RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 TFF2Q03403 129 aa20.04■□□□□ 0.8
CHMP3-203ENST00000409225 ARMCX2Q7L311 632 aa20.04■□□□□ 0.8
CHMP3-203ENST00000409225 ANKRD35Q8N283 1001 aa20.04■□□□□ 0.8
CHMP3-203ENST00000409225 DDRGK1Q96HY6 314 aa20.04■□□□□ 0.8
CHMP3-203ENST00000409225 FGD4Q96M96 766 aa20.04■□□□□ 0.8
CHMP3-203ENST00000409225 C1QTNF1Q9BXJ1 281 aa20.04■□□□□ 0.8
CHMP3-203ENST00000409225 RAVER2Q9HCJ3 691 aaKnown RBP20.04■□□□□ 0.8
CHMP3-203ENST00000409225 MCM3APO60318 1980 aa20.03■□□□□ 0.8
CHMP3-203ENST00000409225 CTAGE5O15320 804 aa20.03■□□□□ 0.8
CHMP3-203ENST00000409225 ZBED4O75132 1171 aa20.03■□□□□ 0.8
CHMP3-203ENST00000409225 IFIT2P09913 472 aaKnown RBP20.03■□□□□ 0.8
CHMP3-203ENST00000409225 BMP1P13497 986 aa20.03■□□□□ 0.8
CHMP3-203ENST00000409225 CCL23P55773 120 aa20.03■□□□□ 0.8
CHMP3-203ENST00000409225 PPP2R2DQ66LE6 453 aa20.03■□□□□ 0.8
CHMP3-203ENST00000409225 PRPF38AQ8NAV1 312 aaKnown RBP20.03■□□□□ 0.8
CHMP3-203ENST00000409225 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.03■□□□□ 0.8
CHMP3-203ENST00000409225 PAG1Q9NWQ8 432 aa20.03■□□□□ 0.8
CHMP3-203ENST00000409225 SLC4A4Q9Y6R1 1079 aa20.03■□□□□ 0.8
CHMP3-203ENST00000409225 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.02■□□□□ 0.8
CHMP3-203ENST00000409225 NDUFB10O96000 172 aa20.02■□□□□ 0.8
CHMP3-203ENST00000409225 CHGBP05060 677 aa20.02■□□□□ 0.8
CHMP3-203ENST00000409225 MYOGP15173 224 aa20.02■□□□□ 0.8
CHMP3-203ENST00000409225 SKIV2LQ15477 1246 aaKnown RBP20.02■□□□□ 0.8
CHMP3-203ENST00000409225 HSP90AB4PQ58FF6 505 aa20.02■□□□□ 0.8
CHMP3-203ENST00000409225 CTR9Q6PD62 1173 aa20.02■□□□□ 0.8
CHMP3-203ENST00000409225 CXCL17Q6UXB2 119 aa20.02■□□□□ 0.8
CHMP3-203ENST00000409225 NOL8Q76FK4 1167 aaKnown RBP20.02■□□□□ 0.8
CHMP3-203ENST00000409225 CCDC144CPQ8IYA2 1237 aa20.02■□□□□ 0.8
CHMP3-203ENST00000409225 CLASRPQ8N2M8 674 aaKnown RBP20.02■□□□□ 0.8
CHMP3-203ENST00000409225 KIFC2Q96AC6 838 aa20.02■□□□□ 0.8
CHMP3-203ENST00000409225 CHD7Q9P2D1 2997 aa20.01■□□□□ 0.79
CHMP3-203ENST00000409225 F5H6K3 240 aa20.01■□□□□ 0.79
CHMP3-203ENST00000409225 ATP2A1O14983 1001 aa20.01■□□□□ 0.79
CHMP3-203ENST00000409225 KCNQ1P51787 676 aa20.01■□□□□ 0.79
CHMP3-203ENST00000409225 KLRC3Q07444 240 aa20.01■□□□□ 0.79
CHMP3-203ENST00000409225 STK11IPQ8N1F8 1099 aa20.01■□□□□ 0.79
CHMP3-203ENST00000409225 SLC43A3Q8NBI5 491 aa20.01■□□□□ 0.79
CHMP3-203ENST00000409225 BOLA2Q9H3K6 86 aa20.01■□□□□ 0.79
CHMP3-203ENST00000409225 SLC4A7Q9Y6M7 1214 aa20.01■□□□□ 0.79
CHMP3-203ENST00000409225 ZBED9Q6R2W3 1325 aa20.01■□□□□ 0.79
CHMP3-203ENST00000409225 ZBBXA8MT70 800 aa20■□□□□ 0.79
CHMP3-203ENST00000409225 TNFAIP2Q03169 654 aa20■□□□□ 0.79
CHMP3-203ENST00000409225 AAK1Q2M2I8 961 aa20■□□□□ 0.79
CHMP3-203ENST00000409225 NOC4LQ9BVI4 516 aaKnown RBP20■□□□□ 0.79
CHMP3-203ENST00000409225 DDX24Q9GZR7 859 aaKnown RBP eCLIP20■□□□□ 0.79
CHMP3-203ENST00000409225 KATNBL1Q9H079 304 aa20■□□□□ 0.79
CHMP3-203ENST00000409225 HOMER2Q9NSB8 354 aa20■□□□□ 0.79
CHMP3-203ENST00000409225 FBXO40Q9UH90 709 aa20■□□□□ 0.79
CHMP3-203ENST00000409225 ASTN1O14525 1302 aa20■□□□□ 0.79
CHMP3-203ENST00000409225 HOXD11P31277 338 aaPredicted RBP19.99■□□□□ 0.79
CHMP3-203ENST00000409225 CNTN2Q02246 1040 aa19.99■□□□□ 0.79
CHMP3-203ENST00000409225 ITGA7Q13683 1181 aa19.99■□□□□ 0.79
CHMP3-203ENST00000409225 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.99■□□□□ 0.79
CHMP3-203ENST00000409225 CHST13Q8NET6 341 aa19.99■□□□□ 0.79
CHMP3-203ENST00000409225 TRPV6Q9H1D0 765 aa19.99■□□□□ 0.79
CHMP3-203ENST00000409225 WNT8AQ9H1J5 351 aa19.99■□□□□ 0.79
CHMP3-203ENST00000409225 SLC38A10Q9HBR0 1119 aa19.99■□□□□ 0.79
CHMP3-203ENST00000409225 NYAP2Q9P242 653 aa19.99■□□□□ 0.79
CHMP3-203ENST00000409225 PCDHA11Q9Y5I1 949 aa19.99■□□□□ 0.79
CHMP3-203ENST00000409225 GREB1LQ9C091 1923 aaPredicted RBP19.98■□□□□ 0.79
CHMP3-203ENST00000409225 CABYRO75952 493 aa19.98■□□□□ 0.79
CHMP3-203ENST00000409225 RASA1P20936 1047 aa19.98■□□□□ 0.79
CHMP3-203ENST00000409225 PTGS1P23219 599 aa19.98■□□□□ 0.79
CHMP3-203ENST00000409225 NKX3-2P78367 333 aa19.98■□□□□ 0.79
CHMP3-203ENST00000409225 TLK2Q86UE8 772 aa19.98■□□□□ 0.79
CHMP3-203ENST00000409225 KIF1BPQ96EK5 621 aa19.98■□□□□ 0.79
CHMP3-203ENST00000409225 SCLYQ96I15 445 aa19.98■□□□□ 0.79
CHMP3-203ENST00000409225 ARPP21Q9UBL0 812 aaPredicted RBP19.98■□□□□ 0.79
CHMP3-203ENST00000409225 CLIP2Q9UDT6 1046 aa19.98■□□□□ 0.79
CHMP3-203ENST00000409225 GRIN2DO15399 1336 aa19.98■□□□□ 0.79
CHMP3-203ENST00000409225 RFXAPO00287 272 aa19.97■□□□□ 0.79
CHMP3-203ENST00000409225 B4GALT4O60513 344 aa19.97■□□□□ 0.79
CHMP3-203ENST00000409225 ATP2A2P16615 1042 aaKnown RBP19.97■□□□□ 0.79
CHMP3-203ENST00000409225 FSCN1Q16658 493 aaKnown RBP19.97■□□□□ 0.79
CHMP3-203ENST00000409225 RPUSD2Q8IZ73 545 aaKnown RBP19.97■□□□□ 0.79
CHMP3-203ENST00000409225 AP5M1Q9H0R1 490 aa19.97■□□□□ 0.79
CHMP3-203ENST00000409225 MKNK2Q9HBH9 465 aa19.97■□□□□ 0.79
CHMP3-203ENST00000409225 XIRP2A4UGR9 3374 aa19.97■□□□□ 0.79
CHMP3-203ENST00000409225 REV3LO60673 3130 aa19.96■□□□□ 0.79
CHMP3-203ENST00000409225 ERC2O15083 957 aa19.96■□□□□ 0.79
CHMP3-203ENST00000409225 PSMC6P62333 389 aa19.96■□□□□ 0.79
CHMP3-203ENST00000409225 UBE3CQ15386 1083 aa19.96■□□□□ 0.79
CHMP3-203ENST00000409225 PUS7LQ9H0K6 701 aaKnown RBP19.96■□□□□ 0.79
CHMP3-203ENST00000409225 EPHX3Q9H6B9 360 aa19.96■□□□□ 0.79
CHMP3-203ENST00000409225 CERS4Q9HA82 394 aa19.96■□□□□ 0.79
CHMP3-203ENST00000409225 FEM1BQ9UK73 627 aa19.96■□□□□ 0.79
CHMP3-203ENST00000409225 GNEQ9Y223 722 aaKnown RBP19.96■□□□□ 0.79
CHMP3-203ENST00000409225 DYNC1LI2O43237 492 aaPredicted RBP19.95■□□□□ 0.78
CHMP3-203ENST00000409225 GTPBP6O43824 516 aaPredicted RBP19.95■□□□□ 0.78
CHMP3-203ENST00000409225 ZEB2O60315 1214 aa19.95■□□□□ 0.78
CHMP3-203ENST00000409225 FAM133AQ8N9E0 248 aa19.95■□□□□ 0.78
CHMP3-203ENST00000409225 LRFN3Q9BTN0 628 aa19.95■□□□□ 0.78
CHMP3-203ENST00000409225 HCN4Q9Y3Q4 1203 aa19.95■□□□□ 0.78
CHMP3-203ENST00000409225 MTCH2Q9Y6C9 303 aa19.95■□□□□ 0.78
CHMP3-203ENST00000409225 DDX49Q9Y6V7 483 aaKnown RBP19.95■□□□□ 0.78
CHMP3-203ENST00000409225 SOWAHBA6NEL2 793 aa19.94■□□□□ 0.78
CHMP3-203ENST00000409225 MINDY4BA8MYZ0 360 aa19.94■□□□□ 0.78
CHMP3-203ENST00000409225 CA3P07451 260 aa19.94■□□□□ 0.78
CHMP3-203ENST00000409225 SMPD1P17405 629 aa19.94■□□□□ 0.78
CHMP3-203ENST00000409225 ATP5JP18859 108 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms