RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 LBX1P52954 281 aa35.55■■■■□ 3.28
CSNK1E-206ENST00000413574 PORCNQ9H237 461 aa35.55■■■■□ 3.28
CSNK1E-206ENST00000413574 RBM28Q9NW13 759 aaKnown RBP35.55■■■■□ 3.28
CSNK1E-206ENST00000413574 NID2Q14112 1375 aa35.55■■■■□ 3.28
CSNK1E-206ENST00000413574 CD2BP2O95400 341 aaKnown RBP35.54■■■■□ 3.28
CSNK1E-206ENST00000413574 CTGFP29279 349 aa35.54■■■■□ 3.28
CSNK1E-206ENST00000413574 AGBL1Q96MI9 1066 aa35.54■■■■□ 3.28
CSNK1E-206ENST00000413574 MOV10L1Q9BXT6 1211 aaKnown RBP35.54■■■■□ 3.28
CSNK1E-206ENST00000413574 ARHGAP39Q9C0H5 1083 aa35.54■■■■□ 3.28
CSNK1E-206ENST00000413574 RIOX1Q9H6W3 641 aa35.54■■■■□ 3.28
CSNK1E-206ENST00000413574 FKTNO75072 461 aa35.54■■■■□ 3.28
CSNK1E-206ENST00000413574 FDX1P10109 184 aa35.54■■■■□ 3.28
CSNK1E-206ENST00000413574 CTCFP49711 727 aaPredicted RBP35.54■■■■□ 3.28
CSNK1E-206ENST00000413574 GNAQP50148 359 aa35.54■■■■□ 3.28
CSNK1E-206ENST00000413574 CDC37Q16543 378 aaPredicted RBP35.54■■■■□ 3.28
CSNK1E-206ENST00000413574 ME3Q16798 604 aa35.54■■■■□ 3.28
CSNK1E-206ENST00000413574 NOM1Q5C9Z4 860 aaKnown RBP35.54■■■■□ 3.28
CSNK1E-206ENST00000413574 STAT3P40763 770 aa35.53■■■■□ 3.28
CSNK1E-206ENST00000413574 LACTBP83111 547 aaPredicted RBP35.53■■■■□ 3.28
CSNK1E-206ENST00000413574 SNRNP48Q6IEG0 339 aaKnown RBP35.53■■■■□ 3.28
CSNK1E-206ENST00000413574 HOMER1Q86YM7 354 aa35.53■■■■□ 3.28
CSNK1E-206ENST00000413574 CD99L2Q8TCZ2 262 aa35.53■■■■□ 3.28
CSNK1E-206ENST00000413574 PIGSQ96S52 555 aa35.53■■■■□ 3.28
CSNK1E-206ENST00000413574 LZTS2Q9BRK4 669 aa35.53■■■■□ 3.28
CSNK1E-206ENST00000413574 EFCC1Q9HA90 598 aa35.53■■■■□ 3.28
CSNK1E-206ENST00000413574 RIPK3Q9Y572 518 aa35.53■■■■□ 3.28
CSNK1E-206ENST00000413574 SPZ1Q9BXG8 430 aa35.52■■■■□ 3.28
CSNK1E-206ENST00000413574 ST18O60284 1047 aa35.51■■■■□ 3.28
CSNK1E-206ENST00000413574 NECAB1Q8N987 351 aa35.51■■■■□ 3.28
CSNK1E-206ENST00000413574 TEX13BQ9BXU2 312 aa35.51■■■■□ 3.28
CSNK1E-206ENST00000413574 DOCK3Q8IZD9 2030 aa35.51■■■■□ 3.27
CSNK1E-206ENST00000413574 hCG_1642624A0A1W2PR95 340 aa35.5■■■■□ 3.27
CSNK1E-206ENST00000413574 ATP2A1O14983 1001 aa35.5■■■■□ 3.27
CSNK1E-206ENST00000413574 PPFIA3O75145 1194 aa35.5■■■■□ 3.27
CSNK1E-206ENST00000413574 FUT2Q10981 343 aa35.5■■■■□ 3.27
CSNK1E-206ENST00000413574 SCRN1Q12765 414 aa35.5■■■■□ 3.27
CSNK1E-206ENST00000413574 QRICH1Q2TAL8 776 aa35.5■■■■□ 3.27
CSNK1E-206ENST00000413574 MTMR8Q96EF0 704 aa35.5■■■■□ 3.27
CSNK1E-206ENST00000413574 SLKQ9H2G2 1235 aaPredicted RBP35.5■■■■□ 3.27
CSNK1E-206ENST00000413574 LIMCH1Q9UPQ0 1083 aa35.5■■■■□ 3.27
CSNK1E-206ENST00000413574 PFKFB2O60825 505 aa35.5■■■■□ 3.27
CSNK1E-206ENST00000413574 PPP2R5BQ15173 497 aa35.5■■■■□ 3.27
CSNK1E-206ENST00000413574 CCDC196A0A1B0GTZ2 297 aa35.49■■■■□ 3.27
CSNK1E-206ENST00000413574 ERCC3P19447 782 aa35.49■■■■□ 3.27
CSNK1E-206ENST00000413574 SMARCA1P28370 1054 aa35.49■■■■□ 3.27
CSNK1E-206ENST00000413574 OAZ1P54368 228 aa35.49■■■■□ 3.27
CSNK1E-206ENST00000413574 NCAPG2Q86XI2 1143 aa35.49■■■■□ 3.27
CSNK1E-206ENST00000413574 RIOX2Q8IUF8 465 aa35.49■■■■□ 3.27
CSNK1E-206ENST00000413574 CNTNAP5Q8WYK1 1306 aa35.49■■■■□ 3.27
CSNK1E-206ENST00000413574 DTNBO60941 627 aa35.48■■■■□ 3.27
CSNK1E-206ENST00000413574 ICAM1P05362 532 aa35.48■■■■□ 3.27
CSNK1E-206ENST00000413574 CCNA1P78396 465 aa35.48■■■■□ 3.27
CSNK1E-206ENST00000413574 WDR78Q5VTH9 848 aa35.48■■■■□ 3.27
CSNK1E-206ENST00000413574 HOMER2Q9NSB8 354 aa35.48■■■■□ 3.27
CSNK1E-206ENST00000413574 CCPG1Q9ULG6 757 aa35.48■■■■□ 3.27
CSNK1E-206ENST00000413574 PPP1R11O60927 126 aaPredicted RBP35.47■■■■□ 3.27
CSNK1E-206ENST00000413574 PSMC4P43686 418 aa35.47■■■■□ 3.27
CSNK1E-206ENST00000413574 NTRK3Q16288 839 aa35.47■■■■□ 3.27
CSNK1E-206ENST00000413574 TRIM47Q96LD4 638 aa35.47■■■■□ 3.27
CSNK1E-206ENST00000413574 ZBTB5O15062 677 aa35.46■■■■□ 3.27
CSNK1E-206ENST00000413574 USH1GQ495M9 461 aa35.46■■■■□ 3.27
CSNK1E-206ENST00000413574 CCAR1Q8IX12 1150 aaKnown RBP35.46■■■■□ 3.27
CSNK1E-206ENST00000413574 ALAS1P13196 640 aa35.46■■■■□ 3.27
CSNK1E-206ENST00000413574 PHKBQ93100 1093 aa35.46■■■■□ 3.27
CSNK1E-206ENST00000413574 PLXNB2O15031 1838 aa35.45■■■■□ 3.27
CSNK1E-206ENST00000413574 FMNL1O95466 1100 aaPredicted RBP35.45■■■■□ 3.27
CSNK1E-206ENST00000413574 RRP36Q96EU6 259 aaKnown RBP35.45■■■■□ 3.27
CSNK1E-206ENST00000413574 ERO1AQ96HE7 468 aa35.45■■■■□ 3.27
CSNK1E-206ENST00000413574 KIF22Q14807 665 aa35.44■■■■□ 3.26
CSNK1E-206ENST00000413574 GTF3C6Q969F1 213 aa35.44■■■■□ 3.26
CSNK1E-206ENST00000413574 V9GY48 417 aaPredicted RBP35.44■■■■□ 3.26
CSNK1E-206ENST00000413574 PNMA6FA0A0J9YX94 578 aa35.43■■■■□ 3.26
CSNK1E-206ENST00000413574 SLC25A27O95847 323 aa35.43■■■■□ 3.26
CSNK1E-206ENST00000413574 MAPK4P31152 587 aa35.43■■■■□ 3.26
CSNK1E-206ENST00000413574 ST3GAL1Q11201 340 aa35.43■■■■□ 3.26
CSNK1E-206ENST00000413574 FBXO11Q86XK2 927 aa35.43■■■■□ 3.26
CSNK1E-206ENST00000413574 SHCBP1Q8NEM2 672 aa35.43■■■■□ 3.26
CSNK1E-206ENST00000413574 CPLX1O14810 134 aa35.43■■■■□ 3.26
CSNK1E-206ENST00000413574 FCGRTP55899 365 aa35.43■■■■□ 3.26
CSNK1E-206ENST00000413574 GPR142Q7Z601 462 aa35.43■■■■□ 3.26
CSNK1E-206ENST00000413574 CWC22Q9HCG8 908 aaKnown RBP35.43■■■■□ 3.26
CSNK1E-206ENST00000413574 ZNFX1Q9P2E3 1918 aaKnown RBP35.42■■■■□ 3.26
CSNK1E-206ENST00000413574 TNPO2O14787 897 aaKnown RBP35.42■■■■□ 3.26
CSNK1E-206ENST00000413574 MUM1L1Q5H9M0 696 aa35.42■■■■□ 3.26
CSNK1E-206ENST00000413574 TRERF1Q96PN7 1200 aa35.42■■■■□ 3.26
CSNK1E-206ENST00000413574 MROH8Q9H579 483 aa35.42■■■■□ 3.26
CSNK1E-206ENST00000413574 RNF146Q9NTX7 359 aa35.42■■■■□ 3.26
CSNK1E-206ENST00000413574 IFNAR1P17181 557 aa35.41■■■■□ 3.26
CSNK1E-206ENST00000413574 AMNQ9BXJ7 453 aa35.41■■■■□ 3.26
CSNK1E-206ENST00000413574 SEC63Q9UGP8 760 aaKnown RBP35.41■■■■□ 3.26
CSNK1E-206ENST00000413574 PLEKHH3Q7Z736 793 aa35.4■■■■□ 3.26
CSNK1E-206ENST00000413574 IL27Q8NEV9 243 aa35.4■■■■□ 3.26
CSNK1E-206ENST00000413574 COA7Q96BR5 231 aa35.4■■■■□ 3.26
CSNK1E-206ENST00000413574 ZSCAN31Q96LW9 406 aaPredicted RBP35.4■■■■□ 3.26
CSNK1E-206ENST00000413574 SLC26A6Q9BXS9 759 aa35.4■■■■□ 3.26
CSNK1E-206ENST00000413574 CTDNEP1O95476 244 aa35.39■■■■□ 3.26
CSNK1E-206ENST00000413574 CCDC83Q8IWF9 413 aa35.39■■■■□ 3.26
CSNK1E-206ENST00000413574 PCDHA1Q9Y5I3 950 aa35.39■■■■□ 3.26
CSNK1E-206ENST00000413574 HTTP42858 3142 aa35.37■■■■□ 3.25
CSNK1E-206ENST00000413574 COPB2P35606 906 aa35.37■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms