RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 KPNB1Q14974 876 aaKnown RBP10.95□□□□□ -0.66
PTPRM-203ENST00000400060 C10orf76Q5T2E6 689 aa10.95□□□□□ -0.66
PTPRM-203ENST00000400060 MAP7D3Q8IWC1 876 aa10.95□□□□□ -0.66
PTPRM-203ENST00000400060 EPC1Q9H2F5 836 aa10.95□□□□□ -0.66
PTPRM-203ENST00000400060 TUBA8Q9NY65 449 aaPredicted RBP10.95□□□□□ -0.66
PTPRM-203ENST00000400060 ADCY9O60503 1353 aa10.95□□□□□ -0.66
PTPRM-203ENST00000400060 TNRQ92752 1358 aa10.95□□□□□ -0.66
PTPRM-203ENST00000400060 MAGEA13PA6NCF6 341 aa10.95□□□□□ -0.66
PTPRM-203ENST00000400060 CALM1P0DP23 149 aa10.95□□□□□ -0.66
PTPRM-203ENST00000400060 CALM2P0DP24 149 aa10.95□□□□□ -0.66
PTPRM-203ENST00000400060 CALM3P0DP25 149 aa10.95□□□□□ -0.66
PTPRM-203ENST00000400060 SLC44A4Q53GD3 710 aa10.95□□□□□ -0.66
PTPRM-203ENST00000400060 CNNM4Q6P4Q7 775 aa10.95□□□□□ -0.66
PTPRM-203ENST00000400060 CATIPQ7Z7H3 387 aa10.95□□□□□ -0.66
PTPRM-203ENST00000400060 ANKRD2Q9GZV1 360 aa10.95□□□□□ -0.66
PTPRM-203ENST00000400060 CHL1O00533 1208 aa10.95□□□□□ -0.66
PTPRM-203ENST00000400060 RNF113AO15541 343 aaKnown RBP10.95□□□□□ -0.66
PTPRM-203ENST00000400060 GCLCP48506 637 aaPredicted RBP10.95□□□□□ -0.66
PTPRM-203ENST00000400060 ASIC2Q16515 512 aa10.95□□□□□ -0.66
PTPRM-203ENST00000400060 OPTNQ96CV9 577 aa10.95□□□□□ -0.66
PTPRM-203ENST00000400060 IWS1Q96ST2 819 aa10.95□□□□□ -0.66
PTPRM-203ENST00000400060 HSPA6P17066 643 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 TMEM154Q6P9G4 183 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 TOM1L2Q6ZVM7 507 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 ACRBPQ8NEB7 543 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 PPP1R14BQ96C90 147 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 FAM167BQ9BTA0 163 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 NOVA2Q9UNW9 492 aaKnown RBP10.94□□□□□ -0.66
PTPRM-203ENST00000400060 NPATQ14207 1427 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 ATP7AQ04656 1500 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 MMEP08473 750 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 FKBP4Q02790 459 aaKnown RBP eCLIP10.94□□□□□ -0.66
PTPRM-203ENST00000400060 CETN1Q12798 172 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 LRRC2Q9BYS8 371 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 TYW1Q9NV66 732 aaKnown RBP10.94□□□□□ -0.66
PTPRM-203ENST00000400060 DIS3Q9Y2L1 958 aaKnown RBP10.94□□□□□ -0.66
PTPRM-203ENST00000400060 SCINQ9Y6U3 715 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 N4BP1O75113 896 aaKnown RBP10.94□□□□□ -0.66
PTPRM-203ENST00000400060 DEXIO95424 95 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 ANP32DO95626 131 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 SCTRP47872 440 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 RAD23BP54727 409 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 PDCD7Q8N8D1 485 aaKnown RBP10.94□□□□□ -0.66
PTPRM-203ENST00000400060 CSRNP2Q9H175 543 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 TMEM60Q9H2L4 133 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 MAN1B1Q9UKM7 699 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 ERVK-7P63135 1459 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 CALML3P27482 149 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 RPS6KA3P51812 740 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 NUGGCQ68CJ6 796 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 TRIM42Q8IWZ5 723 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 TRMT44Q8IYL2 757 aaKnown RBP10.94□□□□□ -0.66
PTPRM-203ENST00000400060 NSUN7Q8NE18 718 aaKnown RBP10.94□□□□□ -0.66
PTPRM-203ENST00000400060 MYCBPAPQ8TBZ2 947 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 NAPBQ9H115 298 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 AATFQ9NY61 560 aaKnown RBP eCLIP10.94□□□□□ -0.66
PTPRM-203ENST00000400060 SERTAD1Q9UHV2 236 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 RWDD2AQ9UIY3 292 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 CARMIL3Q8ND23 1372 aa10.94□□□□□ -0.66
PTPRM-203ENST00000400060 CFAP65Q6ZU64 1925 aaKnown RBP10.94□□□□□ -0.66
PTPRM-203ENST00000400060 HOXB7P09629 217 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 LONRF3Q496Y0 759 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 SFMBT2Q5VUG0 894 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 BBOF1Q8ND07 529 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 ANKZF1Q9H8Y5 726 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 ABHD10Q9NUJ1 306 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 ABCC1P33527 1531 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 AP5Z1O43299 807 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 GTPBP6O43824 516 aaPredicted RBP10.93□□□□□ -0.66
PTPRM-203ENST00000400060 FBLN1P23142 703 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 ZBED6P86452 979 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 EIF4A2Q14240 407 aaKnown RBP10.93□□□□□ -0.66
PTPRM-203ENST00000400060 ZC3H18Q86VM9 953 aaKnown RBP10.93□□□□□ -0.66
PTPRM-203ENST00000400060 MICU3Q86XE3 530 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 CSGALNACT2Q8N6G5 542 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 NEK9Q8TD19 979 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 DNAJC9Q8WXX5 260 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 MAGEF1Q9HAY2 307 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 PCDHA5Q9Y5H7 936 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.93□□□□□ -0.66
PTPRM-203ENST00000400060 RFX7Q2KHR2 1363 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 AP1G2O75843 785 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 PTH1RQ03431 593 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 ANKRD20A8PQ5CZ79 823 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 DAB2IPQ5VWQ8 1189 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 SPATA21Q7Z572 469 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 KRT12Q99456 494 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 PRDM11Q9NQV5 511 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 HOMER2Q9NSB8 354 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 YTHDC2Q9H6S0 1430 aaKnown RBP10.93□□□□□ -0.66
PTPRM-203ENST00000400060 KRIT1O00522 736 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 MYL1P05976 194 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 BICDL1Q6ZP65 573 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 CTNNAL1Q9UBT7 734 aa10.93□□□□□ -0.66
PTPRM-203ENST00000400060 BEND3Q5T5X7 828 aa10.92□□□□□ -0.66
PTPRM-203ENST00000400060 CWF19L1Q69YN2 538 aaKnown RBP10.92□□□□□ -0.66
PTPRM-203ENST00000400060 KRT40Q6A162 431 aa10.92□□□□□ -0.66
PTPRM-203ENST00000400060 ARMCX6Q7L4S7 300 aa10.92□□□□□ -0.66
PTPRM-203ENST00000400060 ENC1O14682 589 aa10.92□□□□□ -0.66
PTPRM-203ENST00000400060 LMNB1P20700 586 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms