RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 HNRNPH2P55795 449 aaKnown RBP5.51□□□□□ -1.53
SMAD4-202ENST00000398417 TCP11X2Q5H9J9 407 aa5.51□□□□□ -1.53
SMAD4-202ENST00000398417 TXLNBQ8N3L3 684 aa5.51□□□□□ -1.53
SMAD4-202ENST00000398417 ZNF579Q8NAF0 562 aaKnown RBP5.51□□□□□ -1.53
SMAD4-202ENST00000398417 NSUN4Q96CB9 384 aaKnown RBP5.51□□□□□ -1.53
SMAD4-202ENST00000398417 TMEM47Q9BQJ4 181 aa5.51□□□□□ -1.53
SMAD4-202ENST00000398417 PDE11AQ9HCR9 933 aa5.51□□□□□ -1.53
SMAD4-202ENST00000398417 ADAMTS3O15072 1205 aa5.51□□□□□ -1.53
SMAD4-202ENST00000398417 MOCS3O95396 460 aa5.51□□□□□ -1.53
SMAD4-202ENST00000398417 OR52Z1P0C646 297 aa5.51□□□□□ -1.53
SMAD4-202ENST00000398417 VEGFAP15692 232 aaPredicted RBP5.51□□□□□ -1.53
SMAD4-202ENST00000398417 BMP6P22004 513 aa5.51□□□□□ -1.53
SMAD4-202ENST00000398417 GSPT2Q8IYD1 628 aaKnown RBP5.51□□□□□ -1.53
SMAD4-202ENST00000398417 RBM17Q96I25 401 aaKnown RBP5.51□□□□□ -1.53
SMAD4-202ENST00000398417 EYA3Q99504 573 aa5.51□□□□□ -1.53
SMAD4-202ENST00000398417 NAA15Q9BXJ9 866 aaKnown RBP5.51□□□□□ -1.53
SMAD4-202ENST00000398417 ERVK-24P63145 666 aa5.51□□□□□ -1.53
SMAD4-202ENST00000398417 TRIM14Q14142 442 aa5.51□□□□□ -1.53
SMAD4-202ENST00000398417 PTPROQ16827 1216 aa5.51□□□□□ -1.53
SMAD4-202ENST00000398417 POLD4Q9HCU8 107 aa5.51□□□□□ -1.53
SMAD4-202ENST00000398417 RWDD2AQ9UIY3 292 aa5.51□□□□□ -1.53
SMAD4-202ENST00000398417 FAM205AQ6ZU69 1335 aa5.51□□□□□ -1.53
SMAD4-202ENST00000398417 A0A1B0GTH6 734 aa5.51□□□□□ -1.53
SMAD4-202ENST00000398417 SCNN1DP51172 638 aa5.51□□□□□ -1.53
SMAD4-202ENST00000398417 OR8K1Q8NGG5 319 aa5.51□□□□□ -1.53
SMAD4-202ENST00000398417 P2RX5Q93086 422 aa5.51□□□□□ -1.53
SMAD4-202ENST00000398417 MMS19Q96T76 1030 aa5.51□□□□□ -1.53
SMAD4-202ENST00000398417 GGA1Q9UJY5 639 aa5.51□□□□□ -1.53
SMAD4-202ENST00000398417 MRFAP1Q9Y605 127 aa5.51□□□□□ -1.53
SMAD4-202ENST00000398417 TFRCP02786 760 aaKnown RBP5.5□□□□□ -1.53
SMAD4-202ENST00000398417 C2orf54Q08AI8 447 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 SLC51AQ86UW1 340 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 TBCKQ8TEA7 893 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 USP40Q9NVE5 1235 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 EPN1Q9Y6I3 576 aaPredicted RBP5.5□□□□□ -1.53
SMAD4-202ENST00000398417 PPLO60437 1756 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 RPS6KA4O75676 772 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 CCNE1P24864 410 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 GPSM2P81274 684 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 TBX2Q13207 712 aaPredicted RBP5.5□□□□□ -1.53
SMAD4-202ENST00000398417 NR1I3Q14994 352 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 TMCO4Q5TGY1 634 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 TCERG1LQ5VWI1 586 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 TRIM65Q6PJ69 517 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 HDXQ7Z353 690 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 CNOT6LQ96LI5 555 aaKnown RBP5.5□□□□□ -1.53
SMAD4-202ENST00000398417 PANX2Q96RD6 677 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 CRACR2AQ9BSW2 395 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 MLXIPQ9HAP2 919 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 CWC15Q9P013 229 aaKnown RBP5.5□□□□□ -1.53
SMAD4-202ENST00000398417 XDHP47989 1333 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 NCK2O43639 380 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 FCER1AP12319 257 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 RRAGAQ7L523 313 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 L2HGDHQ9H9P8 463 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 FAN1Q9Y2M0 1017 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 CNTNAP5Q8WYK1 1306 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 H7C1D1 291 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 TRAF5O00463 557 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 CAPN2P17655 700 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 NF2P35240 595 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 SARSP49591 514 aaKnown RBP5.5□□□□□ -1.53
SMAD4-202ENST00000398417 GRM4Q14833 912 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 DNAJC21Q5F1R6 531 aaKnown RBP5.5□□□□□ -1.53
SMAD4-202ENST00000398417 CNBD1Q8NA66 436 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 ZNF287Q9HBT7 754 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 ZNF446Q9NWS9 450 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 HDAC6Q9UBN7 1215 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 MKL2Q9ULH7 1088 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 BICDL2A1A5D9 508 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 USP17L5A8MUK1 530 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 LMNB1P20700 586 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 PAFAH1B1P43034 410 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 KLK7P49862 253 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 CTDP1Q9Y5B0 961 aaPredicted RBP5.5□□□□□ -1.53
SMAD4-202ENST00000398417 FHOD1Q9Y613 1164 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 TMCO5BA8MYB1 307 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 E9PMD0 336 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 CKAP4Q07065 602 aaKnown RBP5.5□□□□□ -1.53
SMAD4-202ENST00000398417 NEK8Q86SG6 692 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 FBXL16Q8N461 479 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 ADD3Q9UEY8 706 aaKnown RBP5.5□□□□□ -1.53
SMAD4-202ENST00000398417 PEAK1Q9H792 1746 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 SEMA3EO15041 775 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 KRT86O43790 486 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 SF3B3Q15393 1217 aaKnown RBP5.5□□□□□ -1.53
SMAD4-202ENST00000398417 KLHL7Q8IXQ5 586 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 ADSSL1Q8N142 457 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 MED15Q96RN5 788 aa5.5□□□□□ -1.53
SMAD4-202ENST00000398417 BRD3Q15059 726 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 CHP1Q99653 195 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 LSM14BQ9BX40 385 aaKnown RBP5.49□□□□□ -1.53
SMAD4-202ENST00000398417 THAP9Q9H5L6 903 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 KIF1BO60333 1816 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 TTC26A0AVF1 554 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 TADA3O75528 432 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 ABL1P00519 1130 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 ATP1A1P05023 1023 aaKnown RBP5.49□□□□□ -1.53
SMAD4-202ENST00000398417 CDK8P49336 464 aa5.49□□□□□ -1.53
SMAD4-202ENST00000398417 ST5P78524 1137 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms