RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 RARBP10826 455 aa15.09■□□□□ 0.01
SGCE-203ENST00000425444 PPIGQ13427 754 aaKnown RBP eCLIP15.09■□□□□ 0.01
SGCE-203ENST00000425444 PLS1Q14651 629 aa15.09■□□□□ 0.01
SGCE-203ENST00000425444 TMEM240Q5SV17 173 aa15.09■□□□□ 0.01
SGCE-203ENST00000425444 PLEKHM2Q8IWE5 1019 aa15.09■□□□□ 0.01
SGCE-203ENST00000425444 SNX27Q96L92 541 aa15.09■□□□□ 0.01
SGCE-203ENST00000425444 FAM227BQ96M60 508 aa15.09■□□□□ 0.01
SGCE-203ENST00000425444 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.09■□□□□ 0.01
SGCE-203ENST00000425444 SLC5A4Q9NY91 659 aa15.09■□□□□ 0.01
SGCE-203ENST00000425444 BRWD1Q9NSI6 2320 aa15.08■□□□□ 0
SGCE-203ENST00000425444 COBLO75128 1261 aa15.08■□□□□ 0
SGCE-203ENST00000425444 PGK1P00558 417 aa15.08■□□□□ 0
SGCE-203ENST00000425444 DSG3P32926 999 aa15.08■□□□□ 0
SGCE-203ENST00000425444 NMIQ13287 307 aaPredicted RBP15.08■□□□□ 0
SGCE-203ENST00000425444 RAB30Q15771 203 aa15.08■□□□□ 0
SGCE-203ENST00000425444 MCMDC2Q4G0Z9 681 aa15.08■□□□□ 0
SGCE-203ENST00000425444 VPS53Q5VIR6 699 aa15.08■□□□□ 0
SGCE-203ENST00000425444 MFSD5Q6N075 450 aa15.08■□□□□ 0
SGCE-203ENST00000425444 C16orf59Q7L2K0 433 aa15.08■□□□□ 0
SGCE-203ENST00000425444 ANKRD33Q7Z3H0 272 aa15.08■□□□□ 0
SGCE-203ENST00000425444 TICAM2Q86XR7 235 aa15.08■□□□□ 0
SGCE-203ENST00000425444 MB21D1Q8N884 522 aa15.08■□□□□ 0
SGCE-203ENST00000425444 ATG4CQ96DT6 458 aa15.08■□□□□ 0
SGCE-203ENST00000425444 TOX2Q96NM4 488 aa15.08■□□□□ 0
SGCE-203ENST00000425444 SPATC1LQ9H0A9 340 aa15.08■□□□□ 0
SGCE-203ENST00000425444 NKX2-4Q9H2Z4 354 aa15.08■□□□□ 0
SGCE-203ENST00000425444 OSBPL3Q9H4L5 887 aa15.08■□□□□ 0
SGCE-203ENST00000425444 SLC28A3Q9HAS3 691 aa15.08■□□□□ 0
SGCE-203ENST00000425444 GREB1LQ9C091 1923 aaPredicted RBP15.07■□□□□ 0
SGCE-203ENST00000425444 FAM86C2PA6NEL3 165 aa15.07■□□□□ 0
SGCE-203ENST00000425444 FAM83BQ5T0W9 1011 aa15.07■□□□□ 0
SGCE-203ENST00000425444 RASIP1Q5U651 963 aa15.07■□□□□ 0
SGCE-203ENST00000425444 CEP95Q96GE4 821 aa15.07■□□□□ 0
SGCE-203ENST00000425444 MOV10L1Q9BXT6 1211 aaKnown RBP15.07■□□□□ 0
SGCE-203ENST00000425444 NYAP2Q9P242 653 aa15.07■□□□□ 0
SGCE-203ENST00000425444 CLIP2Q9UDT6 1046 aa15.07■□□□□ 0
SGCE-203ENST00000425444 A0A0G2JMZ2 1700 aa15.06■□□□□ 0
SGCE-203ENST00000425444 TSPY2A6NKD2 308 aa15.06■□□□□ 0
SGCE-203ENST00000425444 FOXP2O15409 715 aa15.06■□□□□ 0
SGCE-203ENST00000425444 GPR37L1O60883 481 aa15.06■□□□□ 0
SGCE-203ENST00000425444 TTLL1O95922 423 aa15.06■□□□□ 0
SGCE-203ENST00000425444 ACRP10323 421 aa15.06■□□□□ 0
SGCE-203ENST00000425444 ERCC3P19447 782 aa15.06■□□□□ 0
SGCE-203ENST00000425444 MFAP1P55081 439 aaKnown RBP15.06■□□□□ 0
SGCE-203ENST00000425444 TFAP4Q01664 338 aa15.06■□□□□ 0
SGCE-203ENST00000425444 CTDSPL2Q05D32 466 aa15.06■□□□□ 0
SGCE-203ENST00000425444 ZNF365Q70YC5 407 aa15.06■□□□□ 0
SGCE-203ENST00000425444 ZNF589Q86UQ0 364 aaPredicted RBP15.06■□□□□ 0
SGCE-203ENST00000425444 STARD7Q9NQZ5 370 aa15.06■□□□□ 0
SGCE-203ENST00000425444 TOMM22Q9NS69 142 aa15.06■□□□□ 0
SGCE-203ENST00000425444 DIAPH3Q9NSV4 1193 aa15.06■□□□□ 0
SGCE-203ENST00000425444 FBXO28Q9NVF7 368 aa15.06■□□□□ 0
SGCE-203ENST00000425444 TBX21Q9UL17 535 aa15.06■□□□□ 0
SGCE-203ENST00000425444 ISY1Q9ULR0 285 aaKnown RBP15.06■□□□□ 0
SGCE-203ENST00000425444 CCDC171Q6TFL3 1326 aa15.06■□□□□ 0
SGCE-203ENST00000425444 PLIN4Q96Q06 1357 aa15.06■□□□□ 0
SGCE-203ENST00000425444 ZNF236Q9UL36 1845 aa15.06■□□□□ 0
SGCE-203ENST00000425444 IGKV6D-41A0A0C4DH26 115 aa15.05■□□□□ -0
SGCE-203ENST00000425444 F5H6K3 240 aa15.05■□□□□ -0
SGCE-203ENST00000425444 NDUFB10O96000 172 aa15.05■□□□□ -0
SGCE-203ENST00000425444 CSF2RAP15509 400 aa15.05■□□□□ -0
SGCE-203ENST00000425444 SDSP20132 328 aa15.05■□□□□ -0
SGCE-203ENST00000425444 KLRC3Q07444 240 aa15.05■□□□□ -0
SGCE-203ENST00000425444 PSRC1Q6PGN9 363 aaPredicted RBP15.05■□□□□ -0
SGCE-203ENST00000425444 NCAPG2Q86XI2 1143 aa15.05■□□□□ -0
SGCE-203ENST00000425444 LRRC47Q8N1G4 583 aaKnown RBP15.05■□□□□ -0
SGCE-203ENST00000425444 NEDD1Q8NHV4 660 aa15.05■□□□□ -0
SGCE-203ENST00000425444 HERVK_113Q902F9 699 aa15.05■□□□□ -0
SGCE-203ENST00000425444 MAML3Q96JK9 1138 aa15.05■□□□□ -0
SGCE-203ENST00000425444 NUP88Q99567 741 aaPredicted RBP15.05■□□□□ -0
SGCE-203ENST00000425444 MTMR4Q9NYA4 1195 aa15.05■□□□□ -0
SGCE-203ENST00000425444 PPP1R9AQ9ULJ8 1098 aa15.05■□□□□ -0
SGCE-203ENST00000425444 RANBP6O60518 1105 aaKnown RBP15.04■□□□□ -0
SGCE-203ENST00000425444 HSPD1P10809 573 aaKnown RBP15.04■□□□□ -0
SGCE-203ENST00000425444 PPP4R3BQ5MIZ7 849 aa15.04■□□□□ -0
SGCE-203ENST00000425444 TMEM199Q8N511 208 aa15.04■□□□□ -0
SGCE-203ENST00000425444 SHCBP1Q8NEM2 672 aa15.04■□□□□ -0
SGCE-203ENST00000425444 NUP133Q8WUM0 1156 aa15.04■□□□□ -0
SGCE-203ENST00000425444 SLF1Q9BQI6 1058 aa15.04■□□□□ -0
SGCE-203ENST00000425444 C11orf16Q9NQ32 467 aa15.04■□□□□ -0
SGCE-203ENST00000425444 YBX2Q9Y2T7 364 aaKnown RBP15.04■□□□□ -0
SGCE-203ENST00000425444 CTDP1Q9Y5B0 961 aaPredicted RBP15.04■□□□□ -0
SGCE-203ENST00000425444 HIP1O00291 1037 aa15.03■□□□□ -0
SGCE-203ENST00000425444 MRE11P49959 708 aa15.03■□□□□ -0
SGCE-203ENST00000425444 ACLYP53396 1101 aa15.03■□□□□ -0
SGCE-203ENST00000425444 TMEM132BQ14DG7 1078 aa15.03■□□□□ -0
SGCE-203ENST00000425444 ALX1Q15699 326 aa15.03■□□□□ -0
SGCE-203ENST00000425444 RRP12Q5JTH9 1297 aaKnown RBP15.03■□□□□ -0
SGCE-203ENST00000425444 CWC27Q6UX04 472 aaKnown RBP15.03■□□□□ -0
SGCE-203ENST00000425444 MROH8Q9H579 483 aa15.03■□□□□ -0
SGCE-203ENST00000425444 NRBP1Q9UHY1 535 aa15.03■□□□□ -0
SGCE-203ENST00000425444 ANAPC4Q9UJX5 808 aa15.03■□□□□ -0
SGCE-203ENST00000425444 SYNPO2Q9UMS6 1093 aa15.03■□□□□ -0
SGCE-203ENST00000425444 STX8Q9UNK0 236 aa15.03■□□□□ -0
SGCE-203ENST00000425444 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.03■□□□□ -0
SGCE-203ENST00000425444 GBF1Q92538 1859 aa15.03■□□□□ -0
SGCE-203ENST00000425444 TRIOO75962 3097 aa15.03■□□□□ -0
SGCE-203ENST00000425444 CFAP54Q96N23 3096 aa15.03■□□□□ -0
SGCE-203ENST00000425444 ZNFX1Q9P2E3 1918 aaKnown RBP15.02■□□□□ -0
SGCE-203ENST00000425444 MYH4Q9Y623 1939 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms