008 464 aa17.8■□□□□ 0.44
TVP23C-203ENST00000428082 PNOCQ13519 176 aa17.8■□□□□ 0.44
TVP23C-203ENST00000428082 ARID5BQ14865 1188 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms