RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 P2RX5Q93086 422 aa12.2□□□□□ -0.46
HPS4-202ENST00000398145 FUCA2Q9BTY2 467 aa12.2□□□□□ -0.46
HPS4-202ENST00000398145 NT5C3AQ9H0P0 336 aa12.2□□□□□ -0.46
HPS4-202ENST00000398145 VEZTQ9HBM0 779 aa12.2□□□□□ -0.46
HPS4-202ENST00000398145 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.2□□□□□ -0.462e-7■□□□□ 11.1
HPS4-202ENST00000398145 PARP2Q9UGN5 583 aa12.2□□□□□ -0.46
HPS4-202ENST00000398145 SAP30BPQ9UHR5 308 aaKnown RBP12.2□□□□□ -0.46
HPS4-202ENST00000398145 ABCA6Q8N139 1617 aa12.2□□□□□ -0.46
HPS4-202ENST00000398145 GLI2P10070 1586 aa12.2□□□□□ -0.46
HPS4-202ENST00000398145 RFX7Q2KHR2 1363 aa12.2□□□□□ -0.46
HPS4-202ENST00000398145 H2AFZP0C0S5 128 aa12.2□□□□□ -0.46
HPS4-202ENST00000398145 CXCR5P32302 372 aa12.2□□□□□ -0.46
HPS4-202ENST00000398145 SARNPP82979 210 aaKnown RBP12.2□□□□□ -0.46
HPS4-202ENST00000398145 TSNAXIP1Q2TAA8 658 aa12.2□□□□□ -0.46
HPS4-202ENST00000398145 H2AFVQ71UI9 128 aa12.2□□□□□ -0.46
HPS4-202ENST00000398145 F8W031 263 aaPredicted RBP12.19□□□□□ -0.46
HPS4-202ENST00000398145 CLTAP09496 248 aa12.19□□□□□ -0.46
HPS4-202ENST00000398145 PCP11498 1178 aaKnown RBP12.19□□□□□ -0.46
HPS4-202ENST00000398145 TCP11X2Q5H9J9 407 aa12.19□□□□□ -0.46
HPS4-202ENST00000398145 MCTP2Q6DN12 878 aa12.19□□□□□ -0.46
HPS4-202ENST00000398145 ZNF579Q8NAF0 562 aaKnown RBP12.19□□□□□ -0.46
HPS4-202ENST00000398145 GLT8D2Q9H1C3 349 aa12.19□□□□□ -0.46
HPS4-202ENST00000398145 DPH5Q9H2P9 285 aa12.19□□□□□ -0.46
HPS4-202ENST00000398145 NHEJ1Q9H9Q4 299 aaPredicted RBP12.19□□□□□ -0.46
HPS4-202ENST00000398145 ARPP21Q9UBL0 812 aaPredicted RBP12.19□□□□□ -0.46
HPS4-202ENST00000398145 CCDC169A6NNP5 214 aa12.19□□□□□ -0.46
HPS4-202ENST00000398145 ZBTB22O15209 634 aa12.19□□□□□ -0.46
HPS4-202ENST00000398145 MYL1P05976 194 aa12.19□□□□□ -0.46
HPS4-202ENST00000398145 XRCC5P13010 732 aaKnown RBP12.19□□□□□ -0.46
HPS4-202ENST00000398145 CEP128Q6ZU80 1094 aa12.19□□□□□ -0.46
HPS4-202ENST00000398145 ACSBG1Q96GR2 724 aa12.19□□□□□ -0.46
HPS4-202ENST00000398145 ABHD10Q9NUJ1 306 aa12.19□□□□□ -0.46
HPS4-202ENST00000398145 ARMCX3Q9UH62 379 aaPredicted RBP12.19□□□□□ -0.46
HPS4-202ENST00000398145 DNM3Q9UQ16 869 aa12.19□□□□□ -0.46
HPS4-202ENST00000398145 DPF2Q92785 391 aa12.19□□□□□ -0.46
HPS4-202ENST00000398145 PPP1R12CQ9BZL4 782 aa12.19□□□□□ -0.46
HPS4-202ENST00000398145 GREM2Q9H772 168 aa12.19□□□□□ -0.46
HPS4-202ENST00000398145 RNF17Q9BXT8 1623 aaKnown RBP12.19□□□□□ -0.46
HPS4-202ENST00000398145 SETBP1Q9Y6X0 1596 aa12.19□□□□□ -0.46
HPS4-202ENST00000398145 NEBLO76041 1014 aa12.19□□□□□ -0.46
HPS4-202ENST00000398145 BCAMP50895 628 aa12.19□□□□□ -0.46
HPS4-202ENST00000398145 PLS1Q14651 629 aa12.19□□□□□ -0.46
HPS4-202ENST00000398145 NEK8Q86SG6 692 aa12.19□□□□□ -0.46
HPS4-202ENST00000398145 U2AF1L4Q8WU68 220 aaKnown RBP12.19□□□□□ -0.46
HPS4-202ENST00000398145 GPKOWQ92917 476 aaPredicted RBP eCLIP12.19□□□□□ -0.46
HPS4-202ENST00000398145 FAM169AQ9Y6X4 670 aa12.19□□□□□ -0.46
HPS4-202ENST00000398145 LRRIQ1Q96JM4 1722 aa12.18□□□□□ -0.46
HPS4-202ENST00000398145 CDC25AP30304 524 aa12.18□□□□□ -0.46
HPS4-202ENST00000398145 RFC4P35249 363 aa12.18□□□□□ -0.46
HPS4-202ENST00000398145 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.18□□□□□ -0.46
HPS4-202ENST00000398145 JPH2Q9BR39 696 aaPredicted RBP12.18□□□□□ -0.46
HPS4-202ENST00000398145 TACO1Q9BSH4 297 aaKnown RBP12.18□□□□□ -0.46
HPS4-202ENST00000398145 PLEKHG1Q9ULL1 1385 aa12.18□□□□□ -0.46
HPS4-202ENST00000398145 NR1D1P20393 614 aa12.18□□□□□ -0.46
HPS4-202ENST00000398145 NEDD9Q14511 834 aa12.18□□□□□ -0.46
HPS4-202ENST00000398145 PTPROQ16827 1216 aa12.18□□□□□ -0.46
HPS4-202ENST00000398145 FYB2Q5VWT5 728 aa12.18□□□□□ -0.46
HPS4-202ENST00000398145 SHC4Q6S5L8 630 aa12.18□□□□□ -0.46
HPS4-202ENST00000398145 BANK1Q8NDB2 785 aa12.18□□□□□ -0.46
HPS4-202ENST00000398145 L2HGDHQ9H9P8 463 aa12.18□□□□□ -0.46
HPS4-202ENST00000398145 ATP2A2P16615 1042 aaKnown RBP12.18□□□□□ -0.46
HPS4-202ENST00000398145 FAM26FQ5R3K3 315 aa12.18□□□□□ -0.46
HPS4-202ENST00000398145 SRLQ86TD4 932 aa12.18□□□□□ -0.46
HPS4-202ENST00000398145 CEP63Q96MT8 703 aa12.18□□□□□ -0.46
HPS4-202ENST00000398145 THAP9Q9H5L6 903 aa12.18□□□□□ -0.46
HPS4-202ENST00000398145 ODF2LQ9ULJ1 636 aa12.18□□□□□ -0.46
HPS4-202ENST00000398145 STK38LQ9Y2H1 464 aa12.18□□□□□ -0.46
HPS4-202ENST00000398145 TEX33O43247 280 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 HIP1RO75146 1068 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 CCNE1P24864 410 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 GCKP35557 465 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 MAN2A1Q16706 1144 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 USPL1Q5W0Q7 1092 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 MB21D1Q8N884 522 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 MGARPQ8TDB4 240 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 IRX2Q9BZI1 471 aaPredicted RBP12.17□□□□□ -0.46
HPS4-202ENST00000398145 QRICH2Q9H0J4 1663 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 ANO9A1A5B4 782 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 LAD1O00515 517 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 ABCB4P21439 1286 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 STX2P32856 288 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 ST5P78524 1137 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 CCDC38Q502W7 563 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 STOX1Q6ZVD7 989 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 ARMC9Q7Z3E5 817 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 CCDC63Q8NA47 563 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 WDR66Q8TBY9 1149 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 IMPG2Q9BZV3 1241 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 KLHL14Q9P2G3 628 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 FEZ2Q9UHY8 353 aaPredicted RBP12.17□□□□□ -0.46
HPS4-202ENST00000398145 SLC7A5Q01650 507 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 CCDC197Q8NCU1 140 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 KIFAP3Q92845 792 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 AK8Q96MA6 479 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 SYNCQ9H7C4 482 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 BIN2Q9UBW5 565 aaPredicted RBP12.17□□□□□ -0.46
HPS4-202ENST00000398145 PCDHB13Q9Y5F0 798 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 WDR19Q8NEZ3 1342 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 ABCC12Q96J65 1359 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 CCDC160A6NGH7 325 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms