RNA–Protein interactions for RNA: ENST00000411900.5

PKP4-203, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-203ENST00000411900 AKNAD1Q5T1N1 836 aa11.86□□□□□ -0.51
PKP4-203ENST00000411900 MFSD6Q6ZSS7 791 aa11.86□□□□□ -0.51
PKP4-203ENST00000411900 ARRDC4Q8NCT1 418 aa11.86□□□□□ -0.51
PKP4-203ENST00000411900 TMEM47Q9BQJ4 181 aa11.86□□□□□ -0.51
PKP4-203ENST00000411900 GPCPD1Q9NPB8 672 aa11.86□□□□□ -0.51
PKP4-203ENST00000411900 XPNPEP3Q9NQH7 507 aa11.86□□□□□ -0.51
PKP4-203ENST00000411900 RNF146Q9NTX7 359 aa11.86□□□□□ -0.51
PKP4-203ENST00000411900 ZHX1Q9UKY1 873 aaPredicted RBP11.86□□□□□ -0.51
PKP4-203ENST00000411900 PRR12Q9ULL5 1215 aa11.86□□□□□ -0.51
PKP4-203ENST00000411900 CNPY2Q9Y2B0 182 aa11.86□□□□□ -0.51
PKP4-203ENST00000411900 ATP11BQ9Y2G3 1177 aa11.86□□□□□ -0.51
PKP4-203ENST00000411900 ZMYM6O95789 1325 aa11.86□□□□□ -0.51
PKP4-203ENST00000411900 SZT2Q5T011 3432 aa11.85□□□□□ -0.51
PKP4-203ENST00000411900 ZNF213O14771 459 aa11.85□□□□□ -0.51
PKP4-203ENST00000411900 SNAI1O95863 264 aaPredicted RBP11.85□□□□□ -0.51
PKP4-203ENST00000411900 RARBP10826 455 aa11.85□□□□□ -0.51
PKP4-203ENST00000411900 TOP1P11387 765 aaKnown RBP11.85□□□□□ -0.51
PKP4-203ENST00000411900 ADCYAP1R1P41586 468 aa11.85□□□□□ -0.51
PKP4-203ENST00000411900 NOVP48745 357 aa11.85□□□□□ -0.51
PKP4-203ENST00000411900 OAZ1P54368 228 aa11.85□□□□□ -0.51
PKP4-203ENST00000411900 RTP1P59025 263 aa11.85□□□□□ -0.51
PKP4-203ENST00000411900 CNTN2Q02246 1040 aa11.85□□□□□ -0.51
PKP4-203ENST00000411900 TICAM2Q86XR7 235 aa11.85□□□□□ -0.51
PKP4-203ENST00000411900 CHST13Q8NET6 341 aa11.85□□□□□ -0.51
PKP4-203ENST00000411900 FGD4Q96M96 766 aa11.85□□□□□ -0.51
PKP4-203ENST00000411900 TRERF1Q96PN7 1200 aa11.85□□□□□ -0.51
PKP4-203ENST00000411900 GDF15Q99988 308 aa11.85□□□□□ -0.51
PKP4-203ENST00000411900 IL25Q9H293 177 aa11.85□□□□□ -0.51
PKP4-203ENST00000411900 ACAD9Q9H845 621 aa11.85□□□□□ -0.51
PKP4-203ENST00000411900 FBXO40Q9UH90 709 aa11.85□□□□□ -0.51
PKP4-203ENST00000411900 DDX49Q9Y6V7 483 aaKnown RBP11.85□□□□□ -0.51
PKP4-203ENST00000411900 LCTP09848 1927 aa11.85□□□□□ -0.51
PKP4-203ENST00000411900 SOX1O00570 391 aaPredicted RBP11.84□□□□□ -0.51
PKP4-203ENST00000411900 AKR1A1P14550 325 aa11.84□□□□□ -0.51
PKP4-203ENST00000411900 GSPT1P15170 499 aaKnown RBP11.84□□□□□ -0.51
PKP4-203ENST00000411900 IRX5P78411 483 aaPredicted RBP11.84□□□□□ -0.51
PKP4-203ENST00000411900 TRIM60Q495X7 471 aa11.84□□□□□ -0.51
PKP4-203ENST00000411900 MUM1L1Q5H9M0 696 aa11.84□□□□□ -0.51
PKP4-203ENST00000411900 SLC39A5Q6ZMH5 540 aa11.84□□□□□ -0.51
PKP4-203ENST00000411900 DCAF4Q8WV16 495 aa11.84□□□□□ -0.51
PKP4-203ENST00000411900 UBE2OQ9C0C9 1292 aaKnown RBP11.84□□□□□ -0.51
PKP4-203ENST00000411900 A1CFQ9NQ94 594 aaKnown RBP11.84□□□□□ -0.51
PKP4-203ENST00000411900 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.84□□□□□ -0.51
PKP4-203ENST00000411900 NRBP1Q9UHY1 535 aa11.84□□□□□ -0.51
PKP4-203ENST00000411900 CCPG1Q9ULG6 757 aa11.84□□□□□ -0.51
PKP4-203ENST00000411900 SYNGAP1Q96PV0 1343 aa11.84□□□□□ -0.51
PKP4-203ENST00000411900 LTBP2Q14767 1821 aa11.83□□□□□ -0.51
PKP4-203ENST00000411900 LRRC37A2A6NM11 1700 aa11.83□□□□□ -0.52
PKP4-203ENST00000411900 B4E1Z4 1266 aa11.83□□□□□ -0.52
PKP4-203ENST00000411900 POTEB2H3BUK9 544 aa11.83□□□□□ -0.52
PKP4-203ENST00000411900 HIP1O00291 1037 aa11.83□□□□□ -0.52
PKP4-203ENST00000411900 PLA2G6O60733 806 aa11.83□□□□□ -0.52
PKP4-203ENST00000411900 FDX1P10109 184 aa11.83□□□□□ -0.52
PKP4-203ENST00000411900 PDHBP11177 359 aa11.83□□□□□ -0.52
PKP4-203ENST00000411900 ACVR2BQ13705 512 aa11.83□□□□□ -0.52
PKP4-203ENST00000411900 TTC22Q5TAA0 569 aa11.83□□□□□ -0.52
PKP4-203ENST00000411900 SYDE2Q5VT97 1194 aa11.83□□□□□ -0.52
PKP4-203ENST00000411900 MAMDC4Q6UXC1 1216 aa11.83□□□□□ -0.52
PKP4-203ENST00000411900 ARMCX2Q7L311 632 aa11.83□□□□□ -0.52
PKP4-203ENST00000411900 RNF180Q86T96 592 aa11.83□□□□□ -0.52
PKP4-203ENST00000411900 CCDC144CPQ8IYA2 1237 aa11.83□□□□□ -0.52
PKP4-203ENST00000411900 ESR2Q92731 530 aa11.83□□□□□ -0.52
PKP4-203ENST00000411900 LRCH3Q96II8 777 aa11.83□□□□□ -0.52
PKP4-203ENST00000411900 PURBQ96QR8 312 aaKnown RBP11.83□□□□□ -0.52
PKP4-203ENST00000411900 RNF41Q9H4P4 317 aaPredicted RBP11.83□□□□□ -0.52
PKP4-203ENST00000411900 PRDM5Q9NQX1 630 aaPredicted RBP11.83□□□□□ -0.52
PKP4-203ENST00000411900 TCP11L1Q9NUJ3 509 aa11.83□□□□□ -0.52
PKP4-203ENST00000411900 FAM184BQ9ULE4 1060 aa11.83□□□□□ -0.52
PKP4-203ENST00000411900 SYNRGQ9UMZ2 1314 aa11.83□□□□□ -0.52
PKP4-203ENST00000411900 LAMA3Q16787 3333 aa11.82□□□□□ -0.52
PKP4-203ENST00000411900 MYADML2A6NDP7 307 aa11.82□□□□□ -0.52
PKP4-203ENST00000411900 SOWAHBA6NEL2 793 aa11.82□□□□□ -0.52
PKP4-203ENST00000411900 ADCY6O43306 1168 aa11.82□□□□□ -0.52
PKP4-203ENST00000411900 KDM4AO75164 1064 aa11.82□□□□□ -0.52
PKP4-203ENST00000411900 GOLGA8HP0CJ92 632 aa11.82□□□□□ -0.52
PKP4-203ENST00000411900 BMP8BP34820 402 aa11.82□□□□□ -0.52
PKP4-203ENST00000411900 TKFCQ3LXA3 575 aa11.82□□□□□ -0.52
PKP4-203ENST00000411900 NSMFQ6X4W1 530 aa11.82□□□□□ -0.52
PKP4-203ENST00000411900 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.82□□□□□ -0.523e-7■■■■□ 25.5
PKP4-203ENST00000411900 ZNF467Q7Z7K2 595 aaPredicted RBP11.82□□□□□ -0.52
PKP4-203ENST00000411900 MSL3Q8N5Y2 521 aaKnown RBP11.82□□□□□ -0.52
PKP4-203ENST00000411900 CCDC136Q96JN2 1154 aa11.82□□□□□ -0.52
PKP4-203ENST00000411900 RANBP17Q9H2T7 1088 aaKnown RBP11.82□□□□□ -0.52
PKP4-203ENST00000411900 CPVLQ9H3G5 476 aa11.82□□□□□ -0.52
PKP4-203ENST00000411900 MYH6P13533 1939 aa11.82□□□□□ -0.52
PKP4-203ENST00000411900 ADAMTS4O75173 837 aa11.81□□□□□ -0.52
PKP4-203ENST00000411900 ICAM1P05362 532 aa11.81□□□□□ -0.52
PKP4-203ENST00000411900 PCP11498 1178 aaKnown RBP11.81□□□□□ -0.52
PKP4-203ENST00000411900 PTGS1P23219 599 aa11.81□□□□□ -0.52
PKP4-203ENST00000411900 IMMTQ16891 758 aaKnown RBP11.81□□□□□ -0.52
PKP4-203ENST00000411900 CCDC144BQ3MJ40 725 aa11.81□□□□□ -0.52
PKP4-203ENST00000411900 EEPD1Q7L9B9 569 aa11.81□□□□□ -0.52
PKP4-203ENST00000411900 SH3RF1Q7Z6J0 888 aa11.81□□□□□ -0.52
PKP4-203ENST00000411900 FAM133AQ8N9E0 248 aa11.81□□□□□ -0.52
PKP4-203ENST00000411900 TTC14Q96N46 770 aa11.81□□□□□ -0.52
PKP4-203ENST00000411900 LBHD1Q9BQE6 289 aaPredicted RBP11.81□□□□□ -0.52
PKP4-203ENST00000411900 DSCC1Q9BVC3 393 aa11.81□□□□□ -0.52
PKP4-203ENST00000411900 CYP39A1Q9NYL5 469 aa11.81□□□□□ -0.52
PKP4-203ENST00000411900 PRKAG2Q9UGJ0 569 aa11.81□□□□□ -0.52
PKP4-203ENST00000411900 PHF24Q9UPV7 400 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms