RNA–Protein interactions for RNA: ENST00000423723.1

NCDN-204, Transcript of neurochondrin, humanhuman

TSL 3

Gene NCDN, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-204ENST00000423723 WDR78Q5VTH9 848 aa13.6□□□□□ -0.23
NCDN-204ENST00000423723 SNRNP48Q6IEG0 339 aaKnown RBP13.6□□□□□ -0.23
NCDN-204ENST00000423723 KIFC2Q96AC6 838 aa13.6□□□□□ -0.23
NCDN-204ENST00000423723 MMP19Q99542 508 aa13.6□□□□□ -0.23
NCDN-204ENST00000423723 USP26Q9BXU7 913 aa13.6□□□□□ -0.23
NCDN-204ENST00000423723 CNNM2Q9H8M5 875 aa13.6□□□□□ -0.23
NCDN-204ENST00000423723 PRR12Q9ULL5 1215 aa13.6□□□□□ -0.23
NCDN-204ENST00000423723 RAD21O60216 631 aa13.59□□□□□ -0.23
NCDN-204ENST00000423723 DDIT3P35638 169 aa13.59□□□□□ -0.23
NCDN-204ENST00000423723 PTH1RQ03431 593 aa13.59□□□□□ -0.23
NCDN-204ENST00000423723 RRP12Q5JTH9 1297 aaKnown RBP13.59□□□□□ -0.23
NCDN-204ENST00000423723 KCTD1Q719H9 257 aa13.59□□□□□ -0.23
NCDN-204ENST00000423723 NECAB2Q7Z6G3 386 aa13.59□□□□□ -0.23
NCDN-204ENST00000423723 PAWRQ96IZ0 340 aaKnown RBP13.59□□□□□ -0.23
NCDN-204ENST00000423723 TINF2Q9BSI4 451 aa13.59□□□□□ -0.23
NCDN-204ENST00000423723 HTATIP2Q9BUP3 242 aa13.59□□□□□ -0.23
NCDN-204ENST00000423723 KRT23Q9C075 422 aa13.59□□□□□ -0.23
NCDN-204ENST00000423723 MAF1Q9H063 256 aa13.59□□□□□ -0.23
NCDN-204ENST00000423723 RANBP17Q9H2T7 1088 aaKnown RBP13.59□□□□□ -0.23
NCDN-204ENST00000423723 RAVER2Q9HCJ3 691 aaKnown RBP13.59□□□□□ -0.23
NCDN-204ENST00000423723 DDX20Q9UHI6 824 aaKnown RBP13.59□□□□□ -0.23
NCDN-204ENST00000423723 K7ELQ4 463 aaPredicted RBP13.58□□□□□ -0.24
NCDN-204ENST00000423723 SEPT4O43236 478 aa13.58□□□□□ -0.24
NCDN-204ENST00000423723 KDM4AO75164 1064 aa13.58□□□□□ -0.24
NCDN-204ENST00000423723 CYP21A2P08686 494 aa13.58□□□□□ -0.24
NCDN-204ENST00000423723 ZNF543Q08ER8 600 aa13.58□□□□□ -0.24
NCDN-204ENST00000423723 SEC23AQ15436 765 aa13.58□□□□□ -0.24
NCDN-204ENST00000423723 IQCA1Q86XH1 822 aa13.58□□□□□ -0.24
NCDN-204ENST00000423723 CPXCR1Q8N123 301 aa13.58□□□□□ -0.24
NCDN-204ENST00000423723 ENAHQ8N8S7 591 aaPredicted RBP13.58□□□□□ -0.24
NCDN-204ENST00000423723 FGD4Q96M96 766 aa13.58□□□□□ -0.24
NCDN-204ENST00000423723 ZSCAN10Q96SZ4 725 aaPredicted RBP13.58□□□□□ -0.24
NCDN-204ENST00000423723 TOMM22Q9NS69 142 aa13.58□□□□□ -0.24
NCDN-204ENST00000423723 U3KPZ7 1027 aaPredicted RBP13.58□□□□□ -0.24
NCDN-204ENST00000423723 SYNGAP1Q96PV0 1343 aa13.58□□□□□ -0.24
NCDN-204ENST00000423723 DNAH12Q6ZR08 3092 aa13.58□□□□□ -0.24
NCDN-204ENST00000423723 LAMA4Q16363 1823 aa13.57□□□□□ -0.24
NCDN-204ENST00000423723 B4E1Z4 1266 aa13.57□□□□□ -0.24
NCDN-204ENST00000423723 ICAM1P05362 532 aa13.57□□□□□ -0.24
NCDN-204ENST00000423723 PGK2P07205 417 aa13.57□□□□□ -0.24
NCDN-204ENST00000423723 GPATCH4Q5T3I0 446 aaKnown RBP13.57□□□□□ -0.24
NCDN-204ENST00000423723 TTBK2Q6IQ55 1244 aa13.57□□□□□ -0.24
NCDN-204ENST00000423723 RASGRP2Q7LDG7 609 aa13.57□□□□□ -0.24
NCDN-204ENST00000423723 FAM133AQ8N9E0 248 aa13.57□□□□□ -0.24
NCDN-204ENST00000423723 DIS3LQ8TF46 1054 aaKnown RBP13.57□□□□□ -0.24
NCDN-204ENST00000423723 AGBL1Q96MI9 1066 aa13.57□□□□□ -0.24
NCDN-204ENST00000423723 PNMA2Q9UL42 364 aa13.57□□□□□ -0.24
NCDN-204ENST00000423723 EPB41L2O43491 1005 aaKnown RBP13.56□□□□□ -0.24
NCDN-204ENST00000423723 SNAI1O95863 264 aaPredicted RBP13.56□□□□□ -0.24
NCDN-204ENST00000423723 ZNF865P0CJ78 1059 aaPredicted RBP13.56□□□□□ -0.24
NCDN-204ENST00000423723 SYDE2Q5VT97 1194 aa13.56□□□□□ -0.24
NCDN-204ENST00000423723 SAMD1Q6SPF0 538 aaPredicted RBP13.56□□□□□ -0.24
NCDN-204ENST00000423723 MTA3Q9BTC8 594 aa13.56□□□□□ -0.24
NCDN-204ENST00000423723 LSG1Q9H089 658 aaKnown RBP13.56□□□□□ -0.24
NCDN-204ENST00000423723 PRO3102Q9H379 93 aa13.56□□□□□ -0.24
NCDN-204ENST00000423723 ACAD9Q9H845 621 aa13.56□□□□□ -0.24
NCDN-204ENST00000423723 A1CFQ9NQ94 594 aaKnown RBP13.56□□□□□ -0.24
NCDN-204ENST00000423723 PFASO15067 1338 aa13.56□□□□□ -0.24
NCDN-204ENST00000423723 WDR19Q8NEZ3 1342 aa13.56□□□□□ -0.24
NCDN-204ENST00000423723 SMCHD1A6NHR9 2005 aa13.56□□□□□ -0.24
NCDN-204ENST00000423723 MCM4P33991 863 aa13.55□□□□□ -0.24
NCDN-204ENST00000423723 NKX3-2P78367 333 aa13.55□□□□□ -0.24
NCDN-204ENST00000423723 PNMA1Q8ND90 353 aa13.55□□□□□ -0.24
NCDN-204ENST00000423723 RGS22Q8NE09 1264 aa13.55□□□□□ -0.24
NCDN-204ENST00000423723 IL27Q8NEV9 243 aa13.55□□□□□ -0.24
NCDN-204ENST00000423723 MORC4Q8TE76 937 aa13.55□□□□□ -0.24
NCDN-204ENST00000423723 DDX11Q96FC9 970 aa13.55□□□□□ -0.24
NCDN-204ENST00000423723 ESYT1Q9BSJ8 1104 aa13.55□□□□□ -0.24
NCDN-204ENST00000423723 KATNBL1Q9H079 304 aa13.55□□□□□ -0.24
NCDN-204ENST00000423723 LOC102724159A0A0B4J2E5 919 aa13.54□□□□□ -0.24
NCDN-204ENST00000423723 E7EWF7 191 aa13.54□□□□□ -0.24
NCDN-204ENST00000423723 DNM1LO00429 736 aa13.54□□□□□ -0.24
NCDN-204ENST00000423723 NECTIN1Q15223 517 aa13.54□□□□□ -0.24
NCDN-204ENST00000423723 PWP2Q15269 919 aaKnown RBP13.54□□□□□ -0.24
NCDN-204ENST00000423723 PRAMEF19Q5SWL8 479 aa13.54□□□□□ -0.24
NCDN-204ENST00000423723 CYB5R4Q7L1T6 521 aa13.54□□□□□ -0.24
NCDN-204ENST00000423723 ANKRD35Q8N283 1001 aa13.54□□□□□ -0.24
NCDN-204ENST00000423723 ARRDC4Q8NCT1 418 aa13.54□□□□□ -0.24
NCDN-204ENST00000423723 TRERF1Q96PN7 1200 aa13.54□□□□□ -0.24
NCDN-204ENST00000423723 ZKSCAN3Q9BRR0 538 aa13.54□□□□□ -0.24
NCDN-204ENST00000423723 C11orf49Q9H6J7 331 aa13.54□□□□□ -0.24
NCDN-204ENST00000423723 RNF146Q9NTX7 359 aa13.54□□□□□ -0.24
NCDN-204ENST00000423723 CTDP1Q9Y5B0 961 aaPredicted RBP13.54□□□□□ -0.24
NCDN-204ENST00000423723 TAF6LQ9Y6J9 622 aa13.54□□□□□ -0.24
NCDN-204ENST00000423723 TNKSO95271 1327 aa13.54□□□□□ -0.24
NCDN-204ENST00000423723 DDX11L8A8MPP1 907 aa13.53□□□□□ -0.24
NCDN-204ENST00000423723 H0YGN5 161 aa13.53□□□□□ -0.24
NCDN-204ENST00000423723 TAL1P17542 331 aaPredicted RBP13.53□□□□□ -0.24
NCDN-204ENST00000423723 PTMSP20962 102 aa13.53□□□□□ -0.24
NCDN-204ENST00000423723 SLC16A2P36021 539 aa13.53□□□□□ -0.24
NCDN-204ENST00000423723 ASPRV1Q53RT3 343 aa13.53□□□□□ -0.24
NCDN-204ENST00000423723 MUM1L1Q5H9M0 696 aa13.53□□□□□ -0.24
NCDN-204ENST00000423723 C1orf53Q5VUE5 145 aa13.53□□□□□ -0.24
NCDN-204ENST00000423723 STOX1Q6ZVD7 989 aa13.53□□□□□ -0.24
NCDN-204ENST00000423723 SPRYD3Q8NCJ5 442 aa13.53□□□□□ -0.24
NCDN-204ENST00000423723 IGDCC4Q8TDY8 1250 aa13.53□□□□□ -0.24
NCDN-204ENST00000423723 CLEC4DQ8WXI8 215 aa13.53□□□□□ -0.24
NCDN-204ENST00000423723 MTMR8Q96EF0 704 aa13.53□□□□□ -0.24
NCDN-204ENST00000423723 ABHD16BQ9H3Z7 469 aa13.53□□□□□ -0.24
NCDN-204ENST00000423723 CYP39A1Q9NYL5 469 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms