RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 PNMA1Q8ND90 353 aa21.67■■□□□ 1.06
MSH5-207ENST00000425703 CHMP4CQ96CF2 233 aa21.67■■□□□ 1.06
MSH5-207ENST00000425703 ACAD9Q9H845 621 aa21.67■■□□□ 1.06
MSH5-207ENST00000425703 KAT14Q9H8E8 782 aa21.67■■□□□ 1.06
MSH5-207ENST00000425703 TNKSO95271 1327 aa21.66■■□□□ 1.06
MSH5-207ENST00000425703 ICAM1P05362 532 aa21.66■■□□□ 1.06
MSH5-207ENST00000425703 MNX1P50219 401 aaPredicted RBP21.66■■□□□ 1.06
MSH5-207ENST00000425703 TTBK2Q6IQ55 1244 aa21.66■■□□□ 1.06
MSH5-207ENST00000425703 ANKRD35Q8N283 1001 aa21.66■■□□□ 1.06
MSH5-207ENST00000425703 TRPV1Q8NER1 839 aa21.66■■□□□ 1.06
MSH5-207ENST00000425703 PAWRQ96IZ0 340 aaKnown RBP21.66■■□□□ 1.06
MSH5-207ENST00000425703 AGBL1Q96MI9 1066 aa21.66■■□□□ 1.06
MSH5-207ENST00000425703 ESYT1Q9BSJ8 1104 aa21.66■■□□□ 1.06
MSH5-207ENST00000425703 FRMPD2Q68DX3 1309 aaPredicted RBP21.65■■□□□ 1.06
MSH5-207ENST00000425703 SYNGAP1Q96PV0 1343 aa21.65■■□□□ 1.06
MSH5-207ENST00000425703 SEPT4O43236 478 aa21.65■■□□□ 1.06
MSH5-207ENST00000425703 SLC4A3P48751 1232 aa21.65■■□□□ 1.06
MSH5-207ENST00000425703 MAMDC4Q6UXC1 1216 aa21.65■■□□□ 1.06
MSH5-207ENST00000425703 GPCPD1Q9NPB8 672 aa21.65■■□□□ 1.06
MSH5-207ENST00000425703 RNF146Q9NTX7 359 aa21.65■■□□□ 1.06
MSH5-207ENST00000425703 CNGA1P29973 690 aa21.64■■□□□ 1.05
MSH5-207ENST00000425703 SLC16A2P36021 539 aa21.64■■□□□ 1.05
MSH5-207ENST00000425703 CCDC174Q6PII3 467 aa21.64■■□□□ 1.05
MSH5-207ENST00000425703 NCOA7Q8NI08 942 aa21.64■■□□□ 1.05
MSH5-207ENST00000425703 TRERF1Q96PN7 1200 aa21.64■■□□□ 1.05
MSH5-207ENST00000425703 LSG1Q9H089 658 aaKnown RBP21.64■■□□□ 1.05
MSH5-207ENST00000425703 HOMER2Q9NSB8 354 aa21.64■■□□□ 1.05
MSH5-207ENST00000425703 RBM8AQ9Y5S9 174 aaKnown RBP21.64■■□□□ 1.05
MSH5-207ENST00000425703 PFASO15067 1338 aa21.63■■□□□ 1.05
MSH5-207ENST00000425703 E7EWF7 191 aa21.63■■□□□ 1.05
MSH5-207ENST00000425703 SEC23AQ15436 765 aa21.63■■□□□ 1.05
MSH5-207ENST00000425703 ASPRV1Q53RT3 343 aa21.63■■□□□ 1.05
MSH5-207ENST00000425703 IFIT1BQ5T764 474 aaKnown RBP21.63■■□□□ 1.05
MSH5-207ENST00000425703 RALYLQ86SE5 291 aaKnown RBP21.63■■□□□ 1.05
MSH5-207ENST00000425703 SKAP1Q86WV1 359 aa21.63■■□□□ 1.05
MSH5-207ENST00000425703 DIS3LQ8TF46 1054 aaKnown RBP21.63■■□□□ 1.05
MSH5-207ENST00000425703 CCPG1Q9ULG6 757 aa21.63■■□□□ 1.05
MSH5-207ENST00000425703 WDR19Q8NEZ3 1342 aa21.62■■□□□ 1.05
MSH5-207ENST00000425703 ALAS1P13196 640 aa21.62■■□□□ 1.05
MSH5-207ENST00000425703 CASC1Q6TDU7 716 aa21.62■■□□□ 1.05
MSH5-207ENST00000425703 CYB5R4Q7L1T6 521 aa21.62■■□□□ 1.05
MSH5-207ENST00000425703 DPF3Q92784 378 aa21.62■■□□□ 1.05
MSH5-207ENST00000425703 C11orf49Q9H6J7 331 aa21.62■■□□□ 1.05
MSH5-207ENST00000425703 A1CFQ9NQ94 594 aaKnown RBP21.62■■□□□ 1.05
MSH5-207ENST00000425703 CNPY2Q9Y2B0 182 aa21.62■■□□□ 1.05
MSH5-207ENST00000425703 COL6A1P12109 1028 aa21.61■■□□□ 1.05
MSH5-207ENST00000425703 SNAP25P60880 206 aa21.61■■□□□ 1.05
MSH5-207ENST00000425703 SART3Q15020 963 aaKnown RBP21.61■■□□□ 1.05
MSH5-207ENST00000425703 PRAMEF19Q5SWL8 479 aa21.61■■□□□ 1.05
MSH5-207ENST00000425703 ERICH6BQ5W0A0 696 aa21.61■■□□□ 1.05
MSH5-207ENST00000425703 FAM133AQ8N9E0 248 aa21.61■■□□□ 1.05
MSH5-207ENST00000425703 ZNFX1Q9P2E3 1918 aaKnown RBP21.61■■□□□ 1.05
MSH5-207ENST00000425703 ERICH2A1L162 156 aa21.6■■□□□ 1.05
MSH5-207ENST00000425703 POTEB2H3BUK9 544 aa21.6■■□□□ 1.05
MSH5-207ENST00000425703 STOX1Q6ZVD7 989 aa21.6■■□□□ 1.05
MSH5-207ENST00000425703 ARRDC4Q8NCT1 418 aa21.6■■□□□ 1.05
MSH5-207ENST00000425703 FGD4Q96M96 766 aa21.6■■□□□ 1.05
MSH5-207ENST00000425703 MTA3Q9BTC8 594 aa21.6■■□□□ 1.05
MSH5-207ENST00000425703 NR2E3Q9Y5X4 410 aa21.6■■□□□ 1.05
MSH5-207ENST00000425703 TAF6LQ9Y6J9 622 aa21.6■■□□□ 1.05
MSH5-207ENST00000425703 DNM1LO00429 736 aa21.59■■□□□ 1.05
MSH5-207ENST00000425703 CDC45O75419 566 aa21.59■■□□□ 1.05
MSH5-207ENST00000425703 SNAI1O95863 264 aaPredicted RBP21.59■■□□□ 1.05
MSH5-207ENST00000425703 PARP1P09874 1014 aaKnown RBP21.59■■□□□ 1.05
MSH5-207ENST00000425703 ZNF865P0CJ78 1059 aaPredicted RBP21.59■■□□□ 1.05
MSH5-207ENST00000425703 GOLGA8HP0CJ92 632 aa21.59■■□□□ 1.05
MSH5-207ENST00000425703 MAF1Q9H063 256 aa21.59■■□□□ 1.05
MSH5-207ENST00000425703 ANO2Q9NQ90 1003 aa21.59■■□□□ 1.05
MSH5-207ENST00000425703 IFIT3O14879 490 aaKnown RBP21.58■■□□□ 1.05
MSH5-207ENST00000425703 AKR1A1P14550 325 aa21.58■■□□□ 1.05
MSH5-207ENST00000425703 NECTIN1Q15223 517 aa21.58■■□□□ 1.05
MSH5-207ENST00000425703 MUM1L1Q5H9M0 696 aa21.58■■□□□ 1.05
MSH5-207ENST00000425703 MB21D2Q8IYB1 491 aaPredicted RBP21.58■■□□□ 1.05
MSH5-207ENST00000425703 ABHD16BQ9H3Z7 469 aa21.58■■□□□ 1.05
MSH5-207ENST00000425703 CYP39A1Q9NYL5 469 aa21.58■■□□□ 1.05
MSH5-207ENST00000425703 EVI5O60447 810 aa21.57■■□□□ 1.04
MSH5-207ENST00000425703 RARBP10826 455 aa21.57■■□□□ 1.04
MSH5-207ENST00000425703 TAL1P17542 331 aaPredicted RBP21.57■■□□□ 1.04
MSH5-207ENST00000425703 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.57■■□□□ 1.04
MSH5-207ENST00000425703 CEP290O15078 2479 aa21.56■■□□□ 1.04
MSH5-207ENST00000425703 PLXNA1Q9UIW2 1896 aa21.56■■□□□ 1.04
MSH5-207ENST00000425703 LOC102724159A0A0B4J2E5 919 aa21.56■■□□□ 1.04
MSH5-207ENST00000425703 ASB14A6NK59 587 aa21.56■■□□□ 1.04
MSH5-207ENST00000425703 H0YGN5 161 aa21.56■■□□□ 1.04
MSH5-207ENST00000425703 SLC27A2O14975 620 aa21.56■■□□□ 1.04
MSH5-207ENST00000425703 CENPBP07199 599 aaPredicted RBP21.56■■□□□ 1.04
MSH5-207ENST00000425703 CNTN2Q02246 1040 aa21.56■■□□□ 1.04
MSH5-207ENST00000425703 PWP2Q15269 919 aaKnown RBP21.56■■□□□ 1.04
MSH5-207ENST00000425703 ARMCX2Q7L311 632 aa21.56■■□□□ 1.04
MSH5-207ENST00000425703 ADGRF4Q8IZF3 695 aa21.56■■□□□ 1.04
MSH5-207ENST00000425703 UBA5Q9GZZ9 404 aa21.56■■□□□ 1.04
MSH5-207ENST00000425703 SOWAHBA6NEL2 793 aa21.55■■□□□ 1.04
MSH5-207ENST00000425703 ANTXR2P58335 489 aa21.55■■□□□ 1.04
MSH5-207ENST00000425703 ACVR2BQ13705 512 aa21.55■■□□□ 1.04
MSH5-207ENST00000425703 WTAPQ15007 396 aa21.55■■□□□ 1.04
MSH5-207ENST00000425703 RNF20Q5VTR2 975 aa21.55■■□□□ 1.04
MSH5-207ENST00000425703 CREB3L3Q68CJ9 461 aa21.55■■□□□ 1.04
MSH5-207ENST00000425703 NSMFQ6X4W1 530 aa21.55■■□□□ 1.04
MSH5-207ENST00000425703 CCDC144CPQ8IYA2 1237 aa21.55■■□□□ 1.04
MSH5-207ENST00000425703 RGS22Q8NE09 1264 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms