RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 ACAD9Q9H845 621 aa16.18■□□□□ 0.18
CXCL12-205ENST00000395794 PRR12Q9ULL5 1215 aa16.18■□□□□ 0.18
CXCL12-205ENST00000395794 PFASO15067 1338 aa16.18■□□□□ 0.18
CXCL12-205ENST00000395794 GJC2Q5T442 439 aaPredicted RBP16.17■□□□□ 0.18
CXCL12-205ENST00000395794 CCDC174Q6PII3 467 aa16.17■□□□□ 0.18
CXCL12-205ENST00000395794 ZNF467Q7Z7K2 595 aaPredicted RBP16.17■□□□□ 0.18
CXCL12-205ENST00000395794 SYNGAP1Q96PV0 1343 aa16.17■□□□□ 0.18
CXCL12-205ENST00000395794 DNAJC25-GNG10A0A024R161 153 aa16.16■□□□□ 0.18
CXCL12-205ENST00000395794 ALAS1P13196 640 aa16.16■□□□□ 0.18
CXCL12-205ENST00000395794 AKR1A1P14550 325 aa16.16■□□□□ 0.18
CXCL12-205ENST00000395794 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.16■□□□□ 0.18
CXCL12-205ENST00000395794 AGBL1Q96MI9 1066 aa16.16■□□□□ 0.18
CXCL12-205ENST00000395794 TRERF1Q96PN7 1200 aa16.16■□□□□ 0.18
CXCL12-205ENST00000395794 GPCPD1Q9NPB8 672 aa16.16■□□□□ 0.18
CXCL12-205ENST00000395794 XPNPEP3Q9NQH7 507 aa16.16■□□□□ 0.18
CXCL12-205ENST00000395794 RNF146Q9NTX7 359 aa16.16■□□□□ 0.18
CXCL12-205ENST00000395794 ZMYND8Q9ULU4 1186 aaPredicted RBP16.16■□□□□ 0.18
CXCL12-205ENST00000395794 COL11A1P12107 1806 aaPredicted RBP16.16■□□□□ 0.18
CXCL12-205ENST00000395794 POTEB2H3BUK9 544 aa16.15■□□□□ 0.18
CXCL12-205ENST00000395794 GSPT1P15170 499 aaKnown RBP16.15■□□□□ 0.18
CXCL12-205ENST00000395794 SYDE2Q5VT97 1194 aa16.15■□□□□ 0.18
CXCL12-205ENST00000395794 MAMDC4Q6UXC1 1216 aa16.15■□□□□ 0.18
CXCL12-205ENST00000395794 RNF180Q86T96 592 aa16.15■□□□□ 0.18
CXCL12-205ENST00000395794 DGKHQ86XP1 1220 aa16.15■□□□□ 0.18
CXCL12-205ENST00000395794 KRT23Q9C075 422 aa16.15■□□□□ 0.18
CXCL12-205ENST00000395794 CNNM2Q9H8M5 875 aa16.15■□□□□ 0.18
CXCL12-205ENST00000395794 RBM27Q9P2N5 1060 aaKnown RBP16.15■□□□□ 0.18
CXCL12-205ENST00000395794 ZHX1Q9UKY1 873 aaPredicted RBP16.15■□□□□ 0.18
CXCL12-205ENST00000395794 PNMA2Q9UL42 364 aa16.15■□□□□ 0.18
CXCL12-205ENST00000395794 FAM184BQ9ULE4 1060 aa16.15■□□□□ 0.18
CXCL12-205ENST00000395794 CCPG1Q9ULG6 757 aa16.15■□□□□ 0.18
CXCL12-205ENST00000395794 NEDD4P46934 1319 aa16.15■□□□□ 0.18
CXCL12-205ENST00000395794 FRMPD2Q68DX3 1309 aaPredicted RBP16.15■□□□□ 0.18
CXCL12-205ENST00000395794 RAD50Q92878 1312 aa16.15■□□□□ 0.18
CXCL12-205ENST00000395794 KDM4AO75164 1064 aa16.14■□□□□ 0.17
CXCL12-205ENST00000395794 SLC16A2P36021 539 aa16.14■□□□□ 0.17
CXCL12-205ENST00000395794 ATN1P54259 1190 aaPredicted RBP16.14■□□□□ 0.17
CXCL12-205ENST00000395794 SNAP25P60880 206 aa16.14■□□□□ 0.17
CXCL12-205ENST00000395794 LRRC26Q2I0M4 334 aa16.14■□□□□ 0.17
CXCL12-205ENST00000395794 BTNL9Q6UXG8 535 aa16.14■□□□□ 0.17
CXCL12-205ENST00000395794 ZKSCAN3Q9BRR0 538 aa16.14■□□□□ 0.17
CXCL12-205ENST00000395794 KAT14Q9H8E8 782 aa16.14■□□□□ 0.17
CXCL12-205ENST00000395794 ZNF536O15090 1300 aa16.14■□□□□ 0.17
CXCL12-205ENST00000395794 B4E1Z4 1266 aa16.13■□□□□ 0.17
CXCL12-205ENST00000395794 ICAM1P05362 532 aa16.13■□□□□ 0.17
CXCL12-205ENST00000395794 ZNF865P0CJ78 1059 aaPredicted RBP16.13■□□□□ 0.17
CXCL12-205ENST00000395794 PDHBP11177 359 aa16.13■□□□□ 0.17
CXCL12-205ENST00000395794 TAL1P17542 331 aaPredicted RBP16.13■□□□□ 0.17
CXCL12-205ENST00000395794 SYN1P17600 705 aa16.13■□□□□ 0.17
CXCL12-205ENST00000395794 LRRC41Q15345 812 aa16.13■□□□□ 0.17
CXCL12-205ENST00000395794 GPATCH4Q5T3I0 446 aaKnown RBP16.13■□□□□ 0.17
CXCL12-205ENST00000395794 TTBK2Q6IQ55 1244 aa16.13■□□□□ 0.17
CXCL12-205ENST00000395794 RASGRP2Q7LDG7 609 aa16.13■□□□□ 0.17
CXCL12-205ENST00000395794 UBAC1Q9BSL1 405 aa16.13■□□□□ 0.17
CXCL12-205ENST00000395794 RANBP17Q9H2T7 1088 aaKnown RBP16.13■□□□□ 0.17
CXCL12-205ENST00000395794 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.13■□□□□ 0.17
CXCL12-205ENST00000395794 PRKAG2Q9UGJ0 569 aa16.13■□□□□ 0.17
CXCL12-205ENST00000395794 A0A1W2PPC1 479 aa16.12■□□□□ 0.17
CXCL12-205ENST00000395794 SNAI1O95863 264 aaPredicted RBP16.12■□□□□ 0.17
CXCL12-205ENST00000395794 CHMLP26374 656 aa16.12■□□□□ 0.17
CXCL12-205ENST00000395794 ZNF543Q08ER8 600 aa16.12■□□□□ 0.17
CXCL12-205ENST00000395794 TRDNQ13061 729 aa16.12■□□□□ 0.17
CXCL12-205ENST00000395794 ACVR2BQ13705 512 aa16.12■□□□□ 0.17
CXCL12-205ENST00000395794 ZSCAN10Q96SZ4 725 aaPredicted RBP16.12■□□□□ 0.17
CXCL12-205ENST00000395794 ABHD16BQ9H3Z7 469 aa16.12■□□□□ 0.17
CXCL12-205ENST00000395794 SPC25Q9HBM1 224 aa16.12■□□□□ 0.17
CXCL12-205ENST00000395794 A1CFQ9NQ94 594 aaKnown RBP16.12■□□□□ 0.17
CXCL12-205ENST00000395794 ASB14A6NK59 587 aa16.11■□□□□ 0.17
CXCL12-205ENST00000395794 PGK1P00558 417 aa16.11■□□□□ 0.17
CXCL12-205ENST00000395794 ADCYAP1R1P41586 468 aa16.11■□□□□ 0.17
CXCL12-205ENST00000395794 FXR1P51114 621 aaKnown RBP eCLIP16.11■□□□□ 0.17
CXCL12-205ENST00000395794 CNTN2Q02246 1040 aa16.11■□□□□ 0.17
CXCL12-205ENST00000395794 NSMFQ6X4W1 530 aa16.11■□□□□ 0.17
CXCL12-205ENST00000395794 ARMCX2Q7L311 632 aa16.11■□□□□ 0.17
CXCL12-205ENST00000395794 FAM133AQ8N9E0 248 aa16.11■□□□□ 0.17
CXCL12-205ENST00000395794 PNMA1Q8ND90 353 aa16.11■□□□□ 0.17
CXCL12-205ENST00000395794 FERMT2Q96AC1 680 aa16.11■□□□□ 0.17
CXCL12-205ENST00000395794 LBHD1Q9BQE6 289 aaPredicted RBP16.11■□□□□ 0.17
CXCL12-205ENST00000395794 ZSWIM5Q9P217 1185 aa16.11■□□□□ 0.17
CXCL12-205ENST00000395794 ATP11BQ9Y2G3 1177 aa16.11■□□□□ 0.17
CXCL12-205ENST00000395794 SNHG28P0DPA3 235 aa16.1■□□□□ 0.17
CXCL12-205ENST00000395794 RTP1P59025 263 aa16.1■□□□□ 0.17
CXCL12-205ENST00000395794 SLC39A5Q6ZMH5 540 aa16.1■□□□□ 0.17
CXCL12-205ENST00000395794 CCDC144CPQ8IYA2 1237 aa16.1■□□□□ 0.17
CXCL12-205ENST00000395794 ANKS1AQ92625 1134 aa16.1■□□□□ 0.17
CXCL12-205ENST00000395794 PRO3102Q9H379 93 aa16.1■□□□□ 0.17
CXCL12-205ENST00000395794 CYP39A1Q9NYL5 469 aa16.1■□□□□ 0.17
CXCL12-205ENST00000395794 DUSP11O75319 330 aaKnown RBP16.09■□□□□ 0.17
CXCL12-205ENST00000395794 BMP8BP34820 402 aa16.09■□□□□ 0.17
CXCL12-205ENST00000395794 MAGEA10P43363 369 aaPredicted RBP16.09■□□□□ 0.17
CXCL12-205ENST00000395794 CCDC144BQ3MJ40 725 aa16.09■□□□□ 0.17
CXCL12-205ENST00000395794 MUM1L1Q5H9M0 696 aa16.09■□□□□ 0.17
CXCL12-205ENST00000395794 NOL8Q76FK4 1167 aaKnown RBP16.09■□□□□ 0.17
CXCL12-205ENST00000395794 ENAHQ8N8S7 591 aaPredicted RBP16.09■□□□□ 0.17
CXCL12-205ENST00000395794 GDF15Q99988 308 aa16.09■□□□□ 0.17
CXCL12-205ENST00000395794 TSEN34Q9BSV6 310 aaKnown RBP16.09■□□□□ 0.17
CXCL12-205ENST00000395794 ADD3Q9UEY8 706 aaKnown RBP16.09■□□□□ 0.17
CXCL12-205ENST00000395794 PHF24Q9UPV7 400 aa16.09■□□□□ 0.17
CXCL12-205ENST00000395794 TNKSO95271 1327 aa16.09■□□□□ 0.17
CXCL12-205ENST00000395794 ZNFX1Q9P2E3 1918 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms