RNA–Protein interactions for RNA: ENST00000404548.5

HDAC11-205, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-205ENST00000404548 DCDC2CA8MYV0 355 aa23.06■■□□□ 1.28
HDAC11-205ENST00000404548 RAG1P15918 1043 aa23.06■■□□□ 1.28
HDAC11-205ENST00000404548 STAT2P52630 851 aa23.06■■□□□ 1.28
HDAC11-205ENST00000404548 NKX3-2P78367 333 aa23.06■■□□□ 1.28
HDAC11-205ENST00000404548 PPARAQ07869 468 aa23.06■■□□□ 1.28
HDAC11-205ENST00000404548 FAAP100Q0VG06 881 aa23.06■■□□□ 1.28
HDAC11-205ENST00000404548 FAM160B2Q86V87 743 aa23.06■■□□□ 1.28
HDAC11-205ENST00000404548 PCSK9Q8NBP7 692 aaKnown RBP23.06■■□□□ 1.28
HDAC11-205ENST00000404548 FSD1Q9BTV5 496 aa23.06■■□□□ 1.28
HDAC11-205ENST00000404548 TMEM39AQ9NV64 488 aa23.06■■□□□ 1.28
HDAC11-205ENST00000404548 KCNA10Q16322 511 aa23.05■■□□□ 1.28
HDAC11-205ENST00000404548 CHURC1Q8WUH1 139 aa23.05■■□□□ 1.28
HDAC11-205ENST00000404548 SEC62Q99442 399 aaKnown RBP23.05■■□□□ 1.28
HDAC11-205ENST00000404548 ACAD9Q9H845 621 aa23.05■■□□□ 1.28
HDAC11-205ENST00000404548 SPC25Q9HBM1 224 aa23.05■■□□□ 1.28
HDAC11-205ENST00000404548 MX1P20591 662 aa23.04■■□□□ 1.28
HDAC11-205ENST00000404548 GJA9P57773 515 aa23.04■■□□□ 1.28
HDAC11-205ENST00000404548 TFAP4Q01664 338 aa23.04■■□□□ 1.28
HDAC11-205ENST00000404548 FPGSQ05932 587 aa23.04■■□□□ 1.28
HDAC11-205ENST00000404548 TKFCQ3LXA3 575 aa23.04■■□□□ 1.28
HDAC11-205ENST00000404548 ARMCX2Q7L311 632 aa23.04■■□□□ 1.28
HDAC11-205ENST00000404548 GLT1D1Q96MS3 346 aa23.04■■□□□ 1.28
HDAC11-205ENST00000404548 SEMA6BQ9H3T3 888 aa23.04■■□□□ 1.28
HDAC11-205ENST00000404548 TBX21Q9UL17 535 aa23.04■■□□□ 1.28
HDAC11-205ENST00000404548 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.04■■□□□ 1.28
HDAC11-205ENST00000404548 PCDHB15Q9Y5E8 787 aa23.04■■□□□ 1.28
HDAC11-205ENST00000404548 SALL3Q9BXA9 1300 aa23.04■■□□□ 1.28
HDAC11-205ENST00000404548 TMEM232C9JQI7 657 aa23.03■■□□□ 1.28
HDAC11-205ENST00000404548 CCDC144BQ3MJ40 725 aa23.03■■□□□ 1.28
HDAC11-205ENST00000404548 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.03■■□□□ 1.28
HDAC11-205ENST00000404548 FAM133AQ8N9E0 248 aa23.03■■□□□ 1.28
HDAC11-205ENST00000404548 STAG1Q8WVM7 1258 aa23.03■■□□□ 1.28
HDAC11-205ENST00000404548 RNPC3Q96LT9 517 aaKnown RBP23.03■■□□□ 1.28
HDAC11-205ENST00000404548 FAM161BQ96MY7 647 aa23.03■■□□□ 1.28
HDAC11-205ENST00000404548 CDX2Q99626 313 aaPredicted RBP23.03■■□□□ 1.28
HDAC11-205ENST00000404548 KATNBL1Q9H079 304 aa23.03■■□□□ 1.28
HDAC11-205ENST00000404548 FOXP2O15409 715 aa23.02■■□□□ 1.28
HDAC11-205ENST00000404548 C6orf222P0C671 652 aaPredicted RBP23.02■■□□□ 1.28
HDAC11-205ENST00000404548 SLC1A4P43007 532 aa23.02■■□□□ 1.28
HDAC11-205ENST00000404548 CDK7P50613 346 aa23.02■■□□□ 1.28
HDAC11-205ENST00000404548 EPHB4P54760 987 aa23.02■■□□□ 1.28
HDAC11-205ENST00000404548 TICAM2Q86XR7 235 aa23.02■■□□□ 1.28
HDAC11-205ENST00000404548 CCDC144CPQ8IYA2 1237 aa23.02■■□□□ 1.28
HDAC11-205ENST00000404548 OTUD7AQ8TE49 926 aaPredicted RBP23.02■■□□□ 1.28
HDAC11-205ENST00000404548 ANAPC4Q9UJX5 808 aa23.02■■□□□ 1.28
HDAC11-205ENST00000404548 SPTBN5Q9NRC6 3674 aaKnown RBP23.02■■□□□ 1.28
HDAC11-205ENST00000404548 ZNF536O15090 1300 aa23.02■■□□□ 1.28
HDAC11-205ENST00000404548 MYADML2A6NDP7 307 aa23.01■■□□□ 1.27
HDAC11-205ENST00000404548 ADCY6O43306 1168 aa23.01■■□□□ 1.27
HDAC11-205ENST00000404548 TIMP1P01033 207 aa23.01■■□□□ 1.27
HDAC11-205ENST00000404548 ASGR1P07306 291 aa23.01■■□□□ 1.27
HDAC11-205ENST00000404548 NOVP48745 357 aa23.01■■□□□ 1.27
HDAC11-205ENST00000404548 SLC4A3P48751 1232 aa23.01■■□□□ 1.27
HDAC11-205ENST00000404548 TTYH1Q9H313 450 aaPredicted RBP23.01■■□□□ 1.27
HDAC11-205ENST00000404548 A1CFQ9NQ94 594 aaKnown RBP23.01■■□□□ 1.27
HDAC11-205ENST00000404548 A0A0U1RQG5 324 aaPredicted RBP23■■□□□ 1.27
HDAC11-205ENST00000404548 ASB14A6NK59 587 aa23■■□□□ 1.27
HDAC11-205ENST00000404548 HOMER2Q9NSB8 354 aa23■■□□□ 1.27
HDAC11-205ENST00000404548 RNF146Q9NTX7 359 aa23■■□□□ 1.27
HDAC11-205ENST00000404548 TSPY2A6NKD2 308 aa22.99■■□□□ 1.27
HDAC11-205ENST00000404548 CNTN2Q02246 1040 aa22.99■■□□□ 1.27
HDAC11-205ENST00000404548 RCSD1Q6JBY9 416 aa22.99■■□□□ 1.27
HDAC11-205ENST00000404548 MFSD5Q6N075 450 aa22.99■■□□□ 1.27
HDAC11-205ENST00000404548 STX8Q9UNK0 236 aa22.99■■□□□ 1.27
HDAC11-205ENST00000404548 MCM3APO60318 1980 aa22.98■■□□□ 1.27
HDAC11-205ENST00000404548 ARVCFO00192 962 aa22.98■■□□□ 1.27
HDAC11-205ENST00000404548 CTAGE5O15320 804 aa22.98■■□□□ 1.27
HDAC11-205ENST00000404548 ORC4O43929 436 aa22.98■■□□□ 1.27
HDAC11-205ENST00000404548 FGRP09769 529 aa22.98■■□□□ 1.27
HDAC11-205ENST00000404548 MCCP23508 829 aa22.98■■□□□ 1.27
HDAC11-205ENST00000404548 IKQ13123 557 aaPredicted RBP22.98■■□□□ 1.27
HDAC11-205ENST00000404548 GNASQ5JWF2 1037 aa22.98■■□□□ 1.27
HDAC11-205ENST00000404548 CCDC174Q6PII3 467 aa22.98■■□□□ 1.27
HDAC11-205ENST00000404548 AGBL1Q96MI9 1066 aa22.98■■□□□ 1.27
HDAC11-205ENST00000404548 IL17RBQ9NRM6 502 aa22.98■■□□□ 1.27
HDAC11-205ENST00000404548 CHD9Q3L8U1 2897 aa22.97■■□□□ 1.27
HDAC11-205ENST00000404548 ALX1Q15699 326 aa22.97■■□□□ 1.27
HDAC11-205ENST00000404548 MAFAQ8NHW3 353 aaPredicted RBP22.97■■□□□ 1.27
HDAC11-205ENST00000404548 EVI5LQ96CN4 794 aa22.97■■□□□ 1.27
HDAC11-205ENST00000404548 SEZ6LQ9BYH1 1024 aa22.97■■□□□ 1.27
HDAC11-205ENST00000404548 ISY1Q9ULR0 285 aaKnown RBP22.97■■□□□ 1.27
HDAC11-205ENST00000404548 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.96■■□□□ 1.27
HDAC11-205ENST00000404548 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.96■■□□□ 1.27
HDAC11-205ENST00000404548 SOWAHBA6NEL2 793 aa22.96■■□□□ 1.27
HDAC11-205ENST00000404548 CABYRO75952 493 aa22.96■■□□□ 1.27
HDAC11-205ENST00000404548 TNFAIP2Q03169 654 aa22.96■■□□□ 1.27
HDAC11-205ENST00000404548 PPIGQ13427 754 aaKnown RBP eCLIP22.96■■□□□ 1.272e-6■■■■■ 30.1
HDAC11-205ENST00000404548 CCDC129Q6ZRS4 1044 aa22.96■■□□□ 1.27
HDAC11-205ENST00000404548 FAM126BQ8IXS8 530 aa22.96■■□□□ 1.27
HDAC11-205ENST00000404548 TRERF1Q96PN7 1200 aa22.96■■□□□ 1.27
HDAC11-205ENST00000404548 HELLSQ9NRZ9 838 aa22.96■■□□□ 1.27
HDAC11-205ENST00000404548 PRR12Q9ULL5 1215 aa22.96■■□□□ 1.27
HDAC11-205ENST00000404548 GNEQ9Y223 722 aaKnown RBP22.96■■□□□ 1.27
HDAC11-205ENST00000404548 LRRC37A2A6NM11 1700 aa22.95■■□□□ 1.26
HDAC11-205ENST00000404548 TLR3O15455 904 aaKnown RBP22.95■■□□□ 1.26
HDAC11-205ENST00000404548 ZMYM6O95789 1325 aa22.95■■□□□ 1.26
HDAC11-205ENST00000404548 IRX5P78411 483 aaPredicted RBP22.95■■□□□ 1.26
HDAC11-205ENST00000404548 KCTD1Q719H9 257 aa22.95■■□□□ 1.26
HDAC11-205ENST00000404548 SLC43A3Q8NBI5 491 aa22.95■■□□□ 1.26
HDAC11-205ENST00000404548 DCAF4Q8WV16 495 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms