RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 DIS3L2Q8IYB7 885 aaKnown RBP20.23■□□□□ 0.83
SHANK3-202ENST00000414786 DNAAF3Q8N9W5 541 aa20.23■□□□□ 0.83
SHANK3-202ENST00000414786 OTULINQ96BN8 352 aa20.23■□□□□ 0.83
SHANK3-202ENST00000414786 FMNL1O95466 1100 aaPredicted RBP20.23■□□□□ 0.83
SHANK3-202ENST00000414786 PCDH11XQ9BZA7 1347 aa20.23■□□□□ 0.83
SHANK3-202ENST00000414786 PCDH11YQ9BZA8 1340 aa20.23■□□□□ 0.83
SHANK3-202ENST00000414786 M0R2C6 588 aa20.23■□□□□ 0.83
SHANK3-202ENST00000414786 BRAPQ7Z569 592 aa20.23■□□□□ 0.83
SHANK3-202ENST00000414786 VCX3AQ9NNX9 186 aa20.23■□□□□ 0.83
SHANK3-202ENST00000414786 MAST3O60307 1309 aa20.23■□□□□ 0.83
SHANK3-202ENST00000414786 NEMP1O14524 444 aa20.23■□□□□ 0.83
SHANK3-202ENST00000414786 KCNA1Q09470 495 aa20.23■□□□□ 0.83
SHANK3-202ENST00000414786 DMP1Q13316 513 aaPredicted RBP20.23■□□□□ 0.83
SHANK3-202ENST00000414786 ARMCX5Q6P1M9 558 aa20.23■□□□□ 0.83
SHANK3-202ENST00000414786 THAP12O43422 761 aa20.23■□□□□ 0.83
SHANK3-202ENST00000414786 PPIP5K1Q6PFW1 1433 aa20.23■□□□□ 0.83
SHANK3-202ENST00000414786 MIGA2Q7L4E1 593 aa20.23■□□□□ 0.83
SHANK3-202ENST00000414786 CFAP36Q96G28 342 aa20.23■□□□□ 0.83
SHANK3-202ENST00000414786 RPGRIP1Q96KN7 1286 aa20.23■□□□□ 0.83
SHANK3-202ENST00000414786 C1orf112Q9NSG2 853 aa20.23■□□□□ 0.83
SHANK3-202ENST00000414786 DCAF4L1Q3SXM0 396 aa20.22■□□□□ 0.83
SHANK3-202ENST00000414786 ANO1Q5XXA6 986 aa20.22■□□□□ 0.83
SHANK3-202ENST00000414786 TEKT1Q969V4 418 aa20.22■□□□□ 0.83
SHANK3-202ENST00000414786 TRPA1O75762 1119 aa20.22■□□□□ 0.83
SHANK3-202ENST00000414786 EEF1GP26641 437 aaKnown RBP20.22■□□□□ 0.83
SHANK3-202ENST00000414786 PDE6CP51160 858 aa20.22■□□□□ 0.83
SHANK3-202ENST00000414786 PCIF1Q9H4Z3 704 aa20.22■□□□□ 0.83
SHANK3-202ENST00000414786 ZNF148Q9UQR1 794 aa20.22■□□□□ 0.83
SHANK3-202ENST00000414786 PDE8AO60658 829 aa20.22■□□□□ 0.83
SHANK3-202ENST00000414786 GPC4O75487 556 aa20.22■□□□□ 0.83
SHANK3-202ENST00000414786 ZAP70P43403 619 aa20.22■□□□□ 0.83
SHANK3-202ENST00000414786 YWHAEP62258 255 aaKnown RBP20.22■□□□□ 0.83
SHANK3-202ENST00000414786 CERKLQ49MI3 558 aaPredicted RBP20.22■□□□□ 0.83
SHANK3-202ENST00000414786 RGS16O15492 202 aaPredicted RBP20.22■□□□□ 0.83
SHANK3-202ENST00000414786 INPP5BP32019 993 aa20.22■□□□□ 0.83
SHANK3-202ENST00000414786 KLHL40Q2TBA0 621 aa20.22■□□□□ 0.83
SHANK3-202ENST00000414786 HAUS8Q9BT25 410 aa20.22■□□□□ 0.83
SHANK3-202ENST00000414786 PANK4Q9NVE7 773 aa20.22■□□□□ 0.83
SHANK3-202ENST00000414786 ABCC11Q96J66 1382 aa20.22■□□□□ 0.83
SHANK3-202ENST00000414786 GIGYF1O75420 1035 aaPredicted RBP20.22■□□□□ 0.83
SHANK3-202ENST00000414786 CACNB1Q02641 598 aaPredicted RBP20.22■□□□□ 0.83
SHANK3-202ENST00000414786 MAP10Q9P2G4 905 aa20.22■□□□□ 0.83
SHANK3-202ENST00000414786 AMFRQ9UKV5 643 aa20.22■□□□□ 0.83
SHANK3-202ENST00000414786 TROVE2P10155 538 aaKnown RBP eCLIP20.22■□□□□ 0.83
SHANK3-202ENST00000414786 ALDH1B1P30837 517 aa20.22■□□□□ 0.83
SHANK3-202ENST00000414786 IRX4P78413 519 aa20.22■□□□□ 0.83
SHANK3-202ENST00000414786 HS1BP3Q53T59 392 aa20.22■□□□□ 0.83
SHANK3-202ENST00000414786 CABS1Q96KC9 395 aa20.22■□□□□ 0.83
SHANK3-202ENST00000414786 GBP5Q96PP8 586 aa20.22■□□□□ 0.83
SHANK3-202ENST00000414786 RWDD4Q6NW29 188 aaKnown RBP20.21■□□□□ 0.83
SHANK3-202ENST00000414786 ARHGAP24Q8N264 748 aa20.21■□□□□ 0.83
SHANK3-202ENST00000414786 SPATA5Q8NB90 893 aa20.21■□□□□ 0.83
SHANK3-202ENST00000414786 RIC8AQ9NPQ8 531 aa20.21■□□□□ 0.83
SHANK3-202ENST00000414786 NXF1Q9UBU9 619 aaKnown RBP20.21■□□□□ 0.83
SHANK3-202ENST00000414786 GYG1P46976 350 aa20.21■□□□□ 0.83
SHANK3-202ENST00000414786 PDE1BQ01064 536 aa20.21■□□□□ 0.83
SHANK3-202ENST00000414786 TTC25Q96NG3 672 aa20.21■□□□□ 0.83
SHANK3-202ENST00000414786 DDX41Q9UJV9 622 aaKnown RBP20.21■□□□□ 0.83
SHANK3-202ENST00000414786 POLR2MP0CAP2 368 aa20.21■□□□□ 0.83
SHANK3-202ENST00000414786 PDE6BP35913 854 aa20.21■□□□□ 0.83
SHANK3-202ENST00000414786 PSTPIP2Q9H939 334 aa20.21■□□□□ 0.83
SHANK3-202ENST00000414786 LMNB1P20700 586 aa20.21■□□□□ 0.83
SHANK3-202ENST00000414786 ARHGAP4P98171 946 aa20.21■□□□□ 0.83
SHANK3-202ENST00000414786 BFSP1Q12934 665 aa20.21■□□□□ 0.83
SHANK3-202ENST00000414786 RINT1Q6NUQ1 792 aa20.21■□□□□ 0.83
SHANK3-202ENST00000414786 RNMTO43148 476 aaKnown RBP20.21■□□□□ 0.83
SHANK3-202ENST00000414786 CCDC38Q502W7 563 aa20.21■□□□□ 0.83
SHANK3-202ENST00000414786 FANCCQ00597 558 aa20.2■□□□□ 0.82
SHANK3-202ENST00000414786 YWHAHQ04917 246 aaPredicted RBP20.2■□□□□ 0.82
SHANK3-202ENST00000414786 RAB44Q7Z6P3 723 aaPredicted RBP20.2■□□□□ 0.82
SHANK3-202ENST00000414786 INTUQ9ULD6 942 aa20.2■□□□□ 0.82
SHANK3-202ENST00000414786 CASKIN1Q8WXD9 1431 aa20.2■□□□□ 0.82
SHANK3-202ENST00000414786 KRIT1O00522 736 aa20.2■□□□□ 0.82
SHANK3-202ENST00000414786 TRIM37O94972 964 aa20.2■□□□□ 0.82
SHANK3-202ENST00000414786 PIDD1Q9HB75 910 aa20.2■□□□□ 0.82
SHANK3-202ENST00000414786 KCTD1Q719H9 257 aa20.2■□□□□ 0.82
SHANK3-202ENST00000414786 AFF4Q9UHB7 1163 aaKnown RBP20.2■□□□□ 0.82
SHANK3-202ENST00000414786 CDO1Q16878 200 aa20.2■□□□□ 0.82
SHANK3-202ENST00000414786 EEF1B2P24534 225 aaKnown RBP20.19■□□□□ 0.82
SHANK3-202ENST00000414786 RSBN1LQ6PCB5 846 aaPredicted RBP20.19■□□□□ 0.82
SHANK3-202ENST00000414786 WDR91A4D1P6 747 aa20.19■□□□□ 0.82
SHANK3-202ENST00000414786 TMEM232C9JQI7 657 aa20.19■□□□□ 0.82
SHANK3-202ENST00000414786 MRPL50Q8N5N7 158 aaKnown RBP20.19■□□□□ 0.82
SHANK3-202ENST00000414786 SH3TC1Q8TE82 1336 aa20.19■□□□□ 0.82
SHANK3-202ENST00000414786 SYF2O95926 243 aaKnown RBP20.19■□□□□ 0.82
SHANK3-202ENST00000414786 PHBP35232 272 aa20.19■□□□□ 0.82
SHANK3-202ENST00000414786 KCTD2Q14681 263 aa20.19■□□□□ 0.82
SHANK3-202ENST00000414786 SLC27A2O14975 620 aa20.19■□□□□ 0.82
SHANK3-202ENST00000414786 TTC4O95801 387 aa20.19■□□□□ 0.82
SHANK3-202ENST00000414786 ACCSLQ4AC99 568 aa20.19■□□□□ 0.82
SHANK3-202ENST00000414786 REXO1Q8N1G1 1221 aaKnown RBP20.19■□□□□ 0.82
SHANK3-202ENST00000414786 SLC39A2Q9NP94 309 aa20.19■□□□□ 0.82
SHANK3-202ENST00000414786 CD58P19256 250 aa20.19■□□□□ 0.82
SHANK3-202ENST00000414786 PTPREP23469 700 aa20.19■□□□□ 0.82
SHANK3-202ENST00000414786 NFX1Q12986 1120 aaKnown RBP20.19■□□□□ 0.82
SHANK3-202ENST00000414786 FAM49AQ9H0Q0 323 aaPredicted RBP20.19■□□□□ 0.82
SHANK3-202ENST00000414786 PPFIA4O75335 1185 aa20.18■□□□□ 0.82
SHANK3-202ENST00000414786 CAVIN2O95810 425 aa20.18■□□□□ 0.82
SHANK3-202ENST00000414786 HADHAP40939 763 aa20.18■□□□□ 0.82
SHANK3-202ENST00000414786 PLA2G4DQ86XP0 818 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms