RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 RIPK3Q9Y572 518 aa17.14■□□□□ 0.33
NIF3L1-205ENST00000409588 SYNGAP1Q96PV0 1343 aa17.14■□□□□ 0.33
NIF3L1-205ENST00000409588 MYH4Q9Y623 1939 aa17.13■□□□□ 0.33
NIF3L1-205ENST00000409588 PGK2P07205 417 aa17.13■□□□□ 0.33
NIF3L1-205ENST00000409588 BMP8BP34820 402 aa17.13■□□□□ 0.33
NIF3L1-205ENST00000409588 BTNL9Q6UXG8 535 aa17.13■□□□□ 0.33
NIF3L1-205ENST00000409588 DGKHQ86XP1 1220 aa17.13■□□□□ 0.33
NIF3L1-205ENST00000409588 RAVER2Q9HCJ3 691 aaKnown RBP17.13■□□□□ 0.33
NIF3L1-205ENST00000409588 INCENPQ9NQS7 918 aa17.13■□□□□ 0.33
NIF3L1-205ENST00000409588 CEP290O15078 2479 aa17.13■□□□□ 0.33
NIF3L1-205ENST00000409588 KBTBD13C9JR72 458 aa17.12■□□□□ 0.33
NIF3L1-205ENST00000409588 IMMTQ16891 758 aaKnown RBP17.12■□□□□ 0.33
NIF3L1-205ENST00000409588 RRP12Q5JTH9 1297 aaKnown RBP17.12■□□□□ 0.33
NIF3L1-205ENST00000409588 RUFY2Q8WXA3 655 aa17.12■□□□□ 0.33
NIF3L1-205ENST00000409588 SENP6Q9GZR1 1112 aaPredicted RBP17.12■□□□□ 0.33
NIF3L1-205ENST00000409588 PRO3102Q9H379 93 aa17.12■□□□□ 0.33
NIF3L1-205ENST00000409588 ACAD9Q9H845 621 aa17.12■□□□□ 0.33
NIF3L1-205ENST00000409588 ISY1Q9ULR0 285 aaKnown RBP17.12■□□□□ 0.33
NIF3L1-205ENST00000409588 PFASO15067 1338 aa17.12■□□□□ 0.33
NIF3L1-205ENST00000409588 ZNFX1Q9P2E3 1918 aaKnown RBP17.11■□□□□ 0.33
NIF3L1-205ENST00000409588 NMT2O60551 498 aa17.11■□□□□ 0.33
NIF3L1-205ENST00000409588 RARBP10826 455 aa17.11■□□□□ 0.33
NIF3L1-205ENST00000409588 AKR1A1P14550 325 aa17.11■□□□□ 0.33
NIF3L1-205ENST00000409588 IQCA1Q86XH1 822 aa17.11■□□□□ 0.33
NIF3L1-205ENST00000409588 TMEM47Q9BQJ4 181 aa17.11■□□□□ 0.33
NIF3L1-205ENST00000409588 ABHD16BQ9H3Z7 469 aa17.11■□□□□ 0.33
NIF3L1-205ENST00000409588 CNNM2Q9H8M5 875 aa17.11■□□□□ 0.33
NIF3L1-205ENST00000409588 COL11A1P12107 1806 aaPredicted RBP17.11■□□□□ 0.33
NIF3L1-205ENST00000409588 PRAMEF19Q5SWL8 479 aa17.1■□□□□ 0.33
NIF3L1-205ENST00000409588 TTC22Q5TAA0 569 aa17.1■□□□□ 0.33
NIF3L1-205ENST00000409588 C1orf53Q5VUE5 145 aa17.1■□□□□ 0.33
NIF3L1-205ENST00000409588 KCTD1Q719H9 257 aa17.1■□□□□ 0.33
NIF3L1-205ENST00000409588 RNF180Q86T96 592 aa17.1■□□□□ 0.33
NIF3L1-205ENST00000409588 C7orf61Q8IZ16 206 aa17.1■□□□□ 0.33
NIF3L1-205ENST00000409588 ANKS1AQ92625 1134 aa17.1■□□□□ 0.33
NIF3L1-205ENST00000409588 KRT23Q9C075 422 aa17.1■□□□□ 0.33
NIF3L1-205ENST00000409588 MAF1Q9H063 256 aa17.1■□□□□ 0.33
NIF3L1-205ENST00000409588 RBM27Q9P2N5 1060 aaKnown RBP17.1■□□□□ 0.33
NIF3L1-205ENST00000409588 FAM184BQ9ULE4 1060 aa17.1■□□□□ 0.33
NIF3L1-205ENST00000409588 PRR12Q9ULL5 1215 aa17.1■□□□□ 0.33
NIF3L1-205ENST00000409588 TACC3Q9Y6A5 838 aa17.1■□□□□ 0.33
NIF3L1-205ENST00000409588 ZNF865P0CJ78 1059 aaPredicted RBP17.09■□□□□ 0.33
NIF3L1-205ENST00000409588 SLC4A3P48751 1232 aa17.09■□□□□ 0.33
NIF3L1-205ENST00000409588 HAND2P61296 217 aa17.09■□□□□ 0.33
NIF3L1-205ENST00000409588 GPATCH4Q5T3I0 446 aaKnown RBP17.09■□□□□ 0.33
NIF3L1-205ENST00000409588 TRERF1Q96PN7 1200 aa17.09■□□□□ 0.33
NIF3L1-205ENST00000409588 TSEN34Q9BSV6 310 aaKnown RBP17.09■□□□□ 0.33
NIF3L1-205ENST00000409588 RAD50Q92878 1312 aa17.09■□□□□ 0.33
NIF3L1-205ENST00000409588 ZNF536O15090 1300 aa17.08■□□□□ 0.32
NIF3L1-205ENST00000409588 LOC102724159A0A0B4J2E5 919 aa17.08■□□□□ 0.32
NIF3L1-205ENST00000409588 ASB14A6NK59 587 aa17.08■□□□□ 0.32
NIF3L1-205ENST00000409588 ICAM1P05362 532 aa17.08■□□□□ 0.32
NIF3L1-205ENST00000409588 FXR1P51114 621 aaKnown RBP eCLIP17.08■□□□□ 0.32
NIF3L1-205ENST00000409588 PWP2Q15269 919 aaKnown RBP17.08■□□□□ 0.32
NIF3L1-205ENST00000409588 CCDC96Q2M329 555 aa17.08■□□□□ 0.32
NIF3L1-205ENST00000409588 GDF15Q99988 308 aa17.08■□□□□ 0.32
NIF3L1-205ENST00000409588 TSPYL2Q9H2G4 693 aaPredicted RBP17.08■□□□□ 0.32
NIF3L1-205ENST00000409588 XPNPEP3Q9NQH7 507 aa17.08■□□□□ 0.32
NIF3L1-205ENST00000409588 SNAI1O95863 264 aaPredicted RBP17.07■□□□□ 0.32
NIF3L1-205ENST00000409588 SNHG28P0DPA3 235 aa17.07■□□□□ 0.32
NIF3L1-205ENST00000409588 LRRC41Q15345 812 aa17.07■□□□□ 0.32
NIF3L1-205ENST00000409588 LRRC26Q2I0M4 334 aa17.07■□□□□ 0.32
NIF3L1-205ENST00000409588 GJC2Q5T442 439 aaPredicted RBP17.07■□□□□ 0.32
NIF3L1-205ENST00000409588 ASTLQ6HA08 431 aaPredicted RBP17.07■□□□□ 0.32
NIF3L1-205ENST00000409588 SLC39A5Q6ZMH5 540 aa17.07■□□□□ 0.32
NIF3L1-205ENST00000409588 FAM133AQ8N9E0 248 aa17.07■□□□□ 0.32
NIF3L1-205ENST00000409588 AGBL1Q96MI9 1066 aa17.07■□□□□ 0.32
NIF3L1-205ENST00000409588 RANBP17Q9H2T7 1088 aaKnown RBP17.07■□□□□ 0.32
NIF3L1-205ENST00000409588 RNF146Q9NTX7 359 aa17.07■□□□□ 0.32
NIF3L1-205ENST00000409588 PRKAG2Q9UGJ0 569 aa17.07■□□□□ 0.32
NIF3L1-205ENST00000409588 DUSP11O75319 330 aaKnown RBP17.06■□□□□ 0.32
NIF3L1-205ENST00000409588 PDHBP11177 359 aa17.06■□□□□ 0.32
NIF3L1-205ENST00000409588 ALAS1P13196 640 aa17.06■□□□□ 0.32
NIF3L1-205ENST00000409588 PDE4AP27815 886 aa17.06■□□□□ 0.32
NIF3L1-205ENST00000409588 ACVR2BQ13705 512 aa17.06■□□□□ 0.32
NIF3L1-205ENST00000409588 SYDE2Q5VT97 1194 aa17.06■□□□□ 0.32
NIF3L1-205ENST00000409588 TBC1D10CQ8IV04 446 aa17.06■□□□□ 0.32
NIF3L1-205ENST00000409588 SPC25Q9HBM1 224 aa17.06■□□□□ 0.32
NIF3L1-205ENST00000409588 A1CFQ9NQ94 594 aaKnown RBP17.06■□□□□ 0.32
NIF3L1-205ENST00000409588 CCPG1Q9ULG6 757 aa17.06■□□□□ 0.32
NIF3L1-205ENST00000409588 PHF24Q9UPV7 400 aa17.06■□□□□ 0.32
NIF3L1-205ENST00000409588 ZNF543Q08ER8 600 aa17.05■□□□□ 0.32
NIF3L1-205ENST00000409588 TRDNQ13061 729 aa17.05■□□□□ 0.32
NIF3L1-205ENST00000409588 SNX17Q15036 470 aa17.05■□□□□ 0.32
NIF3L1-205ENST00000409588 NUP133Q8WUM0 1156 aa17.05■□□□□ 0.32
NIF3L1-205ENST00000409588 ZSCAN10Q96SZ4 725 aaPredicted RBP17.05■□□□□ 0.32
NIF3L1-205ENST00000409588 KAT14Q9H8E8 782 aa17.05■□□□□ 0.32
NIF3L1-205ENST00000409588 HOMER2Q9NSB8 354 aa17.05■□□□□ 0.32
NIF3L1-205ENST00000409588 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.05■□□□□ 0.32
NIF3L1-205ENST00000409588 ZSWIM5Q9P217 1185 aa17.05■□□□□ 0.32
NIF3L1-205ENST00000409588 ADD3Q9UEY8 706 aaKnown RBP17.05■□□□□ 0.32
NIF3L1-205ENST00000409588 MOXD2PA6NHM9 499 aa17.04■□□□□ 0.32
NIF3L1-205ENST00000409588 ATMINO43313 823 aaPredicted RBP17.04■□□□□ 0.32
NIF3L1-205ENST00000409588 KDM4AO75164 1064 aa17.04■□□□□ 0.32
NIF3L1-205ENST00000409588 GSPT1P15170 499 aaKnown RBP17.04■□□□□ 0.32
NIF3L1-205ENST00000409588 TAL1P17542 331 aaPredicted RBP17.04■□□□□ 0.32
NIF3L1-205ENST00000409588 ADCYAP1R1P41586 468 aa17.04■□□□□ 0.32
NIF3L1-205ENST00000409588 CCDC174Q6PII3 467 aa17.04■□□□□ 0.32
NIF3L1-205ENST00000409588 ARMCX2Q7L311 632 aa17.04■□□□□ 0.32
NIF3L1-205ENST00000409588 PCSK9Q8NBP7 692 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms