RNA–Protein interactions for RNA: ENST00000411792.1

RFC4-203, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-203ENST00000411792 ASPRV1Q53RT3 343 aa21.36■■□□□ 1.01
RFC4-203ENST00000411792 ANKRD35Q8N283 1001 aa21.36■■□□□ 1.01
RFC4-203ENST00000411792 ACAD9Q9H845 621 aa21.36■■□□□ 1.01
RFC4-203ENST00000411792 FLRT1Q9NZU1 646 aa21.36■■□□□ 1.01
RFC4-203ENST00000411792 PNMA2Q9UL42 364 aa21.36■■□□□ 1.01
RFC4-203ENST00000411792 CCPG1Q9ULG6 757 aa21.36■■□□□ 1.01
RFC4-203ENST00000411792 COL11A1P12107 1806 aaPredicted RBP21.35■■□□□ 1.01
RFC4-203ENST00000411792 SLC27A2O14975 620 aa21.35■■□□□ 1.01
RFC4-203ENST00000411792 PGK2P07205 417 aa21.35■■□□□ 1.01
RFC4-203ENST00000411792 PARP1P09874 1014 aaKnown RBP21.35■■□□□ 1.01
RFC4-203ENST00000411792 ALAS1P13196 640 aa21.35■■□□□ 1.01
RFC4-203ENST00000411792 SNAP25P60880 206 aa21.35■■□□□ 1.01
RFC4-203ENST00000411792 WTAPQ15007 396 aa21.35■■□□□ 1.01
RFC4-203ENST00000411792 CREB3L3Q68CJ9 461 aa21.35■■□□□ 1.01
RFC4-203ENST00000411792 DPF3Q92784 378 aa21.35■■□□□ 1.01
RFC4-203ENST00000411792 RANBP17Q9H2T7 1088 aaKnown RBP21.35■■□□□ 1.01
RFC4-203ENST00000411792 RNF146Q9NTX7 359 aa21.35■■□□□ 1.01
RFC4-203ENST00000411792 DIS3Q9Y2L1 958 aaKnown RBP21.35■■□□□ 1.01
RFC4-203ENST00000411792 BRCA2P51587 3418 aa21.35■■□□□ 1.01
RFC4-203ENST00000411792 ICAM1P05362 532 aa21.34■■□□□ 1.01
RFC4-203ENST00000411792 GOLGA8HP0CJ92 632 aa21.34■■□□□ 1.01
RFC4-203ENST00000411792 CNGA1P29973 690 aa21.34■■□□□ 1.01
RFC4-203ENST00000411792 CYP2C19P33261 490 aa21.34■■□□□ 1.01
RFC4-203ENST00000411792 TMEM67Q5HYA8 995 aa21.34■■□□□ 1.01
RFC4-203ENST00000411792 STOX1Q6ZVD7 989 aa21.34■■□□□ 1.01
RFC4-203ENST00000411792 MAML3Q96JK9 1138 aa21.34■■□□□ 1.01
RFC4-203ENST00000411792 AGBL1Q96MI9 1066 aa21.34■■□□□ 1.01
RFC4-203ENST00000411792 TAF6LQ9Y6J9 622 aa21.34■■□□□ 1.01
RFC4-203ENST00000411792 ZNF536O15090 1300 aa21.33■■□□□ 1.01
RFC4-203ENST00000411792 DHX16O60231 1041 aaKnown RBP21.33■■□□□ 1.01
RFC4-203ENST00000411792 NECTIN1Q15223 517 aa21.33■■□□□ 1.01
RFC4-203ENST00000411792 SEC23AQ15436 765 aa21.33■■□□□ 1.01
RFC4-203ENST00000411792 TRERF1Q96PN7 1200 aa21.33■■□□□ 1.01
RFC4-203ENST00000411792 HTATIP2Q9BUP3 242 aa21.33■■□□□ 1.01
RFC4-203ENST00000411792 CCND3P30281 292 aaPredicted RBP21.32■■□□□ 1
RFC4-203ENST00000411792 MCM5P33992 734 aa21.32■■□□□ 1
RFC4-203ENST00000411792 ZNF792Q3KQV3 632 aa21.32■■□□□ 1
RFC4-203ENST00000411792 CHST3Q7LGC8 479 aa21.32■■□□□ 1
RFC4-203ENST00000411792 MB21D2Q8IYB1 491 aaPredicted RBP21.32■■□□□ 1
RFC4-203ENST00000411792 MSCO60682 206 aa21.31■■□□□ 1
RFC4-203ENST00000411792 REC8O95072 547 aa21.31■■□□□ 1
RFC4-203ENST00000411792 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.31■■□□□ 1
RFC4-203ENST00000411792 CATIPQ7Z7H3 387 aa21.31■■□□□ 1
RFC4-203ENST00000411792 CRISPLD2Q9H0B8 497 aa21.31■■□□□ 1
RFC4-203ENST00000411792 PFASO15067 1338 aa21.3■■□□□ 1
RFC4-203ENST00000411792 PRC1O43663 620 aa21.3■■□□□ 1
RFC4-203ENST00000411792 MSL3Q8N5Y2 521 aaKnown RBP21.3■■□□□ 1
RFC4-203ENST00000411792 TMEM87BQ96K49 555 aa21.3■■□□□ 1
RFC4-203ENST00000411792 TINF2Q9BSI4 451 aa21.3■■□□□ 1
RFC4-203ENST00000411792 MTA3Q9BTC8 594 aa21.3■■□□□ 1
RFC4-203ENST00000411792 UBA5Q9GZZ9 404 aa21.3■■□□□ 1
RFC4-203ENST00000411792 MKI67P46013 3256 aaKnown RBP21.29■■□□□ 1
RFC4-203ENST00000411792 DNAJC25-GNG10A0A024R161 153 aa21.29■■□□□ 1
RFC4-203ENST00000411792 POTEB2H3BUK9 544 aa21.29■■□□□ 1
RFC4-203ENST00000411792 CYBAP13498 195 aa21.29■■□□□ 1
RFC4-203ENST00000411792 NFXL1Q6ZNB6 911 aa21.29■■□□□ 1
RFC4-203ENST00000411792 ANKLE1Q8NAG6 615 aa21.29■■□□□ 1
RFC4-203ENST00000411792 PAWRQ96IZ0 340 aaKnown RBP21.29■■□□□ 1
RFC4-203ENST00000411792 DDX20Q9UHI6 824 aaKnown RBP21.29■■□□□ 1
RFC4-203ENST00000411792 NRBP1Q9UHY1 535 aa21.29■■□□□ 1
RFC4-203ENST00000411792 CNPY2Q9Y2B0 182 aa21.29■■□□□ 1
RFC4-203ENST00000411792 WDR19Q8NEZ3 1342 aa21.29■■□□□ 1
RFC4-203ENST00000411792 ANTXR2P58335 489 aa21.28■■□□□ 1
RFC4-203ENST00000411792 KRT32Q14532 448 aa21.28■■□□□ 1
RFC4-203ENST00000411792 CDC37Q16543 378 aaPredicted RBP21.28■■□□□ 1
RFC4-203ENST00000411792 NSMFQ6X4W1 530 aa21.28■■□□□ 1
RFC4-203ENST00000411792 UBE2Q1Q7Z7E8 422 aa21.28■■□□□ 1
RFC4-203ENST00000411792 ZNF467Q7Z7K2 595 aaPredicted RBP21.28■■□□□ 1
RFC4-203ENST00000411792 TMTC2Q8N394 836 aa21.28■■□□□ 1
RFC4-203ENST00000411792 DIS3LQ8TF46 1054 aaKnown RBP21.28■■□□□ 1
RFC4-203ENST00000411792 CPVLQ9H3G5 476 aa21.28■■□□□ 1
RFC4-203ENST00000411792 A1CFQ9NQ94 594 aaKnown RBP21.28■■□□□ 1
RFC4-203ENST00000411792 MUM1L1Q5H9M0 696 aa21.27■■□□□ 1
RFC4-203ENST00000411792 NECAB2Q7Z6G3 386 aa21.27■■□□□ 1
RFC4-203ENST00000411792 ADGRF4Q8IZF3 695 aa21.27■■□□□ 1
RFC4-203ENST00000411792 IGDCC4Q8TDY8 1250 aa21.27■■□□□ 1
RFC4-203ENST00000411792 NEK1Q96PY6 1258 aa21.27■■□□□ 1
RFC4-203ENST00000411792 VAT1LQ9HCJ6 419 aa21.27■■□□□ 1
RFC4-203ENST00000411792 OGDHLQ9ULD0 1010 aa21.27■■□□□ 1
RFC4-203ENST00000411792 SYNGAP1Q96PV0 1343 aa21.27■□□□□ 0.99
RFC4-203ENST00000411792 CCDC69A6NI79 296 aa21.26■□□□□ 0.99
RFC4-203ENST00000411792 KLRF2D3W0D1 207 aa21.26■□□□□ 0.99
RFC4-203ENST00000411792 SEPT4O43236 478 aa21.26■□□□□ 0.99
RFC4-203ENST00000411792 IGHA2P01877 340 aa21.26■□□□□ 0.99
RFC4-203ENST00000411792 GRM4Q14833 912 aa21.26■□□□□ 0.99
RFC4-203ENST00000411792 USH1GQ495M9 461 aa21.26■□□□□ 0.99
RFC4-203ENST00000411792 PRAMEF19Q5SWL8 479 aa21.26■□□□□ 0.99
RFC4-203ENST00000411792 NUP133Q8WUM0 1156 aa21.26■□□□□ 0.99
RFC4-203ENST00000411792 ZNFX1Q9P2E3 1918 aaKnown RBP21.25■□□□□ 0.99
RFC4-203ENST00000411792 PTPDC1A2A3K4 754 aa21.25■□□□□ 0.99
RFC4-203ENST00000411792 DDAH1O94760 285 aa21.25■□□□□ 0.99
RFC4-203ENST00000411792 TAL1P17542 331 aaPredicted RBP21.25■□□□□ 0.99
RFC4-203ENST00000411792 MAMDC4Q6UXC1 1216 aa21.25■□□□□ 0.99
RFC4-203ENST00000411792 STAG2Q8N3U4 1231 aa21.25■□□□□ 0.99
RFC4-203ENST00000411792 TRPV1Q8NER1 839 aa21.25■□□□□ 0.99
RFC4-203ENST00000411792 CTCFLQ8NI51 663 aaPredicted RBP21.25■□□□□ 0.99
RFC4-203ENST00000411792 LY9Q9HBG7 655 aa21.25■□□□□ 0.99
RFC4-203ENST00000411792 SENP2Q9HC62 589 aa21.25■□□□□ 0.99
RFC4-203ENST00000411792 H0YGN5 161 aa21.24■□□□□ 0.99
RFC4-203ENST00000411792 KIF5BP33176 963 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms