RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 BTBD18B2RXH4 712 aa14.2□□□□□ -0.14
HERC3-203ENST00000407637 GHRP10912 638 aa14.2□□□□□ -0.14
HERC3-203ENST00000407637 CYLC1P35663 651 aaPredicted RBP14.2□□□□□ -0.14
HERC3-203ENST00000407637 GUCY2DQ02846 1103 aa14.2□□□□□ -0.14
HERC3-203ENST00000407637 AIMP1Q12904 312 aaKnown RBP14.2□□□□□ -0.14
HERC3-203ENST00000407637 PAK2Q13177 524 aa14.2□□□□□ -0.14
HERC3-203ENST00000407637 RALYLQ86SE5 291 aaKnown RBP14.2□□□□□ -0.14
HERC3-203ENST00000407637 MICU3Q86XE3 530 aa14.2□□□□□ -0.14
HERC3-203ENST00000407637 IFT20Q8IY31 132 aa14.2□□□□□ -0.14
HERC3-203ENST00000407637 NOC3LQ8WTT2 800 aaKnown RBP14.2□□□□□ -0.14
HERC3-203ENST00000407637 NUP133Q8WUM0 1156 aa14.2□□□□□ -0.14
HERC3-203ENST00000407637 RBM33Q96EV2 1170 aaKnown RBP14.2□□□□□ -0.14
HERC3-203ENST00000407637 KDM4CQ9H3R0 1056 aa14.2□□□□□ -0.14
HERC3-203ENST00000407637 MLXIPQ9HAP2 919 aa14.2□□□□□ -0.14
HERC3-203ENST00000407637 TMBIM4Q9HC24 238 aa14.2□□□□□ -0.14
HERC3-203ENST00000407637 EPB41L5Q9HCM4 733 aa14.2□□□□□ -0.14
HERC3-203ENST00000407637 LRWD1Q9UFC0 647 aa14.2□□□□□ -0.14
HERC3-203ENST00000407637 PCDHB6Q9Y5E3 794 aa14.2□□□□□ -0.14
HERC3-203ENST00000407637 PCDHGC5Q9Y5F6 944 aa14.2□□□□□ -0.14
HERC3-203ENST00000407637 SLIT1O75093 1534 aa14.19□□□□□ -0.14
HERC3-203ENST00000407637 GOLGA6L10A6NI86 522 aa14.19□□□□□ -0.14
HERC3-203ENST00000407637 PHF20L1A8MW92 1017 aa14.19□□□□□ -0.14
HERC3-203ENST00000407637 NCK2O43639 380 aa14.19□□□□□ -0.14
HERC3-203ENST00000407637 HEXIM1O94992 359 aaKnown RBP14.19□□□□□ -0.14
HERC3-203ENST00000407637 NEFHP12036 1026 aa14.19□□□□□ -0.14
HERC3-203ENST00000407637 GKAP1Q5VSY0 366 aaPredicted RBP14.19□□□□□ -0.14
HERC3-203ENST00000407637 TAX1BP1Q86VP1 789 aa14.19□□□□□ -0.14
HERC3-203ENST00000407637 STAMQ92783 540 aa14.19□□□□□ -0.14
HERC3-203ENST00000407637 PAGE5Q96GU1 130 aa14.19□□□□□ -0.14
HERC3-203ENST00000407637 LGR6Q9HBX8 967 aa14.19□□□□□ -0.14
HERC3-203ENST00000407637 SLC5A4Q9NY91 659 aa14.19□□□□□ -0.14
HERC3-203ENST00000407637 VPS54Q9P1Q0 977 aa14.19□□□□□ -0.14
HERC3-203ENST00000407637 CPDO75976 1380 aa14.19□□□□□ -0.14
HERC3-203ENST00000407637 UBN2Q6ZU65 1347 aa14.19□□□□□ -0.14
HERC3-203ENST00000407637 USP6P35125 1406 aa14.19□□□□□ -0.14
HERC3-203ENST00000407637 RANBP6O60518 1105 aaKnown RBP14.19□□□□□ -0.14
HERC3-203ENST00000407637 RTN3O95197 1032 aaPredicted RBP14.19□□□□□ -0.14
HERC3-203ENST00000407637 KIF5AQ12840 1032 aa14.19□□□□□ -0.14
HERC3-203ENST00000407637 SF3A3Q12874 501 aaKnown RBP eCLIP14.19□□□□□ -0.14
HERC3-203ENST00000407637 IMMTQ16891 758 aaKnown RBP14.19□□□□□ -0.14
HERC3-203ENST00000407637 TBC1D1Q86TI0 1168 aaPredicted RBP14.19□□□□□ -0.14
HERC3-203ENST00000407637 MREGQ8N565 214 aa14.19□□□□□ -0.14
HERC3-203ENST00000407637 USHBP1Q8N6Y0 703 aa14.19□□□□□ -0.14
HERC3-203ENST00000407637 OR2W6PQ8NHA6 318 aa14.19□□□□□ -0.14
HERC3-203ENST00000407637 RAPGEF5Q92565 580 aa14.19□□□□□ -0.14
HERC3-203ENST00000407637 NDST4Q9H3R1 872 aa14.19□□□□□ -0.14
HERC3-203ENST00000407637 NHEJ1Q9H9Q4 299 aaPredicted RBP14.19□□□□□ -0.14
HERC3-203ENST00000407637 GDF3Q9NR23 364 aa14.19□□□□□ -0.14
HERC3-203ENST00000407637 DENND2AQ9ULE3 1009 aa14.19□□□□□ -0.14
HERC3-203ENST00000407637 FOXP2O15409 715 aa14.18□□□□□ -0.14
HERC3-203ENST00000407637 CDKL5O76039 1030 aa14.18□□□□□ -0.14
HERC3-203ENST00000407637 MOCS3O95396 460 aa14.18□□□□□ -0.14
HERC3-203ENST00000407637 SPAG1Q07617 926 aa14.18□□□□□ -0.14
HERC3-203ENST00000407637 BLMHQ13867 455 aa14.18□□□□□ -0.14
HERC3-203ENST00000407637 CCDC96Q2M329 555 aa14.18□□□□□ -0.14
HERC3-203ENST00000407637 CWF19L1Q69YN2 538 aaKnown RBP14.18□□□□□ -0.14
HERC3-203ENST00000407637 NCOA7Q8NI08 942 aa14.18□□□□□ -0.14
HERC3-203ENST00000407637 P3H4Q92791 437 aa14.18□□□□□ -0.14
HERC3-203ENST00000407637 LTV1Q96GA3 475 aaPredicted RBP14.18□□□□□ -0.14
HERC3-203ENST00000407637 PANK4Q9NVE7 773 aa14.18□□□□□ -0.14
HERC3-203ENST00000407637 HYOU1Q9Y4L1 999 aa14.18□□□□□ -0.14
HERC3-203ENST00000407637 NWD1Q149M9 1564 aa14.18□□□□□ -0.14
HERC3-203ENST00000407637 ABL2P42684 1182 aa14.18□□□□□ -0.14
HERC3-203ENST00000407637 PTPN12Q05209 780 aaKnown RBP14.18□□□□□ -0.14
HERC3-203ENST00000407637 TRADDQ15628 312 aa14.18□□□□□ -0.14
HERC3-203ENST00000407637 GNPTABQ3T906 1256 aa14.18□□□□□ -0.14
HERC3-203ENST00000407637 RRAGBQ5VZM2 374 aa14.18□□□□□ -0.14
HERC3-203ENST00000407637 KRT26Q7Z3Y9 468 aa14.18□□□□□ -0.14
HERC3-203ENST00000407637 CPLX4Q7Z7G2 160 aa14.18□□□□□ -0.14
HERC3-203ENST00000407637 RPUSD2Q8IZ73 545 aaKnown RBP14.18□□□□□ -0.14
HERC3-203ENST00000407637 C1orf131Q8NDD1 294 aaKnown RBP14.18□□□□□ -0.14
HERC3-203ENST00000407637 CCHCR1Q8TD31 782 aa14.18□□□□□ -0.14
HERC3-203ENST00000407637 EPSTI1Q96J88 318 aa14.18□□□□□ -0.14
HERC3-203ENST00000407637 COPRSQ9NQ92 184 aa14.18□□□□□ -0.14
HERC3-203ENST00000407637 CNOT8Q9UFF9 292 aaKnown RBP14.18□□□□□ -0.14
HERC3-203ENST00000407637 PRAMEF22A3QJZ6 481 aa14.17□□□□□ -0.14
HERC3-203ENST00000407637 IGKV5-2P06315 115 aa14.17□□□□□ -0.14
HERC3-203ENST00000407637 GNAT1P11488 350 aa14.17□□□□□ -0.14
HERC3-203ENST00000407637 PAPOLAP51003 745 aaKnown RBP14.17□□□□□ -0.14
HERC3-203ENST00000407637 SLMAPQ14BN4 828 aa14.17□□□□□ -0.14
HERC3-203ENST00000407637 CDC37Q16543 378 aaPredicted RBP14.17□□□□□ -0.14
HERC3-203ENST00000407637 FBXO31Q5XUX0 539 aaPredicted RBP14.17□□□□□ -0.14
HERC3-203ENST00000407637 NKX2-3Q8TAU0 364 aa14.17□□□□□ -0.14
HERC3-203ENST00000407637 CASKIN2Q8WXE0 1202 aa14.17□□□□□ -0.14
HERC3-203ENST00000407637 OSBP2Q969R2 916 aa14.17□□□□□ -0.14
HERC3-203ENST00000407637 MS4A14Q96JA4 679 aa14.17□□□□□ -0.14
HERC3-203ENST00000407637 TAF1DQ9H5J8 278 aaPredicted RBP14.17□□□□□ -0.14
HERC3-203ENST00000407637 SENP2Q9HC62 589 aa14.17□□□□□ -0.14
HERC3-203ENST00000407637 AGPAT5Q9NUQ2 364 aa14.17□□□□□ -0.14
HERC3-203ENST00000407637 CAPN11Q9UMQ6 739 aa14.17□□□□□ -0.14
HERC3-203ENST00000407637 KCNJ14Q9UNX9 436 aa14.17□□□□□ -0.14
HERC3-203ENST00000407637 SRPRBQ9Y5M8 271 aaKnown RBP14.17□□□□□ -0.14
HERC3-203ENST00000407637 GCOM1H8Y6P7 765 aaPredicted RBP14.17□□□□□ -0.14
HERC3-203ENST00000407637 LIN7AO14910 233 aaPredicted RBP14.17□□□□□ -0.14
HERC3-203ENST00000407637 RNF113AO15541 343 aaKnown RBP14.17□□□□□ -0.14
HERC3-203ENST00000407637 TACC1O75410 805 aa14.17□□□□□ -0.14
HERC3-203ENST00000407637 TRIM37O94972 964 aa14.17□□□□□ -0.14
HERC3-203ENST00000407637 MYZAPP0CAP1 466 aa14.17□□□□□ -0.14
HERC3-203ENST00000407637 IARSP41252 1262 aaKnown RBP14.17□□□□□ -0.14
HERC3-203ENST00000407637 RIPK1Q13546 671 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms