RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 DNAI1Q9UI46 699 aa17.42■□□□□ 0.38
CPSF7-202ENST00000394888 USP17L5A8MUK1 530 aa17.42■□□□□ 0.38
CPSF7-202ENST00000394888 CBX1P83916 185 aa17.42■□□□□ 0.38
CPSF7-202ENST00000394888 TCP11X2Q5H9J9 407 aa17.42■□□□□ 0.38
CPSF7-202ENST00000394888 MXD3Q9BW11 206 aa17.42■□□□□ 0.38
CPSF7-202ENST00000394888 PDHBP11177 359 aa17.42■□□□□ 0.38
CPSF7-202ENST00000394888 MTMR9Q96QG7 549 aa17.42■□□□□ 0.38
CPSF7-202ENST00000394888 TTI2Q6NXR4 508 aa17.41■□□□□ 0.38
CPSF7-202ENST00000394888 CRAMP1Q96RY5 1269 aa17.41■□□□□ 0.38
CPSF7-202ENST00000394888 TTYH3Q9C0H2 523 aa17.41■□□□□ 0.38
CPSF7-202ENST00000394888 MRFAP1Q9Y605 127 aa17.41■□□□□ 0.38
CPSF7-202ENST00000394888 CASP14P31944 242 aa17.41■□□□□ 0.38
CPSF7-202ENST00000394888 ARHGAP25P42331 645 aa17.41■□□□□ 0.38
CPSF7-202ENST00000394888 IGSF22Q8N9C0 903 aa17.41■□□□□ 0.38
CPSF7-202ENST00000394888 RHOBTB3O94955 611 aa17.41■□□□□ 0.38
CPSF7-202ENST00000394888 GIMAP8Q8ND71 665 aaPredicted RBP17.41■□□□□ 0.38
CPSF7-202ENST00000394888 DNAJC18Q9H819 358 aa17.41■□□□□ 0.38
CPSF7-202ENST00000394888 TMEM260Q9NX78 707 aa17.41■□□□□ 0.38
CPSF7-202ENST00000394888 GGA1Q9UJY5 639 aa17.41■□□□□ 0.38
CPSF7-202ENST00000394888 ZRANB2O95218 330 aaKnown RBP eCLIP17.4■□□□□ 0.38
CPSF7-202ENST00000394888 CLK2P49760 499 aaKnown RBP17.4■□□□□ 0.38
CPSF7-202ENST00000394888 KCNB1Q14721 858 aa17.4■□□□□ 0.38
CPSF7-202ENST00000394888 TXNRD1Q16881 649 aa17.4■□□□□ 0.38
CPSF7-202ENST00000394888 MFSD14BQ5SR56 506 aa17.4■□□□□ 0.38
CPSF7-202ENST00000394888 RSRC2Q7L4I2 434 aaKnown RBP17.4■□□□□ 0.38
CPSF7-202ENST00000394888 HEATR3Q7Z4Q2 680 aa17.4■□□□□ 0.38
CPSF7-202ENST00000394888 MKNK2Q9HBH9 465 aa17.4■□□□□ 0.38
CPSF7-202ENST00000394888 BAG3O95817 575 aa17.4■□□□□ 0.38
CPSF7-202ENST00000394888 SMARCA1P28370 1054 aa17.4■□□□□ 0.38
CPSF7-202ENST00000394888 SHROOM1Q2M3G4 852 aaPredicted RBP17.4■□□□□ 0.38
CPSF7-202ENST00000394888 SMAP1Q8IYB5 467 aaPredicted RBP17.4■□□□□ 0.38
CPSF7-202ENST00000394888 NELFBQ8WX92 580 aa17.4■□□□□ 0.38
CPSF7-202ENST00000394888 CGNQ9P2M7 1197 aaKnown RBP17.4■□□□□ 0.38
CPSF7-202ENST00000394888 GALNT17Q6IS24 598 aa17.4■□□□□ 0.38
CPSF7-202ENST00000394888 TEX11Q8IYF3 940 aa17.4■□□□□ 0.38
CPSF7-202ENST00000394888 FAM177A1Q8N128 213 aaPredicted RBP17.4■□□□□ 0.38
CPSF7-202ENST00000394888 PIGSQ96S52 555 aa17.4■□□□□ 0.38
CPSF7-202ENST00000394888 FHOD1Q9Y613 1164 aa17.4■□□□□ 0.38
CPSF7-202ENST00000394888 RGPD3A6NKT7 1758 aaPredicted RBP17.39■□□□□ 0.38
CPSF7-202ENST00000394888 RGPD4Q7Z3J3 1758 aa17.39■□□□□ 0.38
CPSF7-202ENST00000394888 AKR1B15C9JRZ8 316 aaPredicted RBP17.39■□□□□ 0.37
CPSF7-202ENST00000394888 TUBB4AP04350 444 aa17.39■□□□□ 0.37
CPSF7-202ENST00000394888 EPC1Q9H2F5 836 aa17.39■□□□□ 0.37
CPSF7-202ENST00000394888 MAPK8IP1Q9UQF2 711 aa17.39■□□□□ 0.37
CPSF7-202ENST00000394888 WDR59Q6PJI9 974 aa17.39■□□□□ 0.37
CPSF7-202ENST00000394888 ZNF397Q8NF99 534 aaPredicted RBP17.39■□□□□ 0.37
CPSF7-202ENST00000394888 MTMR4Q9NYA4 1195 aa17.39■□□□□ 0.37
CPSF7-202ENST00000394888 STX8Q9UNK0 236 aa17.39■□□□□ 0.37
CPSF7-202ENST00000394888 SLC37A4O43826 429 aa17.39■□□□□ 0.37
CPSF7-202ENST00000394888 TFRCP02786 760 aaKnown RBP17.39■□□□□ 0.37
CPSF7-202ENST00000394888 AKR1B1P15121 316 aa17.39■□□□□ 0.37
CPSF7-202ENST00000394888 SHMT1P34896 483 aa17.39■□□□□ 0.37
CPSF7-202ENST00000394888 CCT6AP40227 531 aaKnown RBP17.39■□□□□ 0.37
CPSF7-202ENST00000394888 COPB1P53618 953 aaKnown RBP17.39■□□□□ 0.37
CPSF7-202ENST00000394888 BLOC1S4Q9NUP1 217 aa17.39■□□□□ 0.37
CPSF7-202ENST00000394888 PCDHAC2Q9Y5I4 1007 aa17.39■□□□□ 0.37
CPSF7-202ENST00000394888 PAK1Q13153 545 aa17.38■□□□□ 0.37
CPSF7-202ENST00000394888 POTEDQ86YR6 584 aa17.38■□□□□ 0.37
CPSF7-202ENST00000394888 RPGRQ92834 1020 aaKnown RBP17.38■□□□□ 0.37
CPSF7-202ENST00000394888 PNMA5Q96PV4 448 aa17.38■□□□□ 0.37
CPSF7-202ENST00000394888 ABHD10Q9NUJ1 306 aa17.38■□□□□ 0.37
CPSF7-202ENST00000394888 BBOX1O75936 387 aa17.38■□□□□ 0.37
CPSF7-202ENST00000394888 PLCG1P19174 1290 aa17.38■□□□□ 0.37
CPSF7-202ENST00000394888 RRAGBQ5VZM2 374 aa17.38■□□□□ 0.37
CPSF7-202ENST00000394888 MTMR8Q96EF0 704 aa17.38■□□□□ 0.37
CPSF7-202ENST00000394888 PRDM10Q9NQV6 1147 aa17.38■□□□□ 0.37
CPSF7-202ENST00000394888 ESYT2A0FGR8 921 aa17.37■□□□□ 0.37
CPSF7-202ENST00000394888 KIAA0895Q8NCT3 520 aa17.37■□□□□ 0.37
CPSF7-202ENST00000394888 RBM17Q96I25 401 aaKnown RBP17.37■□□□□ 0.37
CPSF7-202ENST00000394888 FEZ1Q99689 392 aa17.37■□□□□ 0.37
CPSF7-202ENST00000394888 KCNJ18B7U540 433 aa17.37■□□□□ 0.37
CPSF7-202ENST00000394888 EHHADHQ08426 723 aa17.37■□□□□ 0.37
CPSF7-202ENST00000394888 KCNJ12Q14500 433 aa17.37■□□□□ 0.37
CPSF7-202ENST00000394888 ECM1Q16610 540 aa17.37■□□□□ 0.37
CPSF7-202ENST00000394888 MIIPQ5JXC2 388 aa17.37■□□□□ 0.37
CPSF7-202ENST00000394888 ZFPM1Q8IX07 1006 aa17.37■□□□□ 0.37
CPSF7-202ENST00000394888 KCNQ5Q9NR82 932 aa17.37■□□□□ 0.37
CPSF7-202ENST00000394888 GNAQP50148 359 aa17.37■□□□□ 0.37
CPSF7-202ENST00000394888 CLCN6P51797 869 aa17.37■□□□□ 0.37
CPSF7-202ENST00000394888 GRB10Q13322 594 aa17.37■□□□□ 0.37
CPSF7-202ENST00000394888 ZNF444Q8N0Y2 327 aaPredicted RBP17.37■□□□□ 0.37
CPSF7-202ENST00000394888 PLIN2Q99541 437 aa17.37■□□□□ 0.37
CPSF7-202ENST00000394888 UBA5Q9GZZ9 404 aa17.37■□□□□ 0.37
CPSF7-202ENST00000394888 TAB2Q9NYJ8 693 aa17.37■□□□□ 0.37
CPSF7-202ENST00000394888 CCDC178Q5BJE1 867 aa17.36■□□□□ 0.37
CPSF7-202ENST00000394888 P2RX7Q99572 595 aaKnown RBP17.36■□□□□ 0.37
CPSF7-202ENST00000394888 NUDT12Q9BQG2 462 aa17.36■□□□□ 0.37
CPSF7-202ENST00000394888 TRIM9Q9C026 710 aa17.36■□□□□ 0.37
CPSF7-202ENST00000394888 LAD1O00515 517 aa17.36■□□□□ 0.37
CPSF7-202ENST00000394888 CDK11BP21127 795 aaKnown RBP17.36■□□□□ 0.37
CPSF7-202ENST00000394888 SP8Q8IXZ3 490 aa17.36■□□□□ 0.37
CPSF7-202ENST00000394888 LZTS2Q9BRK4 669 aa17.36■□□□□ 0.37
CPSF7-202ENST00000394888 UBXN6Q9BZV1 441 aa17.36■□□□□ 0.37
CPSF7-202ENST00000394888 SRGNP10124 158 aa17.36■□□□□ 0.37
CPSF7-202ENST00000394888 STAT6P42226 847 aa17.36■□□□□ 0.37
CPSF7-202ENST00000394888 COBLL1Q53SF7 1204 aa17.36■□□□□ 0.37
CPSF7-202ENST00000394888 SLC27A3Q5K4L6 730 aa17.36■□□□□ 0.37
CPSF7-202ENST00000394888 APOBEC3HQ6NTF7 200 aaKnown RBP17.36■□□□□ 0.37
CPSF7-202ENST00000394888 DTHD1Q6ZMT9 781 aa17.36■□□□□ 0.37
CPSF7-202ENST00000394888 OGFRQ9NZT2 677 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms