RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 NCOA7Q8NI08 942 aa25.07■■□□□ 1.6
CPNE1-211ENST00000420363 MMP19Q99542 508 aa25.07■■□□□ 1.6
CPNE1-211ENST00000420363 KAT14Q9H8E8 782 aa25.07■■□□□ 1.6
CPNE1-211ENST00000420363 FBXO40Q9UH90 709 aa25.07■■□□□ 1.6
CPNE1-211ENST00000420363 PRR12Q9ULL5 1215 aa25.07■■□□□ 1.6
CPNE1-211ENST00000420363 MTMR7Q9Y216 660 aa25.07■■□□□ 1.6
CPNE1-211ENST00000420363 SZT2Q5T011 3432 aa25.06■■□□□ 1.6
CPNE1-211ENST00000420363 KCTD2Q14681 263 aa25.06■■□□□ 1.6
CPNE1-211ENST00000420363 GPATCH4Q5T3I0 446 aaKnown RBP25.06■■□□□ 1.6
CPNE1-211ENST00000420363 CHST13Q8NET6 341 aa25.06■■□□□ 1.6
CPNE1-211ENST00000420363 NPLOC4Q8TAT6 608 aa25.06■■□□□ 1.6
CPNE1-211ENST00000420363 RAVER2Q9HCJ3 691 aaKnown RBP25.06■■□□□ 1.6
CPNE1-211ENST00000420363 ANO2Q9NQ90 1003 aa25.06■■□□□ 1.6
CPNE1-211ENST00000420363 ZNF536O15090 1300 aa25.06■■□□□ 1.6
CPNE1-211ENST00000420363 MNX1P50219 401 aaPredicted RBP25.05■■□□□ 1.6
CPNE1-211ENST00000420363 MFSD14CQ5VZR4 134 aa25.05■■□□□ 1.6
CPNE1-211ENST00000420363 STOX1Q6ZVD7 989 aa25.05■■□□□ 1.6
CPNE1-211ENST00000420363 CYB5R4Q7L1T6 521 aa25.05■■□□□ 1.6
CPNE1-211ENST00000420363 CPXCR1Q8N123 301 aa25.05■■□□□ 1.6
CPNE1-211ENST00000420363 RANBP17Q9H2T7 1088 aaKnown RBP25.05■■□□□ 1.6
CPNE1-211ENST00000420363 DIS3Q9Y2L1 958 aaKnown RBP25.05■■□□□ 1.6
CPNE1-211ENST00000420363 RIPK3Q9Y572 518 aa25.05■■□□□ 1.6
CPNE1-211ENST00000420363 TAF6LQ9Y6J9 622 aa25.05■■□□□ 1.6
CPNE1-211ENST00000420363 COBLO75128 1261 aa25.04■■□□□ 1.6
CPNE1-211ENST00000420363 SEC23AQ15436 765 aa25.04■■□□□ 1.6
CPNE1-211ENST00000420363 TKFCQ3LXA3 575 aa25.04■■□□□ 1.6
CPNE1-211ENST00000420363 IFIT1BQ5T764 474 aaKnown RBP25.04■■□□□ 1.6
CPNE1-211ENST00000420363 SYDE2Q5VT97 1194 aa25.04■■□□□ 1.6
CPNE1-211ENST00000420363 FLRT1Q9NZU1 646 aa25.04■■□□□ 1.6
CPNE1-211ENST00000420363 ZMYND8Q9ULU4 1186 aaPredicted RBP25.04■■□□□ 1.6
CPNE1-211ENST00000420363 FRMPD3Q5JV73 1810 aa25.03■■□□□ 1.6
CPNE1-211ENST00000420363 NECTIN1Q15223 517 aa25.03■■□□□ 1.6
CPNE1-211ENST00000420363 CHMP4CQ96CF2 233 aa25.03■■□□□ 1.6
CPNE1-211ENST00000420363 MTA3Q9BTC8 594 aa25.03■■□□□ 1.6
CPNE1-211ENST00000420363 PNMA2Q9UL42 364 aa25.03■■□□□ 1.6
CPNE1-211ENST00000420363 FRMPD2Q68DX3 1309 aaPredicted RBP25.03■■□□□ 1.6
CPNE1-211ENST00000420363 CCND3P30281 292 aaPredicted RBP25.02■■□□□ 1.6
CPNE1-211ENST00000420363 SART3Q15020 963 aaKnown RBP25.02■■□□□ 1.6
CPNE1-211ENST00000420363 ASPRV1Q53RT3 343 aa25.02■■□□□ 1.6
CPNE1-211ENST00000420363 TTBK2Q6IQ55 1244 aa25.02■■□□□ 1.6
CPNE1-211ENST00000420363 MB21D2Q8IYB1 491 aaPredicted RBP25.02■■□□□ 1.6
CPNE1-211ENST00000420363 MAML3Q96JK9 1138 aa25.02■■□□□ 1.6
CPNE1-211ENST00000420363 SLC27A2O14975 620 aa25.01■■□□□ 1.59
CPNE1-211ENST00000420363 ICAM1P05362 532 aa25.01■■□□□ 1.59
CPNE1-211ENST00000420363 ZNF792Q3KQV3 632 aa25.01■■□□□ 1.59
CPNE1-211ENST00000420363 RNF20Q5VTR2 975 aa25.01■■□□□ 1.59
CPNE1-211ENST00000420363 CREB3L3Q68CJ9 461 aa25.01■■□□□ 1.59
CPNE1-211ENST00000420363 ACAD9Q9H845 621 aa25.01■■□□□ 1.59
CPNE1-211ENST00000420363 DNAJC25-GNG10A0A024R161 153 aa25■■□□□ 1.59
CPNE1-211ENST00000420363 ERICH2A1L162 156 aa25■■□□□ 1.59
CPNE1-211ENST00000420363 SYN1P17600 705 aa25■■□□□ 1.59
CPNE1-211ENST00000420363 BMP8BP34820 402 aa25■■□□□ 1.59
CPNE1-211ENST00000420363 LHX8Q68G74 356 aa25■■□□□ 1.59
CPNE1-211ENST00000420363 MSL3Q8N5Y2 521 aaKnown RBP25■■□□□ 1.59
CPNE1-211ENST00000420363 GDF15Q99988 308 aa25■■□□□ 1.59
CPNE1-211ENST00000420363 GPCPD1Q9NPB8 672 aa25■■□□□ 1.59
CPNE1-211ENST00000420363 SLC16A2P36021 539 aa24.99■■□□□ 1.59
CPNE1-211ENST00000420363 WDR19Q8NEZ3 1342 aa24.99■■□□□ 1.59
CPNE1-211ENST00000420363 AGBL1Q96MI9 1066 aa24.99■■□□□ 1.59
CPNE1-211ENST00000420363 RNF146Q9NTX7 359 aa24.99■■□□□ 1.59
CPNE1-211ENST00000420363 NRBP1Q9UHY1 535 aa24.99■■□□□ 1.59
CPNE1-211ENST00000420363 PFASO15067 1338 aa24.98■■□□□ 1.59
CPNE1-211ENST00000420363 IFIT3O14879 490 aaKnown RBP24.98■■□□□ 1.59
CPNE1-211ENST00000420363 PGK2P07205 417 aa24.98■■□□□ 1.59
CPNE1-211ENST00000420363 PARP1P09874 1014 aaKnown RBP24.98■■□□□ 1.59
CPNE1-211ENST00000420363 CYBAP13498 195 aa24.98■■□□□ 1.59
CPNE1-211ENST00000420363 ANTXR2P58335 489 aa24.98■■□□□ 1.59
CPNE1-211ENST00000420363 CCDC174Q6PII3 467 aa24.98■■□□□ 1.59
CPNE1-211ENST00000420363 CCPG1Q9ULG6 757 aa24.98■■□□□ 1.59
CPNE1-211ENST00000420363 SOX1O00570 391 aaPredicted RBP24.97■■□□□ 1.59
CPNE1-211ENST00000420363 MSCO60682 206 aa24.97■■□□□ 1.59
CPNE1-211ENST00000420363 CYP2C19P33261 490 aa24.97■■□□□ 1.59
CPNE1-211ENST00000420363 WTAPQ15007 396 aa24.97■■□□□ 1.59
CPNE1-211ENST00000420363 ZNF467Q7Z7K2 595 aaPredicted RBP24.97■■□□□ 1.59
CPNE1-211ENST00000420363 ANKRD35Q8N283 1001 aa24.97■■□□□ 1.59
CPNE1-211ENST00000420363 DDX11Q96FC9 970 aa24.97■■□□□ 1.59
CPNE1-211ENST00000420363 TRERF1Q96PN7 1200 aa24.97■■□□□ 1.59
CPNE1-211ENST00000420363 HOMER2Q9NSB8 354 aa24.97■■□□□ 1.59
CPNE1-211ENST00000420363 ALPK3Q96L96 1907 aa24.96■■□□□ 1.59
CPNE1-211ENST00000420363 COL6A1P12109 1028 aa24.96■■□□□ 1.59
CPNE1-211ENST00000420363 ALAS1P13196 640 aa24.96■■□□□ 1.59
CPNE1-211ENST00000420363 SLC4A3P48751 1232 aa24.96■■□□□ 1.59
CPNE1-211ENST00000420363 LRCH3Q96II8 777 aa24.96■■□□□ 1.59
CPNE1-211ENST00000420363 TINF2Q9BSI4 451 aa24.96■■□□□ 1.59
CPNE1-211ENST00000420363 SYNGAP1Q96PV0 1343 aa24.95■■□□□ 1.58
CPNE1-211ENST00000420363 GOLGA8HP0CJ92 632 aa24.95■■□□□ 1.58
CPNE1-211ENST00000420363 CNGA1P29973 690 aa24.95■■□□□ 1.58
CPNE1-211ENST00000420363 MCM5P33992 734 aa24.95■■□□□ 1.58
CPNE1-211ENST00000420363 MAGEA10P43363 369 aaPredicted RBP24.95■■□□□ 1.58
CPNE1-211ENST00000420363 TMEM67Q5HYA8 995 aa24.95■■□□□ 1.58
CPNE1-211ENST00000420363 MAMDC4Q6UXC1 1216 aa24.95■■□□□ 1.58
CPNE1-211ENST00000420363 IGDCC4Q8TDY8 1250 aa24.95■■□□□ 1.58
CPNE1-211ENST00000420363 TMEM87BQ96K49 555 aa24.95■■□□□ 1.58
CPNE1-211ENST00000420363 A1CFQ9NQ94 594 aaKnown RBP24.95■■□□□ 1.58
CPNE1-211ENST00000420363 SNAP25P60880 206 aa24.94■■□□□ 1.58
CPNE1-211ENST00000420363 TSGA10IPQ3SY00 556 aa24.94■■□□□ 1.58
CPNE1-211ENST00000420363 SMCHD1A6NHR9 2005 aa24.94■■□□□ 1.58
CPNE1-211ENST00000420363 LCTP09848 1927 aa24.94■■□□□ 1.58
CPNE1-211ENST00000420363 MYH6P13533 1939 aa24.94■■□□□ 1.58
CPNE1-211ENST00000420363 EPB41L2O43491 1005 aaKnown RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms