RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 PALM3A6NDB9 673 aaPredicted RBP34.22■■■■□ 3.07
CHCHD4-202ENST00000396914 ATP2A1O14983 1001 aa34.22■■■■□ 3.07
CHCHD4-202ENST00000396914 MICU3Q86XE3 530 aa34.22■■■■□ 3.07
CHCHD4-202ENST00000396914 ADGRF4Q8IZF3 695 aa34.22■■■■□ 3.07
CHCHD4-202ENST00000396914 BRF1Q92994 677 aa34.22■■■■□ 3.07
CHCHD4-202ENST00000396914 AGBL1Q96MI9 1066 aa34.22■■■■□ 3.07
CHCHD4-202ENST00000396914 KLF18A0A0U1RQI7 1052 aa34.21■■■■□ 3.07
CHCHD4-202ENST00000396914 SOCS4Q8WXH5 440 aa34.21■■■■□ 3.07
CHCHD4-202ENST00000396914 UPF2Q9HAU5 1272 aaKnown RBP34.21■■■■□ 3.07
CHCHD4-202ENST00000396914 CCPG1Q9ULG6 757 aa34.21■■■■□ 3.07
CHCHD4-202ENST00000396914 RIPK3Q9Y572 518 aa34.21■■■■□ 3.07
CHCHD4-202ENST00000396914 ALAS1P13196 640 aa34.21■■■■□ 3.07
CHCHD4-202ENST00000396914 PTPREP23469 700 aa34.21■■■■□ 3.07
CHCHD4-202ENST00000396914 APOBRQ0VD83 1088 aa34.2■■■■□ 3.06
CHCHD4-202ENST00000396914 APOA5Q6Q788 366 aa34.2■■■■□ 3.06
CHCHD4-202ENST00000396914 MAP3K14Q99558 947 aa34.2■■■■□ 3.06
CHCHD4-202ENST00000396914 PDRG1Q9NUG6 133 aa34.2■■■■□ 3.06
CHCHD4-202ENST00000396914 BRPF3Q9ULD4 1205 aa34.2■■■■□ 3.06
CHCHD4-202ENST00000396914 ZNF536O15090 1300 aa34.19■■■■□ 3.06
CHCHD4-202ENST00000396914 SLC15A5A6NIM6 579 aa34.19■■■■□ 3.06
CHCHD4-202ENST00000396914 ZBTB43O43298 467 aa34.19■■■■□ 3.06
CHCHD4-202ENST00000396914 STRNO43815 780 aa34.19■■■■□ 3.06
CHCHD4-202ENST00000396914 FCER1AP12319 257 aa34.19■■■■□ 3.06
CHCHD4-202ENST00000396914 CYP2B6P20813 491 aa34.19■■■■□ 3.06
CHCHD4-202ENST00000396914 CDC37Q16543 378 aaPredicted RBP34.19■■■■□ 3.06
CHCHD4-202ENST00000396914 MMP19Q99542 508 aa34.19■■■■□ 3.06
CHCHD4-202ENST00000396914 ICAM1P05362 532 aa34.18■■■■□ 3.06
CHCHD4-202ENST00000396914 GJD2Q9UKL4 321 aa34.18■■■■□ 3.06
CHCHD4-202ENST00000396914 KCTD2Q14681 263 aa34.17■■■■□ 3.06
CHCHD4-202ENST00000396914 SLC9C1Q4G0N8 1177 aa34.17■■■■□ 3.06
CHCHD4-202ENST00000396914 MORN1Q5T089 497 aa34.17■■■■□ 3.06
CHCHD4-202ENST00000396914 FANCBQ8NB91 859 aa34.17■■■■□ 3.06
CHCHD4-202ENST00000396914 JMJD4Q9H9V9 463 aa34.17■■■■□ 3.06
CHCHD4-202ENST00000396914 PLXNB2O15031 1838 aa34.17■■■■□ 3.06
CHCHD4-202ENST00000396914 DOCK3Q8IZD9 2030 aa34.17■■■■□ 3.06
CHCHD4-202ENST00000396914 RGS2P41220 211 aa34.16■■■■□ 3.06
CHCHD4-202ENST00000396914 GNAQP50148 359 aa34.16■■■■□ 3.06
CHCHD4-202ENST00000396914 DPP9Q86TI2 863 aa34.16■■■■□ 3.06
CHCHD4-202ENST00000396914 HOMER1Q86YM7 354 aa34.16■■■■□ 3.06
CHCHD4-202ENST00000396914 TRERF1Q96PN7 1200 aa34.16■■■■□ 3.06
CHCHD4-202ENST00000396914 C22orf23Q9BZE7 217 aa34.16■■■■□ 3.06
CHCHD4-202ENST00000396914 RNF146Q9NTX7 359 aa34.16■■■■□ 3.06
CHCHD4-202ENST00000396914 BIN2Q9UBW5 565 aaPredicted RBP34.16■■■■□ 3.06
CHCHD4-202ENST00000396914 FBXO40Q9UH90 709 aa34.16■■■■□ 3.06
CHCHD4-202ENST00000396914 HPS5Q9UPZ3 1129 aa34.16■■■■□ 3.06
CHCHD4-202ENST00000396914 GOLGA8AA7E2F4 631 aa34.15■■■■□ 3.06
CHCHD4-202ENST00000396914 GOLGA8BA8MQT2 603 aa34.15■■■■□ 3.06
CHCHD4-202ENST00000396914 ADCY3O60266 1144 aa34.15■■■■□ 3.06
CHCHD4-202ENST00000396914 TAL1P17542 331 aaPredicted RBP34.15■■■■□ 3.06
CHCHD4-202ENST00000396914 ADORA2AP29274 412 aa34.15■■■■□ 3.06
CHCHD4-202ENST00000396914 MAP2K5Q13163 448 aa34.15■■■■□ 3.06
CHCHD4-202ENST00000396914 GRB14Q14449 540 aa34.15■■■■□ 3.06
CHCHD4-202ENST00000396914 USH1GQ495M9 461 aa34.15■■■■□ 3.06
CHCHD4-202ENST00000396914 CHST13Q8NET6 341 aa34.15■■■■□ 3.06
CHCHD4-202ENST00000396914 PIBF1Q8WXW3 757 aa34.15■■■■□ 3.06
CHCHD4-202ENST00000396914 TKFCQ3LXA3 575 aa34.14■■■■□ 3.06
CHCHD4-202ENST00000396914 ACAD9Q9H845 621 aa34.14■■■■□ 3.06
CHCHD4-202ENST00000396914 PNMA2Q9UL42 364 aa34.14■■■■□ 3.06
CHCHD4-202ENST00000396914 IRF5Q13568 498 aa34.13■■■■□ 3.05
CHCHD4-202ENST00000396914 RTN1Q16799 776 aa34.13■■■■□ 3.05
CHCHD4-202ENST00000396914 NBPF11Q86T75 865 aa34.13■■■■□ 3.05
CHCHD4-202ENST00000396914 CMTR1Q8N1G2 835 aaKnown RBP34.13■■■■□ 3.05
CHCHD4-202ENST00000396914 ANKRD35Q8N283 1001 aa34.13■■■■□ 3.05
CHCHD4-202ENST00000396914 SH3TC2Q8TF17 1288 aa34.13■■■■□ 3.05
CHCHD4-202ENST00000396914 DDX11Q96FC9 970 aa34.13■■■■□ 3.05
CHCHD4-202ENST00000396914 LZTS2Q9BRK4 669 aa34.13■■■■□ 3.05
CHCHD4-202ENST00000396914 PLEKHA8P1O95397 391 aa34.13■■■■□ 3.05
CHCHD4-202ENST00000396914 ELNP15502 786 aa34.13■■■■□ 3.05
CHCHD4-202ENST00000396914 GRK4P32298 578 aa34.13■■■■□ 3.05
CHCHD4-202ENST00000396914 QRICH1Q2TAL8 776 aa34.13■■■■□ 3.05
CHCHD4-202ENST00000396914 ABRAQ8N0Z2 381 aa34.13■■■■□ 3.05
CHCHD4-202ENST00000396914 CCDC82Q8N4S0 544 aa34.13■■■■□ 3.05
CHCHD4-202ENST00000396914 METAP2P50579 478 aaKnown RBP eCLIP34.12■■■■□ 3.05
CHCHD4-202ENST00000396914 FBXO11Q86XK2 927 aa34.12■■■■□ 3.05
CHCHD4-202ENST00000396914 FBXL16Q8N461 479 aa34.12■■■■□ 3.05
CHCHD4-202ENST00000396914 SLAIN1Q8ND83 568 aa34.12■■■■□ 3.05
CHCHD4-202ENST00000396914 APBA2Q99767 749 aa34.12■■■■□ 3.05
CHCHD4-202ENST00000396914 LARP6Q9BRS8 491 aaKnown RBP34.12■■■■□ 3.05
CHCHD4-202ENST00000396914 RBM28Q9NW13 759 aaKnown RBP34.12■■■■□ 3.05
CHCHD4-202ENST00000396914 SLC5A4Q9NY91 659 aa34.12■■■■□ 3.05
CHCHD4-202ENST00000396914 TOB2Q14106 344 aaPredicted RBP34.11■■■■□ 3.05
CHCHD4-202ENST00000396914 USP6NLQ92738 828 aa34.11■■■■□ 3.05
CHCHD4-202ENST00000396914 PIGSQ96S52 555 aa34.11■■■■□ 3.05
CHCHD4-202ENST00000396914 AGXT2Q9BYV1 514 aa34.11■■■■□ 3.05
CHCHD4-202ENST00000396914 RIOX1Q9H6W3 641 aa34.11■■■■□ 3.05
CHCHD4-202ENST00000396914 PGK2P07205 417 aa34.1■■■■□ 3.05
CHCHD4-202ENST00000396914 MUM1L1Q5H9M0 696 aa34.1■■■■□ 3.05
CHCHD4-202ENST00000396914 ABHD8Q96I13 439 aa34.1■■■■□ 3.05
CHCHD4-202ENST00000396914 ZBTB5O15062 677 aa34.09■■■■□ 3.05
CHCHD4-202ENST00000396914 CYTH3O43739 400 aa34.09■■■■□ 3.05
CHCHD4-202ENST00000396914 MYCP01106 439 aaPredicted RBP34.09■■■■□ 3.05
CHCHD4-202ENST00000396914 NEK4P51957 841 aa34.09■■■■□ 3.05
CHCHD4-202ENST00000396914 SRBD1Q8N5C6 995 aaKnown RBP34.09■■■■□ 3.05
CHCHD4-202ENST00000396914 RRP36Q96EU6 259 aaKnown RBP34.09■■■■□ 3.05
CHCHD4-202ENST00000396914 XRCC5P13010 732 aaKnown RBP34.08■■■■□ 3.05
CHCHD4-202ENST00000396914 SLC35G1Q2M3R5 365 aa34.08■■■■□ 3.05
CHCHD4-202ENST00000396914 NSMFQ6X4W1 530 aa34.08■■■■□ 3.05
CHCHD4-202ENST00000396914 TMTC3Q6ZXV5 915 aa34.08■■■■□ 3.05
CHCHD4-202ENST00000396914 PXYLP1Q8TE99 480 aa34.08■■■■□ 3.05
CHCHD4-202ENST00000396914 SPZ1Q9BXG8 430 aa34.08■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms